RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 C17orf112F2Z3M2 114 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 BOLA2-SMG1P6H3BVE0 249 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 IFNA5P01569 189 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 HBE1P02100 147 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 SPART-AS1P0CW21 52 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 EMP1P54849 157 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 ZNF767PQ75MW2 155 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 LINC00476Q8WZB0 136 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 PPP1R14DQ9NXH3 145 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
PDLIM5-212ENST00000509333 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
PDLIM5-212ENST00000509333 RRN3P1Q2M238 152 aa11.53□□□□□ -0.56
PDLIM5-212ENST00000509333 PARD6GQ9BYG4 376 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-212ENST00000509333 OR51M1Q9H341 326 aa11.53□□□□□ -0.56
PDLIM5-212ENST00000509333 KCNIP2Q9NS61 270 aa11.53□□□□□ -0.56
PDLIM5-212ENST00000509333 DKK2Q9UBU2 259 aa11.53□□□□□ -0.56
PDLIM5-212ENST00000509333 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
PDLIM5-212ENST00000509333 FUT9Q9Y231 359 aa11.53□□□□□ -0.56
PDLIM5-212ENST00000509333 VPS13DQ5THJ4 4388 aa11.53□□□□□ -0.56
PDLIM5-212ENST00000509333 TRAV10A0A0B4J240 114 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 ZNF705GA8MUZ8 300 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 IGLL5B9A064 214 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 LY6G6CO95867 125 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 CT45A10P0DMU9 189 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 AZU1P20160 251 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 TCTAP57738 103 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 PDE6HQ13956 83 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 KIR3DS1Q14943 382 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 OXA1LQ15070 435 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 BAP18Q8IXM2 172 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 RPP25LQ8N5L8 163 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 OR10J6PQ8NGY7 276 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 BLNKQ8WV28 456 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 RNF141Q8WVD5 230 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 LINC01587Q99440 93 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 TMEM208Q9BTX3 173 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 PRELID1Q9Y255 219 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 TIMM9Q9Y5J7 89 aa11.52□□□□□ -0.57
PDLIM5-212ENST00000509333 LOC102723971A0A1B0GUV8 181 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 M0R3E3 92 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 INSP01308 110 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 CDKN1BP46527 198 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 RGS21Q2M5E4 152 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 FAM222AQ5U5X8 452 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 LGALS9CQ6DKI2 356 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 EXOC3-AS1Q8N2X6 119 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 ZNF503Q96F45 646 aa11.51□□□□□ -0.57
PDLIM5-212ENST00000509333 DEFB131BA0A096LNP1 70 aa11.5□□□□□ -0.57
PDLIM5-212ENST00000509333 NPIPB6E9PJ23 425 aa11.5□□□□□ -0.57
PDLIM5-212ENST00000509333 GIPP09681 153 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-212ENST00000509333 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
PDLIM5-212ENST00000509333 AQP10Q96PS8 301 aa11.5□□□□□ -0.57
PDLIM5-212ENST00000509333 PAXXQ9BUH6 204 aa11.5□□□□□ -0.57
PDLIM5-212ENST00000509333 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
PDLIM5-212ENST00000509333 YTHDF2Q9Y5A9 579 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-212ENST00000509333 TSPOP30536 169 aa11.49□□□□□ -0.57
PDLIM5-212ENST00000509333 ICAM4Q14773 271 aa11.49□□□□□ -0.57
PDLIM5-212ENST00000509333 TMEM256Q8N2U0 113 aa11.49□□□□□ -0.57
PDLIM5-212ENST00000509333 ASB13Q8WXK3 278 aa11.49□□□□□ -0.57
PDLIM5-212ENST00000509333 LINC00477Q96M19 166 aa11.49□□□□□ -0.57
PDLIM5-212ENST00000509333 NIPSNAP3BQ9BS92 247 aa11.49□□□□□ -0.57
PDLIM5-212ENST00000509333 KMT2AQ03164 3969 aa11.49□□□□□ -0.57
PDLIM5-212ENST00000509333 OR10J4P0C629 311 aa11.48□□□□□ -0.57
PDLIM5-212ENST00000509333 TAS2R60P59551 318 aa11.48□□□□□ -0.57
PDLIM5-212ENST00000509333 ERCC8Q13216 396 aa11.48□□□□□ -0.57
PDLIM5-212ENST00000509333 ODF3Q96PU9 254 aa11.48□□□□□ -0.57
PDLIM5-212ENST00000509333 PLAC8L1A1L4L8 177 aa11.47□□□□□ -0.57
PDLIM5-212ENST00000509333 C9orf47Q6ZRZ4 202 aa11.47□□□□□ -0.57
PDLIM5-212ENST00000509333 FAM19A4Q96LR4 140 aa11.47□□□□□ -0.57
PDLIM5-212ENST00000509333 C20orf144Q9BQM9 153 aa11.47□□□□□ -0.57
PDLIM5-212ENST00000509333 AAMDCQ9H7C9 122 aa11.47□□□□□ -0.57
PDLIM5-212ENST00000509333 IGHV4-4A0A075B6R2 117 aa11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 TEX48A0A1B0GUV7 120 aa11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 H7BYZ3 331 aa11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 EIF3GO75821 320 aaKnown RBP eCLIP11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 M6PRP20645 277 aa11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 RANP62826 216 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 ACOT6Q3I5F7 207 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 GFI1BQ5VTD9 330 aa11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 LYPD1Q8N2G4 141 aa11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 VGLL1Q99990 258 aa11.46□□□□□ -0.57
PDLIM5-212ENST00000509333 OR7C2O60412 319 aa11.45□□□□□ -0.58
PDLIM5-212ENST00000509333 HTN1P15515 57 aa11.45□□□□□ -0.58
PDLIM5-212ENST00000509333 LEPP41159 167 aa11.45□□□□□ -0.58
PDLIM5-212ENST00000509333 ZNF493Q6ZR52 646 aa11.45□□□□□ -0.58
PDLIM5-212ENST00000509333 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
PDLIM5-212ENST00000509333 PHYHIPLQ96FC7 376 aa11.45□□□□□ -0.58
PDLIM5-212ENST00000509333 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 LYRM9A8MSI8 78 aa11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 G3V3Q6 166 aa11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 ZNF324O75467 553 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 TAS2R45P59539 299 aa11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 ZNF266Q14584 549 aa11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 FAM122CQ6P4D5 195 aa11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 OR10G4Q8NGN3 311 aa11.44□□□□□ -0.58
PDLIM5-212ENST00000509333 OR10G9Q8NGN4 311 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms