RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 UHRF2Q96PU4 802 aa6.91□□□□□ -1.3
TMEM39A-210ENST00000490099 ARPC5LQ9BPX5 153 aa6.91□□□□□ -1.3
TMEM39A-210ENST00000490099 NIPSNAP3BQ9BS92 247 aa6.91□□□□□ -1.3
TMEM39A-210ENST00000490099 ARL6Q9H0F7 186 aa6.91□□□□□ -1.3
TMEM39A-210ENST00000490099 RNF24Q9Y225 148 aa6.91□□□□□ -1.3
TMEM39A-210ENST00000490099 FRAS1Q86XX4 4008 aa6.91□□□□□ -1.3
TMEM39A-210ENST00000490099 BORCS7-ASMTA0A0B4J1R7 106 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 SMCO3A2RU48 225 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 AGPAT2O15120 278 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 BCL2L11O43521 198 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 CST7O76096 145 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 HBE1P02100 147 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 OR5G3P0C626 314 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 CXCL2P19875 107 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 B2MP61769 119 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 NHLH2Q02577 135 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 PSG3Q16557 428 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 FAM222AQ5U5X8 452 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 TMUB2Q71RG4 321 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 S100A7AQ86SG5 101 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 C9orf62Q8N4C0 152 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 RNF182Q8N6D2 247 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 POM121L12Q8N7R1 296 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 OR8A1Q8NGG7 326 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 OR5C1Q8NGR4 320 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 MGST2Q99735 147 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 ATP5SQ99766 215 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 ARV1Q9H2C2 271 aa6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 YTHDF2Q9Y5A9 579 aaKnown RBP6.9□□□□□ -1.3
TMEM39A-210ENST00000490099 IGHV3OR16-12A0A075B7B8 117 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 LOC102723971A0A1B0GUV8 181 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 PLAC8L1A1L4L8 177 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 IFNA5P01569 189 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 P0DMU3 169 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 FAM231AP0DMU4 169 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 FAM231CP0DMU5 169 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 NKX2-5P52952 324 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 EMP1P54849 157 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 RRN3P1Q2M238 152 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 LGALSLQ3ZCW2 172 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 MORN5Q5VZ52 161 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 SAT2Q96F10 170 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 NDUFAF3Q9BU61 184 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 ZNF331Q9NQX6 463 aaPredicted RBP6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 UQCC1Q9NVA1 299 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 WDR83OSQ9Y284 106 aa6.89□□□□□ -1.31
TMEM39A-210ENST00000490099 MPDU1O75352 247 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 IGLC2P0DOY2 106 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 RAB31Q13636 194 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 CLINT1Q14677 625 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 OPCMLQ14982 345 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 SPINK13Q1W4C9 94 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 LINC00305Q7Z4B0 112 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 SLC51BQ86UW2 128 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 ZNF471Q9BX82 626 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 PARD6GQ9BYG4 376 aaPredicted RBP6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 DNAJC4Q9NNZ3 241 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 KCNIP2Q9NS61 270 aa6.88□□□□□ -1.31
TMEM39A-210ENST00000490099 LYRM9A8MSI8 78 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 ZNF705GA8MUZ8 300 aaPredicted RBP6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 H3BQ15 152 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 M0R2Z0 102 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 INSP01308 110 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 PRM2P04554 102 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 TPT1P13693 172 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 AZU1P20160 251 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 RPL29P47914 159 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 LGALS9BQ3B8N2 356 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 EIF5AL1Q6IS14 154 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 LCN15Q6UWW0 184 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 Q6ZR54 194 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 BPIFA4PQ86YQ2 179 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 TMEM256Q8N2U0 113 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 ZNF738Q8NE65 137 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 SCGB1C1Q8TD33 95 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 RPUSD4Q96CM3 377 aaKnown RBP6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 SLC50A1Q9BRV3 221 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 SMIM3Q9BZL3 60 aa6.87□□□□□ -1.31
TMEM39A-210ENST00000490099 UBE2L5PA0A1B0GUS4 154 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 C17orf112F2Z3M2 114 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 CAMLGP49069 296 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 TAS2R60P59551 318 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 GUK1Q16774 197 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 RNF212Q495C1 297 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 C10orf113Q5VZT2 155 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 LINC00336Q6ZUF6 198 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 BAP18Q8IXM2 172 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 STOML3Q8TAV4 291 aa6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 GNPNAT1Q96EK6 184 aaPredicted RBP6.86□□□□□ -1.31
TMEM39A-210ENST00000490099 TRAV12-2A0A075B6T6 113 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 PRAC2D3DTV9 90 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 COX7A2P2O60397 106 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 ZNF253O75346 499 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 FGF7P21781 194 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 HIST1H1AQ02539 215 aaPredicted RBP6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 MIC13Q5XKP0 118 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 RPL7L1Q6DKI1 246 aaKnown RBP6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 ZNF493Q6ZR52 646 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms