RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TRBV6-4A0A1B0GX49 114 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 FABP12A6NFH5 140 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 A6NJ64 397 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 E7EUB6 86 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 PRKYO43930 277 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 SPAG7O75391 227 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 TMEM50AO95807 157 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 MT-CO2P00403 227 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 IGKV1-17P01599 117 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 PRH1P02810 166 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 FCER2P06734 321 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 ZNF688P0C7X2 276 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 IGLC1P0CG04 106 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 HSMCR30P0CW71 290 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 OR13C7P0DN81 318 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 DEFB130BP0DP73 79 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 DEFB130AP0DP74 79 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 HTR2BP41595 481 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 CRYBA4P53673 196 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 TCL1AP56279 114 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 HSPE1P61604 102 aaKnown RBP0.87□□□□□ -2.27
CD44-212ENST00000524922 ERHP84090 104 aaKnown RBP0.87□□□□□ -2.27
CD44-212ENST00000524922 ST3GAL4Q11206 333 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 PRR4Q16378 134 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 KRTAP6-3Q3LI67 103 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 ASB16-AS1Q495Z4 193 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 HSD17B12Q53GQ0 312 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 Q56UQ5 140 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 C10orf55Q5SWW7 151 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 CNIH2Q6PI25 160 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 GLIPR1L1Q6UWM5 242 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 SDIM1Q6ZPB5 146 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 FP248Q71RG6 208 aaPredicted RBP0.87□□□□□ -2.27
CD44-212ENST00000524922 TMED4Q7Z7H5 227 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 FAM24BQ8N5W8 94 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 C11orf72Q8NBR9 251 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 STXBP6Q8NFX7 210 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 OR11H7Q8NGC8 314 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 OR51A4Q8NGJ6 313 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 OR5H2Q8NGV7 314 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 OR4A16Q8NH70 328 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 SPACA4Q8TDM5 124 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 Q8WTZ3 238 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 TSKUQ8WUA8 353 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 IL1F10Q8WWZ1 152 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 MRPL53Q96EL3 112 aaKnown RBP0.87□□□□□ -2.27
CD44-212ENST00000524922 C5orf30Q96GV9 206 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 PGLYRP3Q96LB9 341 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 C2orf50Q96LR7 162 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 CLCC1Q96S66 551 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 TMEM208Q9BTX3 173 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 SELENOIQ9C0D9 397 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 FAM192AQ9GZU8 254 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 TMBIM4Q9HC24 238 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 PLEKHJ1Q9NW61 149 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 ARGLU1Q9NWB6 273 aaPredicted RBP0.87□□□□□ -2.27
CD44-212ENST00000524922 TAS2R1Q9NYW7 299 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 CLEC2DQ9UHP7 191 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 RABAC1Q9UI14 185 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 GNG8Q9UK08 70 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 RPH3ALQ9UNE2 315 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 RCL1Q9Y2P8 373 aaKnown RBP0.87□□□□□ -2.27
CD44-212ENST00000524922 HMCN1Q96RW7 5635 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 IGKV2-28A0A075B6P5 120 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 A0A075B6Q4 140 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 IGKV2D-24A0A075B6R9 120 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 TRAV1-1A0A0B4J248 108 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 TRAV4A0A0B4J268 109 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 TEX50A0A1B0GTY4 177 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 DAPL1A0PJW8 107 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 RBFOX3A6NFN3 312 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 KNCNA6PVL3 124 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 GGTLC3B5MD39 225 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 K7EPK0 472 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 CRTAPO75718 401 aaPredicted RBP0.86□□□□□ -2.27
CD44-212ENST00000524922 SNAPC5O75971 98 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 RPP14O95059 124 aaKnown RBP0.86□□□□□ -2.27
CD44-212ENST00000524922 CDRT1O95170 752 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 CST1P01037 141 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 IGKV2D-28P01615 120 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 IGHV3-23P01764 117 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 SLC25A5P05141 298 aaKnown RBP0.86□□□□□ -2.27
CD44-212ENST00000524922 LINC00694P0DN24 101 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 COX4I1P13073 169 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 HIST1H1DP16402 221 aaKnown RBP0.86□□□□□ -2.27
CD44-212ENST00000524922 CRISP2P16562 243 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 RPL7P18124 248 aaKnown RBP0.86□□□□□ -2.27
CD44-212ENST00000524922 GADD45AP24522 165 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 F2RP25116 425 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 ATP6V1E1P36543 226 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 CBX5P45973 191 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 GALR1P47211 349 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 CNN1P51911 297 aaKnown RBP0.86□□□□□ -2.27
CD44-212ENST00000524922 SNU13P55769 128 aaKnown RBP0.86□□□□□ -2.27
CD44-212ENST00000524922 PLP1P60201 277 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 RPS11P62280 158 aaKnown RBP eCLIP0.86□□□□□ -2.27
CD44-212ENST00000524922 RPS25P62851 125 aaKnown RBP0.86□□□□□ -2.27
CD44-212ENST00000524922 MRPS25P82663 173 aaKnown RBP0.86□□□□□ -2.27
CD44-212ENST00000524922 PDE6HQ13956 83 aa0.86□□□□□ -2.27
CD44-212ENST00000524922 GAMTQ14353 236 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 430.1 ms