RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 IGLL5B9A064 214 aa17.22■□□□□ 0.35
PTPN18-213ENST00000489215 EMP1P54849 157 aa17.22■□□□□ 0.35
PTPN18-213ENST00000489215 C20orf144Q9BQM9 153 aa17.22■□□□□ 0.35
PTPN18-213ENST00000489215 PARD6GQ9BYG4 376 aaPredicted RBP17.22■□□□□ 0.35
PTPN18-213ENST00000489215 AAMDCQ9H7C9 122 aa17.22■□□□□ 0.35
PTPN18-213ENST00000489215 CELA1Q9UNI1 258 aa17.22■□□□□ 0.35
PTPN18-213ENST00000489215 LYSTQ99698 3801 aa17.22■□□□□ 0.35
PTPN18-213ENST00000489215 DEFB131BA0A096LNP1 70 aa17.21■□□□□ 0.35
PTPN18-213ENST00000489215 H3BTX0 84 aa17.21■□□□□ 0.35
PTPN18-213ENST00000489215 DKK2Q9UBU2 259 aa17.21■□□□□ 0.35
PTPN18-213ENST00000489215 OXA1LQ15070 435 aa17.2■□□□□ 0.34
PTPN18-213ENST00000489215 NIPSNAP3BQ9BS92 247 aa17.2■□□□□ 0.34
PTPN18-213ENST00000489215 OR51M1Q9H341 326 aa17.2■□□□□ 0.34
PTPN18-213ENST00000489215 GCSAMLQ5JQS6 135 aa17.19■□□□□ 0.34
PTPN18-213ENST00000489215 BAP18Q8IXM2 172 aa17.19■□□□□ 0.34
PTPN18-213ENST00000489215 ODF3Q96PU9 254 aa17.19■□□□□ 0.34
PTPN18-213ENST00000489215 LINC01587Q99440 93 aa17.19■□□□□ 0.34
PTPN18-213ENST00000489215 FUT9Q9Y231 359 aa17.19■□□□□ 0.34
PTPN18-213ENST00000489215 YTHDF2Q9Y5A9 579 aaKnown RBP17.19■□□□□ 0.34
PTPN18-213ENST00000489215 TRAV12-2A0A075B6T6 113 aa17.18■□□□□ 0.34
PTPN18-213ENST00000489215 FAM222AQ5U5X8 452 aa17.18■□□□□ 0.34
PTPN18-213ENST00000489215 RPP25LQ8N5L8 163 aaKnown RBP17.18■□□□□ 0.34
PTPN18-213ENST00000489215 SLC25A2Q9BXI2 301 aa17.18■□□□□ 0.34
PTPN18-213ENST00000489215 NBEAP1P0C6P0 100 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 PYYP10082 97 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 TAS2R45P59539 299 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 TAS2R60P59551 318 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 FFAR4Q5NUL3 377 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 MIR17HGQ75NE6 70 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 FAM210BQ96KR6 192 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 PAXXQ9BUH6 204 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 SMIM3Q9BZL3 60 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 APLNQ9ULZ1 77 aa17.17■□□□□ 0.34
PTPN18-213ENST00000489215 LEPP41159 167 aa17.16■□□□□ 0.34
PTPN18-213ENST00000489215 ZNF266Q14584 549 aa17.16■□□□□ 0.34
PTPN18-213ENST00000489215 FCN2Q15485 313 aa17.16■□□□□ 0.34
PTPN18-213ENST00000489215 RGS21Q2M5E4 152 aa17.16■□□□□ 0.34
PTPN18-213ENST00000489215 BLNKQ8WV28 456 aa17.16■□□□□ 0.34
PTPN18-213ENST00000489215 FAM167A-AS1Q96KT0 104 aa17.16■□□□□ 0.34
PTPN18-213ENST00000489215 LINC00477Q96M19 166 aa17.16■□□□□ 0.34
PTPN18-213ENST00000489215 IGHV4-4A0A075B6R2 117 aa17.15■□□□□ 0.34
PTPN18-213ENST00000489215 LYRM9A8MSI8 78 aa17.15■□□□□ 0.34
PTPN18-213ENST00000489215 PRAC2D3DTV9 90 aa17.15■□□□□ 0.34
PTPN18-213ENST00000489215 NPIPB6E9PJ23 425 aa17.15■□□□□ 0.34
PTPN18-213ENST00000489215 H7BYZ3 331 aa17.15■□□□□ 0.34
PTPN18-213ENST00000489215 NDUFB4O95168 129 aa17.15■□□□□ 0.34
PTPN18-213ENST00000489215 ZNF493Q6ZR52 646 aa17.15■□□□□ 0.34
PTPN18-213ENST00000489215 ZNF767PQ75MW2 155 aa17.15■□□□□ 0.34
PTPN18-213ENST00000489215 ZNF705GA8MUZ8 300 aaPredicted RBP17.14■□□□□ 0.33
PTPN18-213ENST00000489215 GIPP09681 153 aaPredicted RBP17.14■□□□□ 0.33
PTPN18-213ENST00000489215 LYPD1Q8N2G4 141 aa17.14■□□□□ 0.33
PTPN18-213ENST00000489215 RNF141Q8WVD5 230 aa17.14■□□□□ 0.33
PTPN18-213ENST00000489215 SACSQ9NZJ4 4579 aa17.14■□□□□ 0.33
PTPN18-213ENST00000489215 OR7C2O60412 319 aa17.13■□□□□ 0.33
PTPN18-213ENST00000489215 DAD1P61803 113 aa17.13■□□□□ 0.33
PTPN18-213ENST00000489215 ACOT6Q3I5F7 207 aaPredicted RBP17.13■□□□□ 0.33
PTPN18-213ENST00000489215 KHDC3LQ587J8 217 aa17.13■□□□□ 0.33
PTPN18-213ENST00000489215 C16orf74Q96GX8 76 aa17.13■□□□□ 0.33
PTPN18-213ENST00000489215 NDUFAF3Q9BU61 184 aa17.13■□□□□ 0.33
PTPN18-213ENST00000489215 CCDC28AQ8IWP9 274 aa17.12■□□□□ 0.33
PTPN18-213ENST00000489215 AQP10Q96PS8 301 aa17.12■□□□□ 0.33
PTPN18-213ENST00000489215 RYR2Q92736 4967 aa17.11■□□□□ 0.33
PTPN18-213ENST00000489215 A0A1W2PPV4 95 aa17.11■□□□□ 0.33
PTPN18-213ENST00000489215 M0R3E3 92 aa17.11■□□□□ 0.33
PTPN18-213ENST00000489215 M6PRP20645 277 aa17.11■□□□□ 0.33
PTPN18-213ENST00000489215 ICAM4Q14773 271 aa17.11■□□□□ 0.33
PTPN18-213ENST00000489215 EXOC3-AS1Q8N2X6 119 aa17.11■□□□□ 0.33
PTPN18-213ENST00000489215 FXYD5Q96DB9 178 aa17.11■□□□□ 0.33
PTPN18-213ENST00000489215 SLC25A5P05141 298 aaKnown RBP17.1■□□□□ 0.33
PTPN18-213ENST00000489215 OR10J4P0C629 311 aa17.1■□□□□ 0.33
PTPN18-213ENST00000489215 CT45A10P0DMU9 189 aa17.1■□□□□ 0.33
PTPN18-213ENST00000489215 HTN1P15515 57 aa17.1■□□□□ 0.33
PTPN18-213ENST00000489215 CSN1S1P47710 185 aa17.1■□□□□ 0.33
PTPN18-213ENST00000489215 C9orf47Q6ZRZ4 202 aa17.1■□□□□ 0.33
PTPN18-213ENST00000489215 INO80EQ8NBZ0 244 aaPredicted RBP17.1■□□□□ 0.33
PTPN18-213ENST00000489215 TMEM263Q8WUH6 116 aaKnown RBP17.1■□□□□ 0.33
PTPN18-213ENST00000489215 WFDC1Q9HC57 220 aa17.1■□□□□ 0.33
PTPN18-213ENST00000489215 NMBP08949 121 aa17.09■□□□□ 0.33
PTPN18-213ENST00000489215 PRB4P10163 310 aaPredicted RBP17.09■□□□□ 0.33
PTPN18-213ENST00000489215 TMEM78Q5T7P6 136 aa17.09■□□□□ 0.33
PTPN18-213ENST00000489215 GFI1BQ5VTD9 330 aa17.09■□□□□ 0.33
PTPN18-213ENST00000489215 TIMM8BQ9Y5J9 83 aaPredicted RBP17.09■□□□□ 0.33
PTPN18-213ENST00000489215 UBE2L3P68036 154 aaKnown RBP17.08■□□□□ 0.32
PTPN18-213ENST00000489215 PQLC2Q6ZP29 291 aa17.08■□□□□ 0.32
PTPN18-213ENST00000489215 PYGO2Q9BRQ0 406 aa17.08■□□□□ 0.32
PTPN18-213ENST00000489215 AZU1P20160 251 aa17.07■□□□□ 0.32
PTPN18-213ENST00000489215 PLECQ15149 4684 aaKnown RBP17.07■□□□□ 0.32
PTPN18-213ENST00000489215 FAM122CQ6P4D5 195 aa17.07■□□□□ 0.32
PTPN18-213ENST00000489215 AGPAT4-IT1Q9H0P7 198 aa17.07■□□□□ 0.32
PTPN18-213ENST00000489215 MBP02144 154 aa17.06■□□□□ 0.32
PTPN18-213ENST00000489215 P0DMU3 169 aa17.06■□□□□ 0.32
PTPN18-213ENST00000489215 FAM231AP0DMU4 169 aa17.06■□□□□ 0.32
PTPN18-213ENST00000489215 FAM231CP0DMU5 169 aa17.06■□□□□ 0.32
PTPN18-213ENST00000489215 RANP62826 216 aaKnown RBP17.06■□□□□ 0.32
PTPN18-213ENST00000489215 SERF2P84101 59 aa17.06■□□□□ 0.32
PTPN18-213ENST00000489215 FAM74A1Q5RGS3 127 aa17.06■□□□□ 0.32
PTPN18-213ENST00000489215 RXFP4Q8TDU9 374 aa17.06■□□□□ 0.32
PTPN18-213ENST00000489215 PSMG3Q9BT73 122 aaPredicted RBP17.06■□□□□ 0.32
PTPN18-213ENST00000489215 DNAH1Q9P2D7 4330 aa17.06■□□□□ 0.32
PTPN18-213ENST00000489215 TRBV7-9A0A0J9YWB2 115 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms