RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 C5orf67F2Z3F1 127 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 K7ERJ3 54 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 CD14P08571 375 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 ZNF137PP52743 207 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 TCTAP57738 103 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 SPINK7P58062 85 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 C1orf140Q5VVS0 124 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 Q6ZQY7 126 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 TSKUQ8WUA8 353 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 BIN3Q9NQY0 253 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 JPT1Q9UK76 154 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 UFC1Q9Y3C8 167 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 RTL9Q8NET4 1388 aa0.45□□□□□ -2.34
PSPC1-205ENST00000497722 PIAS1O75925 651 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 MT-ND6P03923 174 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 S100A5P33763 92 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 CRYBA4P53673 196 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 TAS2R41P59536 307 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 FXYD4P59646 89 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 MSMO1Q15800 293 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 LTC4SQ16873 150 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 OCIAD2Q56VL3 154 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 PPP1R2P3Q6NXS1 205 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 OR2H1Q9GZK4 316 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 TECPR2O15040 1411 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 ERBINQ96RT1 1412 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 KIAA1107Q9UPP5 1409 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 TRAPPC8Q9Y2L5 1435 aa0.44□□□□□ -2.34
PSPC1-205ENST00000497722 CITO14578 2027 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 C5orf58C9J3I9 102 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 PPP5D1E7EU14 171 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 CST7O76096 145 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 SERPINB1P30740 379 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 GNG10P50151 68 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 DIAPH2-AS1Q14236 149 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 RTL8BQ17RB0 113 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 TMEM78Q5T7P6 136 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 FKBP1CQ5VVH2 108 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 GLIPR1L1Q6UWM5 242 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 LINC00299Q6ZSB3 139 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 PRR15Q8IV56 129 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 FAM216BQ8N7L0 139 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 CARD19Q96LW7 228 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 GID8Q9NWU2 228 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 SMPXQ9UHP9 88 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 TPRKBQ9Y3C4 175 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 UNC13CQ8NB66 2214 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 NUP210Q8TEM1 1887 aaPredicted RBP0.43□□□□□ -2.34
PSPC1-205ENST00000497722 USP54Q70EL1 1684 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 PBRM1Q86U86 1689 aa0.43□□□□□ -2.34
PSPC1-205ENST00000497722 FREM3P0C091 2139 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 IDO1P14902 403 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 GLRXP35754 106 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 RPL35P42766 123 aaKnown RBP0.42□□□□□ -2.34
PSPC1-205ENST00000497722 HBBP68871 147 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 C3orf33Q6P1S2 294 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 ATOH7Q8N100 152 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 STX19Q8N4C7 294 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 C5orf17Q8NAS9 161 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 CCL4L1Q8NHW4 92 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 AP1S3Q96PC3 154 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 CST11Q9H112 138 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 LAMTOR3Q9UHA4 124 aa0.42□□□□□ -2.34
PSPC1-205ENST00000497722 TCOF1Q13428 1488 aaKnown RBP0.41□□□□□ -2.34
PSPC1-205ENST00000497722 KIAA1549LQ6ZVL6 1849 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 PTPRDP23468 1912 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 A0A0D9SG42 100 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 TRDV1A0A1B0GX56 115 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 G0S2P27469 103 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 FOXA3P55318 350 aaPredicted RBP0.41□□□□□ -2.34
PSPC1-205ENST00000497722 MIR22HGQ0VDD5 57 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 NEDD8Q15843 81 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 TRIQKQ629K1 86 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 CASC2Q6XLA1 102 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 GRPEL2Q8TAA5 225 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 EFCAB11Q9BUY7 163 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 LRTM1Q9HBL6 345 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 OTORQ9NRC9 128 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 PLAC8Q9NZF1 115 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 MED11Q9P086 117 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 NUBP2Q9Y5Y2 271 aa0.41□□□□□ -2.34
PSPC1-205ENST00000497722 H3BQV1 296 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 H7BYZ3 331 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 K7EIL1 84 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 IGHV3-33P01772 117 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 QRFPP83859 136 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 FOXI2Q6ZQN5 318 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 LINC00269Q8N2A0 174 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 DYDC1Q8WWB3 177 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 DIRC1Q969H9 104 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 BORCS8Q96FH0 119 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 MCEEQ96PE7 176 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 OR4C12Q96R67 309 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 PCBD2Q9H0N5 130 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 CENPHQ9H3R5 247 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 TAF9BQ9HBM6 251 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 FANCMQ8IYD8 2048 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 TET1Q8NFU7 2136 aa0.4□□□□□ -2.35
PSPC1-205ENST00000497722 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms