RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 IGKV1-13P0DP09 117 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF32P17041 273 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 COX7A1P24310 79 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 F2RP25116 425 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 KIR2DS4P43632 304 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 CEBPDP49716 269 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 PSMB3P49720 205 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 GPM6AP51674 278 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 FGF12P61328 243 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 MEF2CQ06413 473 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 SMAGPQ0VAQ4 97 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 DAZ2Q13117 558 aaKnown RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 EIF4EBP1Q13541 118 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 KIR2DS1Q14954 304 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 TNXAQ16473 311 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 CEACAM16Q2WEN9 425 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 TMEM97Q5BJF2 176 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 KLF17Q5JT82 389 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 CASC10Q5T4H9 136 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 PRAMEF5Q5TYX0 476 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 LINC01545Q5VT33 79 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 PRAMEF6Q5VXH4 476 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 PLCXD3Q63HM9 321 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 SLC25A34Q6PIV7 304 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 IGFL2Q6UWQ7 119 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 Q6ZS92 163 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 LINC00173Q6ZV60 143 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 GTF2H5Q6ZYL4 71 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 BAGE3Q86Y29 109 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 BAGE2Q86Y30 109 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR8I2Q8N0Y5 310 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 ATOH7Q8N100 152 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 FAM19A2Q8N3H0 131 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR2K2Q8NGT1 345 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR10D3Q8NH80 312 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR1L1Q8NH94 360 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 VSTM2AQ8TAG5 236 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 PIFOQ8TCI5 191 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF418Q8TF45 676 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 LRRC29Q8WV35 223 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 H1FXQ92522 213 aaKnown RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 RDH5Q92781 318 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 SAMD10Q9BYL1 202 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR2D2Q9H210 308 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 GEMIN7Q9H840 131 aaKnown RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 DAZ3Q9NR90 486 aaKnown RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 OSTCQ9NRP0 149 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 MRPL16Q9NX20 251 aaKnown RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 MTCH1Q9NZJ7 389 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 CLCF1Q9UBD9 225 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 ERG28Q9UKR5 140 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 WASHC3Q9Y3C0 194 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 MPC1Q9Y5U8 109 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 ARL2-SNX15V9GYD0 113 aa2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 RAI1Q7Z5J4 1906 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P41-201ENST00000520234 IGHV3-15A0A0B4J1V0 119 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 A0A0G2JLM5 398 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR4C46A6NHA9 309 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 SLC17A3O00476 420 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 ISLRO14498 428 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 SIVA1O15304 175 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 SYNGR2O43760 224 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 ANGPTL7O43827 346 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 CXCL13O43927 109 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 MRPL33O75394 65 aaKnown RBP2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 APCSP02743 223 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 STAG3L2P0CL84 134 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 CCL4P13236 92 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 S100GP29377 79 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 SRIP30626 198 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 OTX2P32243 289 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 LEPP41159 167 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 ATP5G3P48201 142 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 GNG3P63215 75 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 GABRA6Q16445 453 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 PIGYQ3MUY2 71 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q6P435 159 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF818PQ6ZRF7 136 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF695Q8IW36 515 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 Q8IYB0 196 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 TTC9CQ8N5M4 171 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 ZNF645Q8N7E2 425 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 NKAPP1Q8N9T2 125 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 C20orf203Q8NBC4 194 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR10AG1Q8NH19 301 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 OR2AE1Q8NHA4 323 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 BLNKQ8WV28 456 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 PIGCQ92535 297 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 GALMQ96C23 342 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 IGF2BP2-AS1Q96M15 143 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 PMCHL2Q9BQD1 86 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 CHRDL1Q9BU40 450 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 TMEM70Q9BUB7 260 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 NPCDR1Q9BY65 106 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 FGF23Q9GZV9 251 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 SLC25A22Q9H936 323 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 SLC39A9Q9NUM3 307 aa2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 YTHDF2Q9Y5A9 579 aaKnown RBP2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 TSSC4Q9Y5U2 329 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P41-201ENST00000520234 DSCAML1Q8TD84 2053 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms