RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 PATE2Q6UY27 113 aa4.71□□□□□ -1.66
LINC01340-201ENST00000504012 Q6ZQT7 251 aa4.71□□□□□ -1.66
LINC01340-201ENST00000504012 DTX2Q86UW9 622 aa4.71□□□□□ -1.66
LINC01340-201ENST00000504012 LYPD1Q8N2G4 141 aa4.71□□□□□ -1.66
LINC01340-201ENST00000504012 C10orf126Q8N4M7 172 aa4.71□□□□□ -1.66
LINC01340-201ENST00000504012 Q8N8P6 123 aa4.71□□□□□ -1.66
LINC01340-201ENST00000504012 C11orf44Q8N8P7 122 aa4.71□□□□□ -1.66
LINC01340-201ENST00000504012 TMEM75Q8N9X5 138 aa4.71□□□□□ -1.66
LINC01340-201ENST00000504012 TIMM8BQ9Y5J9 83 aaPredicted RBP4.71□□□□□ -1.66
LINC01340-201ENST00000504012 CEP192Q8TEP8 1941 aa4.71□□□□□ -1.66
LINC01340-201ENST00000504012 SPAG17Q6Q759 2223 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 H0Y8X5 98 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 H3BT86 120 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 K7EMI3 77 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 UPK2O00526 184 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 ZFAND5O76080 213 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 RNASE2P10153 161 aaKnown RBP4.7□□□□□ -1.66
LINC01340-201ENST00000504012 COX7CP15954 63 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 CKS2P33552 79 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 LEPP41159 167 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 TNFRSF4P43489 277 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 TMEM258P61165 79 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 PPP1CAP62136 330 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 ATXN8Q156A1 80 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 APRG1Q8IVJ8 170 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 STHQ8IWL8 128 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 AMN1Q8IY45 258 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 ZCCHC24Q8N2G6 241 aaKnown RBP4.7□□□□□ -1.66
LINC01340-201ENST00000504012 MBD3L2Q8NHZ7 208 aaPredicted RBP4.7□□□□□ -1.66
LINC01340-201ENST00000504012 IGFBPL1Q8WX77 278 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 SRSF12Q8WXF0 261 aaKnown RBP4.7□□□□□ -1.66
LINC01340-201ENST00000504012 ZNF837Q96EG3 531 aaPredicted RBP4.7□□□□□ -1.66
LINC01340-201ENST00000504012 FOXC2Q99958 501 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 PRO1854Q9UHT4 67 aa4.7□□□□□ -1.66
LINC01340-201ENST00000504012 IGLV3-12A0A075B6K2 115 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 TRAV40A0A0B4J280 105 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 LOC389332A0A1B0GUA5 103 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 C10orf142B7Z368 130 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 F8VRH5 84 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 K7EM74 188 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 K7ENP7 123 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 PROP1O75360 226 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 IGLV2-11P01706 119 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 CD3EP07766 207 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 PYYP10082 97 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 CNTFRP26992 372 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 LOXL3P58215 753 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 GNG5P63218 68 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 PAPPA-AS1Q5QFB9 102 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 GAGE2AQ6NT46 116 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 SEM1Q6ZVN7 128 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 AAED1Q7RTV5 226 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 CHCHD5Q9BSY4 110 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 CNFNQ9BYD5 112 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 TTTY13Q9BZ97 58 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 ZNF71Q9NQZ8 489 aaPredicted RBP4.69□□□□□ -1.66
LINC01340-201ENST00000504012 CALYQ9NYX4 217 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 MRPL35Q9NZE8 188 aaKnown RBP4.69□□□□□ -1.66
LINC01340-201ENST00000504012 PRO0628Q9UI54 55 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 ADAMTS20P59510 1910 aa4.69□□□□□ -1.66
LINC01340-201ENST00000504012 TANC2Q9HCD6 1990 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 IGLV2-18A0A075B6J9 118 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 TRAV8-1A0A0A6YYK1 113 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 TRAV3A0A0B4J244 114 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 A0A0B4J2C4 111 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 LOC107984640A0A0U1RRK4 108 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 NDUFC2-KCTD14E9PQ53 114 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 H3BMM0 161 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 H3BVH4 76 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 RPL11P62913 178 aaKnown RBP4.68□□□□□ -1.66
LINC01340-201ENST00000504012 ERHP84090 104 aaKnown RBP4.68□□□□□ -1.66
LINC01340-201ENST00000504012 TMEM30BQ3MIR4 351 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 LINC01620Q4KN68 170 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 MORN5Q5VZ52 161 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 PVRIGQ6DKI7 326 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 SDIM1Q6ZPB5 146 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 TRPT1Q86TN4 253 aaKnown RBP4.68□□□□□ -1.66
LINC01340-201ENST00000504012 LINC00643Q86TS7 51 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 NTN5Q8WTR8 489 aaPredicted RBP4.68□□□□□ -1.66
LINC01340-201ENST00000504012 PATE1Q8WXA2 126 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 UBE2WQ96B02 151 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 DPH3Q96FX2 82 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 Q9H3A6 140 aa4.68□□□□□ -1.66
LINC01340-201ENST00000504012 TRAV17A0A0B4J275 112 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 A0A0J9YW62 118 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 TRBV30A0A0K0K1B3 111 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 LINC01548A6NM66 108 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 ATOX1O00244 68 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 TRACP01848 142 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 CFC1BP0CG36 223 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 CFC1P0CG37 223 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 GP9P14770 177 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 COX6B1P14854 86 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 SRSF9Q13242 221 aaKnown RBP eCLIP4.67□□□□□ -1.66
LINC01340-201ENST00000504012 LAGE3Q14657 143 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 LYZL1Q6UWQ5 148 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 LINC00305Q7Z4B0 112 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 C5orf38Q86SI9 138 aa4.67□□□□□ -1.66
LINC01340-201ENST00000504012 WFDC3Q8IUB2 231 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms