RNA–Protein interactions for RNA: ENST00000503393.6

SH3BP2-207, Transcript of SH3 domain binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SH3BP2, Length 9,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-207ENST00000503393 CACNA1AO00555 2505 aa12.74□□□□□ -0.37
SH3BP2-207ENST00000503393 C9orf139Q6ZV77 190 aa12.74□□□□□ -0.37
SH3BP2-207ENST00000503393 ERCC8Q13216 396 aa12.74□□□□□ -0.37
SH3BP2-207ENST00000503393 BVES-AS1Q5T3Y7 98 aa12.74□□□□□ -0.37
SH3BP2-207ENST00000503393 RNASE6Q93091 150 aaKnown RBP12.74□□□□□ -0.37
SH3BP2-207ENST00000503393 ZNF625Q96I27 306 aaPredicted RBP12.74□□□□□ -0.37
SH3BP2-207ENST00000503393 CFHR2P36980 270 aa12.74□□□□□ -0.37
SH3BP2-207ENST00000503393 YPEL3P61236 119 aaPredicted RBP12.74□□□□□ -0.37
SH3BP2-207ENST00000503393 RNF5Q99942 180 aa12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 C2orf16Q68DN1 1984 aa12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 H0YJW9 148 aa12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 PRB4P10163 310 aaPredicted RBP12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 A0A0G2JRQ6 117 aa12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 RPL36AP83881 106 aaKnown RBP12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 RPL36ALQ969Q0 106 aaKnown RBP12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 RCHY1Q96PM5 261 aa12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 IGHV1-46P01743 117 aa12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 TRACP01848 142 aa12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 VDAC2P45880 294 aaPredicted RBP12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 CYYR1Q96J86 154 aa12.73□□□□□ -0.37
SH3BP2-207ENST00000503393 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 SMIM27A0A1W2PRY6 76 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 SOCS3O14543 225 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 PRADC1Q9BSG0 188 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 SPRR3Q9UBC9 169 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 H3BMG7 143 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 ZNF415Q09FC8 603 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 C6orf226Q5I0X4 101 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 ZNF492Q9P255 531 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 HTN3P15516 51 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 LGALS9BQ3B8N2 356 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 TMEM200BQ69YZ2 307 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 LGALS9CQ6DKI2 356 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 Q6P435 159 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 CEND1Q8N111 149 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 SLX1AQ9BQ83 275 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 PRSS22Q9GZN4 317 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 IGHV1-8P0DP01 117 aa12.72□□□□□ -0.37
SH3BP2-207ENST00000503393 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.37
SH3BP2-207ENST00000503393 PRSS57Q6UWY2 283 aa12.71□□□□□ -0.37
SH3BP2-207ENST00000503393 VWCEQ96DN2 955 aa12.71□□□□□ -0.37
SH3BP2-207ENST00000503393 IGHV1-3A0A0C4DH29 117 aa12.71□□□□□ -0.37
SH3BP2-207ENST00000503393 FGF6P10767 208 aa12.71□□□□□ -0.37
SH3BP2-207ENST00000503393 COLQQ9Y215 455 aaPredicted RBP12.71□□□□□ -0.37
SH3BP2-207ENST00000503393 TCF15Q12870 199 aa12.71□□□□□ -0.38
SH3BP2-207ENST00000503393 PRO1854Q9UHT4 67 aa12.71□□□□□ -0.38
SH3BP2-207ENST00000503393 EFNA2O43921 213 aa12.71□□□□□ -0.38
SH3BP2-207ENST00000503393 RNASE2P10153 161 aaKnown RBP12.71□□□□□ -0.38
SH3BP2-207ENST00000503393 A0A087WX48 190 aa12.71□□□□□ -0.38
SH3BP2-207ENST00000503393 WNT2P09544 360 aa12.71□□□□□ -0.38
SH3BP2-207ENST00000503393 PRSS46E5RG02 174 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 V9GYV3 84 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 IGHV3-73A0A0B4J1V6 119 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 SIVA1O15304 175 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 SRSF8Q9BRL6 282 aaKnown RBP12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 TMEM14BQ9NUH8 114 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 GAGE12JA6NER3 117 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 GAGE7O76087 117 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 GAGE12FP0CL80 117 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 GAGE12GP0CL81 117 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 GAGE12IP0CL82 117 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 GAGE4Q13068 117 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 WFDC12Q8WWY7 111 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 C1orf159Q96HA4 380 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 SIGLEC9Q9Y336 463 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 IL18BPO95998 194 aa12.7□□□□□ -0.38
SH3BP2-207ENST00000503393 TMEM141Q96I45 108 aa12.69□□□□□ -0.38
SH3BP2-207ENST00000503393 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
SH3BP2-207ENST00000503393 TRAV41A0A0B4J266 112 aa12.69□□□□□ -0.38
SH3BP2-207ENST00000503393 UTF1Q5T230 341 aa12.69□□□□□ -0.38
SH3BP2-207ENST00000503393 DEFB104AQ8WTQ1 72 aa12.69□□□□□ -0.38
SH3BP2-207ENST00000503393 UBL5Q9BZL1 73 aa12.69□□□□□ -0.38
SH3BP2-207ENST00000503393 FAM231DQ6ZW35 169 aa12.69□□□□□ -0.38
SH3BP2-207ENST00000503393 RNF144BQ7Z419 303 aa12.69□□□□□ -0.38
SH3BP2-207ENST00000503393 CD177Q8N6Q3 437 aa12.69□□□□□ -0.38
SH3BP2-207ENST00000503393 A0A1W2PRX2 142 aa12.68□□□□□ -0.38
SH3BP2-207ENST00000503393 TANC1Q9C0D5 1861 aa12.68□□□□□ -0.38
SH3BP2-207ENST00000503393 C5orf64Q2M2E5 130 aa12.68□□□□□ -0.38
SH3BP2-207ENST00000503393 VGLL1Q99990 258 aa12.68□□□□□ -0.38
SH3BP2-207ENST00000503393 HLA-DMBP28068 263 aa12.68□□□□□ -0.38
SH3BP2-207ENST00000503393 PMVKQ15126 192 aa12.68□□□□□ -0.38
SH3BP2-207ENST00000503393 C1QTNF4Q9BXJ3 329 aa12.68□□□□□ -0.38
SH3BP2-207ENST00000503393 KIAA1549LQ6ZVL6 1849 aa12.68□□□□□ -0.38
SH3BP2-207ENST00000503393 TAL2Q16559 108 aa12.68□□□□□ -0.38
SH3BP2-207ENST00000503393 NUP210Q8TEM1 1887 aaPredicted RBP12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 IGKV1-16P04430 117 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 THBDP07204 575 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 SLC25A16P16260 332 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 GAGE5Q13069 117 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 GAGE6Q13070 117 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 ANKHD1Q8IWZ3 2542 aaKnown RBP12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 MINOS1Q5TGZ0 78 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 MINOS1-NBL1R4GNA1 71 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 Q8N8P6 123 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 TP53TG1Q9Y2A0 90 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 SHANK2-AS3Q9BTD1 123 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 KIR2DL5BA0A0G2JN68 375 aa12.67□□□□□ -0.38
SH3BP2-207ENST00000503393 KIR2DL5BA0A0G2JPC4 375 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms