RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	TMEM230	Q96A57	120 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	FMC1	Q96HJ9	113 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	LYZL4	Q96KX0	146 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	FAM19A4	Q96LR4	140 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	SH3BGRL3	Q9H299	93 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	CST9L	Q9H4G1	147 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	SCRT2	Q9NQ03	307 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	UQCC1	Q9NVA1	299 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	ANAPC10	Q9UM13	185 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	VSIG4	Q9Y279	399 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	FLVCR1	Q9Y5Y0	555 aa		3.86	□□□□□ -1.79
PABPC1-223	ENST00000523636	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	TMEM189	A5PLL7	270 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	LINC01619	G3V211	115 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636		M0R135	149 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	PHOX2A	O14813	284 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	CCL25	O15444	150 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	SOCS1	O15524	211 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	GNG7	O60262	68 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	CTSD	P07339	412 aa	Predicted RBP	3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR5AC1	P0C628	307 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	FRMD6-AS1	P0C7T7	363 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	RPS28	P62857	69 aa	Known RBP	3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	SRPX	P78539	464 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	CCL8	P80075	99 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF266	Q14584	549 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR8B8	Q15620	311 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	IAH1	Q2TAA2	248 aa	Predicted RBP	3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	SPRN	Q5BIV9	151 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	FAM74A1	Q5RGS3	127 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF343	Q6P1L6	599 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	IL34	Q6ZMJ4	242 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	GOLT1A	Q6ZVE7	132 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	AAED1	Q7RTV5	226 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	LHFPL1	Q86WI0	220 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR13A1	Q8NGR1	328 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	BORCS8	Q96FH0	119 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF799	Q96GE5	643 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	ARHGAP5-AS1	Q96IT6	56 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	FAM218A	Q96MZ4	157 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	C18orf15	Q96N68	181 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	NABP2	Q9BQ15	211 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	PBDC1	Q9BVG4	233 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	BANF2	Q9H503	90 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	LYRM2	Q9NU23	88 aa	Predicted RBP	3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	TMEM38B	Q9NVV0	291 aa		3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	YTHDF2	Q9Y5A9	579 aa	Known RBP	3.85	□□□□□ -1.79
PABPC1-223	ENST00000523636	IGLV5-37	A0A075B6J1	123 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	IGLV9-49	A0A0B4J1Y8	123 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	IGHV1-69-2	A0A0G2JMI3	117 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636		A0A0U1RQV1	116 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	TEX50	A0A1B0GTY4	177 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF850	A8MQ14	1090 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636		J3QT63	122 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636		K7EPK0	472 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	NRAS	P01111	189 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	IGKV3-15	P01624	115 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	IGLV3-1	P01715	115 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF728	P0DKX0	622 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR5H8	P0DN80	308 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF14	P17017	642 aa	Predicted RBP	3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	APLNR	P35414	380 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	MYCNOS	P40205	109 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	MDH2	P40926	338 aa	Known RBP	3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	KIR2DS2	P43631	304 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	THBS3	P49746	956 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	EMP1	P54849	157 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	FGF12	P61328	243 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	HBG1	P69891	147 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	HBG2	P69892	147 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	RPL24	P83731	157 aa	Known RBP	3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	DEFA5	Q01523	94 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	PRDX4	Q13162	271 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	ENDOG	Q14249	297 aa	Known RBP	3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	RHEB	Q15382	184 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	HMGN3	Q15651	99 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636		Q6ZN92	141 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	FAM71E2	Q8N5Q1	922 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF114	Q8NC26	417 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR11H6	Q8NGC7	330 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR1N2	Q8NGR9	330 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	PCNP	Q8WW12	178 aa	Known RBP	3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	OR5P3	Q8WZ94	311 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	ACY3	Q96HD9	319 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	AQP10	Q96PS8	301 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	TP53RK	Q96S44	253 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	RNF126	Q9BV68	326 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	TMEM100	Q9NV29	134 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	KCNIP1	Q9NZI2	227 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNRD1	Q9P1U0	126 aa		3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	ZNF230	Q9UIE0	474 aa	Predicted RBP	3.84	□□□□□ -1.79
PABPC1-223	ENST00000523636	DNAH8	Q96JB1	4490 aa		3.83	□□□□□ -1.8
PABPC1-223	ENST00000523636	IGKV3D-15	A0A087WSY6	115 aa		3.83	□□□□□ -1.8
PABPC1-223	ENST00000523636	IGKV1-9	A0A0C4DH69	117 aa		3.83	□□□□□ -1.8
PABPC1-223	ENST00000523636	hADV38S2	A0JD32	116 aa		3.83	□□□□□ -1.8
PABPC1-223	ENST00000523636	MRPL33	O75394	65 aa	Known RBP	3.83	□□□□□ -1.8
PABPC1-223	ENST00000523636	APOA2	P02652	100 aa		3.83	□□□□□ -1.8
PABPC1-223	ENST00000523636	RPL7	P18124	248 aa	Known RBP	3.83	□□□□□ -1.8
PABPC1-223	ENST00000523636	HERV-K104	P61576	105 aa		3.83	□□□□□ -1.8
PABPC1-223	ENST00000523636	FAM201A	Q5SY85	155 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms