RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TIMM9Q9Y5J7 89 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RYR3Q15413 4870 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 LOC102724200A0A096LPH7 203 aaPredicted RBP4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 A0A1W2PPV4 95 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RBMY1BA6NDE4 496 aaKnown RBP4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RBMY1EA6NEQ0 496 aaKnown RBP4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 H3BTX0 84 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 EIF3GO75821 320 aaKnown RBP eCLIP4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 MBP02144 154 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 C1QBP02746 253 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RBMY1DP0C7P1 496 aaKnown RBP4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RPL35AP18077 110 aaKnown RBP4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 MEOX2P50222 304 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RHOBP62745 196 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 CD300CQ08708 224 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ZNF345Q14585 488 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ODF3L2Q3SX64 289 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 LGALSLQ3ZCW2 172 aaPredicted RBP4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 MORN5Q5VZ52 161 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SPATA31B1PQ5VZV4 182 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 FAM122CQ6P4D5 195 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TMUB2Q71RG4 321 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 MIR17HGQ75NE6 70 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR10G4Q8NGN3 311 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR10G9Q8NGN4 311 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR10G7Q8NGN6 311 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 GNPNAT1Q96EK6 184 aaPredicted RBP4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 HYLS1Q96M11 299 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 C17orf77Q96MU5 243 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ZNF471Q9BX82 626 aaPredicted RBP4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR51M1Q9H341 326 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 CYTL1Q9NRR1 136 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 FUT9Q9Y231 359 aa4.29□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TRAV34A0A0B4J273 112 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 KNCNA6PVL3 124 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 H3BQ15 152 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ISLRO14498 428 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 MRPS12O15235 138 aaKnown RBP4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 HMGB3O15347 200 aaKnown RBP4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 BCL2L11O43521 198 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR7C2O60412 319 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR10J4P0C629 311 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PYYP10082 97 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SPP1P10451 314 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 M6PRP20645 277 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TAS2R45P59539 299 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RAB2AP61019 212 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 EIF5AP63241 154 aaKnown RBP4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SERF2P84101 59 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ZFP69Q49AA0 526 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ACTL10Q5JWF8 245 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 AKR1C8PQ5T2L2 129 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SAMD13Q5VXD3 122 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SBSPONQ8IVN8 264 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 STHQ8IWL8 128 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 BLNKQ8WV28 456 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 B9D2Q9BPU9 175 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PSMG3Q9BT73 122 aaPredicted RBP4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PAXXQ9BUH6 204 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ACTR3CQ9C0K3 210 aaPredicted RBP4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SH3BGRL3Q9H299 93 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ZNF586Q9NXT0 402 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TMEM14CQ9P0S9 112 aa4.28□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TRAV8-2A0A0B4J237 113 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 GAGE12JA6NER3 117 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 F6UB75 175 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SOCS3O14543 225 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 IGKV3-20P01619 116 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 NBEAP1P0C6P0 100 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 IGLC2P0DOY2 106 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PRB4P10163 310 aaPredicted RBP4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 HIST1H1EP10412 219 aaKnown RBP4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 VPREB1P12018 145 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 C4BPBP20851 252 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 HLA-DMBP28068 263 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 CDC34P49427 236 aaPredicted RBP4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PSMB3P49720 205 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 DEFB1P60022 68 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PSG9Q00887 426 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 PSG3Q16557 428 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 GUK1Q16774 197 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 HAGHQ16775 308 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 TMEM41BQ5BJD5 291 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 EBLN2Q6P2I7 272 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 LCN15Q6UWW0 184 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RPP25LQ8N5L8 163 aaKnown RBP4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RNF182Q8N6D2 247 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ZNF738Q8NE65 137 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 OR4B1Q8NGF8 309 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 FAM167A-AS1Q96KT0 104 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 CSTL1Q9H114 145 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 RPRMQ9NS64 109 aa4.27□□□□□ -1.73
SCARNA6.1-201ENST00000516989 TRBV19A0A075B6N1 114 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 A0A087X0K7 114 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 ZNF705FA8MVS1 300 aaPredicted RBP4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SLC17A3O00476 420 aa4.26□□□□□ -1.73
SCARNA6.1-201ENST00000516989 SEC11BP0C7V7 166 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms