RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 OR10J6PQ8NGY7 276 aa9.09□□□□□ -0.95
CCNC-216ENST00000523961 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
CCNC-216ENST00000523961 AAMDCQ9H7C9 122 aa9.09□□□□□ -0.95
CCNC-216ENST00000523961 PPP1R14DQ9NXH3 145 aa9.09□□□□□ -0.95
CCNC-216ENST00000523961 HMSDA8MTL9 139 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 BOLA2-SMG1P6H3BVE0 249 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 JTBO76095 146 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 OR10J4P0C629 311 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 RAB2AP61019 212 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 UBE2L3P68036 154 aaKnown RBP9.08□□□□□ -0.96
CCNC-216ENST00000523961 ZFAND6Q6FIF0 208 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 FAM122CQ6P4D5 195 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 ZNF705AQ6ZN79 300 aaPredicted RBP9.08□□□□□ -0.96
CCNC-216ENST00000523961 Q6ZNX1 250 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 PQLC2Q6ZP29 291 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 Q8NAQ8 132 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 FXYD5Q96DB9 178 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 ZNF503Q96F45 646 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 IGF2BP2-AS1Q96M15 143 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 GOLT1BQ9Y3E0 138 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 X6R8D5 127 aa9.08□□□□□ -0.96
CCNC-216ENST00000523961 IGHV4-28A0A0C4DH34 117 aa9.07□□□□□ -0.96
CCNC-216ENST00000523961 PRAC2D3DTV9 90 aa9.07□□□□□ -0.96
CCNC-216ENST00000523961 M0R2Z0 102 aa9.07□□□□□ -0.96
CCNC-216ENST00000523961 CDC34P49427 236 aaPredicted RBP9.07□□□□□ -0.96
CCNC-216ENST00000523961 ZNF345Q14585 488 aa9.07□□□□□ -0.96
CCNC-216ENST00000523961 ICAM4Q14773 271 aa9.07□□□□□ -0.96
CCNC-216ENST00000523961 SPINK13Q1W4C9 94 aa9.07□□□□□ -0.96
CCNC-216ENST00000523961 LYPD1Q8N2G4 141 aa9.07□□□□□ -0.96
CCNC-216ENST00000523961 NEU1Q99519 415 aa9.07□□□□□ -0.96
CCNC-216ENST00000523961 SH3BGRL3Q9H299 93 aa9.07□□□□□ -0.96
CCNC-216ENST00000523961 IGHV3OR16-12A0A075B7B8 117 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 SMIM9A6NGZ8 99 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 J3QL48 77 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 M0R3E3 92 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 DEFB4AO15263 64 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 INSP01308 110 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 RBMY1A1P0DJD3 496 aaKnown RBP9.06□□□□□ -0.96
CCNC-216ENST00000523961 RBMY1CP0DJD4 496 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 PRB4P10163 310 aaPredicted RBP9.06□□□□□ -0.96
CCNC-216ENST00000523961 RBMY1FQ15415 496 aaKnown RBP9.06□□□□□ -0.96
CCNC-216ENST00000523961 C1orf158Q8N1D5 194 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 EXOC3-AS1Q8N2X6 119 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 KCNRGQ8N5I3 272 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
CCNC-216ENST00000523961 OR11H4Q8NGC9 324 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 PHYHIPLQ96FC7 376 aa9.06□□□□□ -0.96
CCNC-216ENST00000523961 A0A0D9SG52 128 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 NPIPB6E9PJ23 425 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 CRXO43186 299 aaPredicted RBP9.05□□□□□ -0.96
CCNC-216ENST00000523961 EIF3GO75821 320 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCNC-216ENST00000523961 TSPOP30536 169 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 CDKN1BP46527 198 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 RANP62826 216 aaKnown RBP9.05□□□□□ -0.96
CCNC-216ENST00000523961 C11orf45Q8TAV5 145 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 RAB24Q969Q5 203 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 ST6GAL2Q96JF0 529 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 ODF3Q96PU9 254 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 ARPC5LQ9BPX5 153 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 TMEM208Q9BTX3 173 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 ACTR3CQ9C0K3 210 aaPredicted RBP9.05□□□□□ -0.96
CCNC-216ENST00000523961 CYTL1Q9NRR1 136 aa9.05□□□□□ -0.96
CCNC-216ENST00000523961 TMEM189A5PLL7 270 aa9.04□□□□□ -0.96
CCNC-216ENST00000523961 CXorf65A6NEN9 183 aa9.04□□□□□ -0.96
CCNC-216ENST00000523961 HMGB3O15347 200 aaKnown RBP9.04□□□□□ -0.96
CCNC-216ENST00000523961 HBE1P02100 147 aa9.04□□□□□ -0.96
CCNC-216ENST00000523961 STAG3L2P0CL84 134 aa9.04□□□□□ -0.96
CCNC-216ENST00000523961 STAG3L3P0CL85 134 aa9.04□□□□□ -0.96
CCNC-216ENST00000523961 CSN1S1P47710 185 aa9.04□□□□□ -0.96
CCNC-216ENST00000523961 BAP18Q8IXM2 172 aa9.04□□□□□ -0.96
CCNC-216ENST00000523961 LINC00477Q96M19 166 aa9.04□□□□□ -0.96
CCNC-216ENST00000523961 Q9H3A6 140 aa9.04□□□□□ -0.96
CCNC-216ENST00000523961 TRAV12-2A0A075B6T6 113 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 KANTRA0A1W2PQU2 76 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 ARL14EPLP0DKL9 152 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 LEPP41159 167 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 PMS2P11Q13670 270 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 FAM74A1Q5RGS3 127 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 AKR1C8PQ5T2L2 129 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 TCTE3Q8IZS6 198 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 TMEM256Q8N2U0 113 aa9.03□□□□□ -0.96
CCNC-216ENST00000523961 BCL2L11O43521 198 aa9.02□□□□□ -0.97
CCNC-216ENST00000523961 CXorf1O96002 111 aa9.02□□□□□ -0.97
CCNC-216ENST00000523961 CT45A10P0DMU9 189 aa9.02□□□□□ -0.97
CCNC-216ENST00000523961 ERCC8Q13216 396 aa9.02□□□□□ -0.97
CCNC-216ENST00000523961 C9orf47Q6ZRZ4 202 aa9.02□□□□□ -0.97
CCNC-216ENST00000523961 RXFP4Q8TDU9 374 aa9.02□□□□□ -0.97
CCNC-216ENST00000523961 C20orf144Q9BQM9 153 aa9.02□□□□□ -0.97
CCNC-216ENST00000523961 AGPAT4-IT1Q9H0P7 198 aa9.02□□□□□ -0.97
CCNC-216ENST00000523961 OTORQ9NRC9 128 aa9.02□□□□□ -0.97
CCNC-216ENST00000523961 hCG_2014768A0A024R1R8 64 aa9.01□□□□□ -0.97
CCNC-216ENST00000523961 IGKV2-40A0A087WW87 121 aaPredicted RBP9.01□□□□□ -0.97
CCNC-216ENST00000523961 CTXND1A0A1B0GTU2 59 aa9.01□□□□□ -0.97
CCNC-216ENST00000523961 LOC102723971A0A1B0GUV8 181 aa9.01□□□□□ -0.97
CCNC-216ENST00000523961 RBAKDNA6NC62 111 aa9.01□□□□□ -0.97
CCNC-216ENST00000523961 PGPA6NDG6 321 aa9.01□□□□□ -0.97
CCNC-216ENST00000523961 NUPR2A6NF83 97 aa9.01□□□□□ -0.97
CCNC-216ENST00000523961 IGKV2D-40P01614 121 aaPredicted RBP9.01□□□□□ -0.97
CCNC-216ENST00000523961 GCHFRP30047 84 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms