RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 TMEM189A5PLL7 270 aa11.3□□□□□ -0.6
GABPA-203ENST00000487266 CYCSP99999 105 aaKnown RBP11.3□□□□□ -0.6
GABPA-203ENST00000487266 CHAC2Q8WUX2 184 aa11.3□□□□□ -0.6
GABPA-203ENST00000487266 MBD2Q9UBB5 411 aa11.3□□□□□ -0.6
GABPA-203ENST00000487266 MPDU1O75352 247 aa11.29□□□□□ -0.6
GABPA-203ENST00000487266 MPC2O95563 127 aa11.29□□□□□ -0.6
GABPA-203ENST00000487266 AMBPP02760 352 aa11.29□□□□□ -0.6
GABPA-203ENST00000487266 SLC25A2Q9BXI2 301 aa11.29□□□□□ -0.6
GABPA-203ENST00000487266 SMIM3Q9BZL3 60 aa11.29□□□□□ -0.6
GABPA-203ENST00000487266 WDR61Q9GZS3 305 aaKnown RBP11.29□□□□□ -0.6
GABPA-203ENST00000487266 PPP1R14DQ9NXH3 145 aa11.29□□□□□ -0.6
GABPA-203ENST00000487266 ALG5Q9Y673 324 aa11.29□□□□□ -0.6
GABPA-203ENST00000487266 M0R3E3 92 aa11.28□□□□□ -0.6
GABPA-203ENST00000487266 HTN3P15516 51 aa11.28□□□□□ -0.6
GABPA-203ENST00000487266 AZU1P20160 251 aa11.28□□□□□ -0.6
GABPA-203ENST00000487266 MIR17HGQ75NE6 70 aa11.28□□□□□ -0.6
GABPA-203ENST00000487266 NIPSNAP3BQ9BS92 247 aa11.28□□□□□ -0.6
GABPA-203ENST00000487266 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 PLAC8L1A1L4L8 177 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 J3KRW8 73 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 NDUFB4O95168 129 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 HTN1P15515 57 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 TCTAP57738 103 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 BLNKQ8WV28 456 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 FAM167A-AS1Q96KT0 104 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 ATP5SQ99766 215 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 HSPB11Q9Y547 144 aa11.27□□□□□ -0.61
GABPA-203ENST00000487266 CDKN1BP46527 198 aa11.26□□□□□ -0.61
GABPA-203ENST00000487266 FCN2Q15485 313 aa11.26□□□□□ -0.61
GABPA-203ENST00000487266 GUK1Q16774 197 aa11.26□□□□□ -0.61
GABPA-203ENST00000487266 GFI1BQ5VTD9 330 aa11.26□□□□□ -0.61
GABPA-203ENST00000487266 EXOC3-AS1Q8N2X6 119 aa11.26□□□□□ -0.61
GABPA-203ENST00000487266 OR10J6PQ8NGY7 276 aa11.26□□□□□ -0.61
GABPA-203ENST00000487266 LINC01587Q99440 93 aa11.26□□□□□ -0.61
GABPA-203ENST00000487266 TMEM14CQ9P0S9 112 aa11.26□□□□□ -0.61
GABPA-203ENST00000487266 EIF3GO75821 320 aaKnown RBP eCLIP11.25□□□□□ -0.61
GABPA-203ENST00000487266 PET100P0DJ07 73 aa11.25□□□□□ -0.61
GABPA-203ENST00000487266 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
GABPA-203ENST00000487266 HIST1H1EP10412 219 aaKnown RBP11.25□□□□□ -0.61
GABPA-203ENST00000487266 WFDC1Q9HC57 220 aa11.25□□□□□ -0.61
GABPA-203ENST00000487266 NPIPB6E9PJ23 425 aa11.24□□□□□ -0.61
GABPA-203ENST00000487266 ZNF253O75346 499 aa11.24□□□□□ -0.61
GABPA-203ENST00000487266 OR10J4P0C629 311 aa11.24□□□□□ -0.61
GABPA-203ENST00000487266 RPL12P30050 165 aaKnown RBP11.24□□□□□ -0.61
GABPA-203ENST00000487266 DAD1P61803 113 aa11.24□□□□□ -0.61
GABPA-203ENST00000487266 ERCC8Q13216 396 aa11.24□□□□□ -0.61
GABPA-203ENST00000487266 NDUFAF3Q9BU61 184 aa11.24□□□□□ -0.61
GABPA-203ENST00000487266 TEX48A0A1B0GUV7 120 aa11.23□□□□□ -0.61
GABPA-203ENST00000487266 PTTG1O95997 202 aa11.23□□□□□ -0.61
GABPA-203ENST00000487266 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
GABPA-203ENST00000487266 TIMM9Q9Y5J7 89 aa11.23□□□□□ -0.61
GABPA-203ENST00000487266 IGKV2-40A0A087WW87 121 aaPredicted RBP11.22□□□□□ -0.61
GABPA-203ENST00000487266 C17orf112F2Z3M2 114 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 IGKV2D-40P01614 121 aaPredicted RBP11.22□□□□□ -0.61
GABPA-203ENST00000487266 DEFB130BP0DP73 79 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 DEFB130AP0DP74 79 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 TSPOP30536 169 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 TAS2R60P59551 318 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 ICAM4Q14773 271 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 OXA1LQ15070 435 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 FFAR4Q5NUL3 377 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 FAM122CQ6P4D5 195 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 FXYD5Q96DB9 178 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 ZNF503Q96F45 646 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 PHYHIPLQ96FC7 376 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 MRPL32Q9BYC8 188 aaKnown RBP11.22□□□□□ -0.61
GABPA-203ENST00000487266 KCNIP2Q9NS61 270 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 FUT9Q9Y231 359 aa11.22□□□□□ -0.61
GABPA-203ENST00000487266 DNAH2Q9P225 4427 aa11.21□□□□□ -0.61
GABPA-203ENST00000487266 PDE6HQ13956 83 aa11.21□□□□□ -0.61
GABPA-203ENST00000487266 TMEM88Q6PEY1 159 aa11.21□□□□□ -0.61
GABPA-203ENST00000487266 RNASE8Q8TDE3 154 aaKnown RBP11.21□□□□□ -0.61
GABPA-203ENST00000487266 MRPL53Q96EL3 112 aaKnown RBP11.21□□□□□ -0.61
GABPA-203ENST00000487266 C16orf74Q96GX8 76 aa11.21□□□□□ -0.61
GABPA-203ENST00000487266 PAXXQ9BUH6 204 aa11.21□□□□□ -0.61
GABPA-203ENST00000487266 OR51M1Q9H341 326 aa11.21□□□□□ -0.61
GABPA-203ENST00000487266 TRAV12-3A0A0B4J271 114 aa11.2□□□□□ -0.62
GABPA-203ENST00000487266 LYRM9A8MSI8 78 aa11.2□□□□□ -0.62
GABPA-203ENST00000487266 H7BYZ3 331 aa11.2□□□□□ -0.62
GABPA-203ENST00000487266 OR7C2O60412 319 aa11.2□□□□□ -0.62
GABPA-203ENST00000487266 LEPP41159 167 aa11.2□□□□□ -0.62
GABPA-203ENST00000487266 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
GABPA-203ENST00000487266 AGPAT4-IT1Q9H0P7 198 aa11.2□□□□□ -0.62
GABPA-203ENST00000487266 IFNA5P01569 189 aa11.19□□□□□ -0.62
GABPA-203ENST00000487266 NBEAP1P0C6P0 100 aa11.19□□□□□ -0.62
GABPA-203ENST00000487266 BTN1A1Q13410 526 aa11.19□□□□□ -0.62
GABPA-203ENST00000487266 Q5BKY6 102 aa11.19□□□□□ -0.62
GABPA-203ENST00000487266 SCGB1C1Q8TD33 95 aa11.19□□□□□ -0.62
GABPA-203ENST00000487266 TMEM263Q8WUH6 116 aaKnown RBP11.19□□□□□ -0.62
GABPA-203ENST00000487266 RNF141Q8WVD5 230 aa11.19□□□□□ -0.62
GABPA-203ENST00000487266 VGLL1Q99990 258 aa11.19□□□□□ -0.62
GABPA-203ENST00000487266 MED28Q9H204 178 aa11.19□□□□□ -0.62
GABPA-203ENST00000487266 AAMDCQ9H7C9 122 aa11.19□□□□□ -0.62
GABPA-203ENST00000487266 NOP10Q9NPE3 64 aaKnown RBP11.19□□□□□ -0.62
GABPA-203ENST00000487266 NACAE9PAV3 2078 aa11.18□□□□□ -0.62
GABPA-203ENST00000487266 UBE2L3P68036 154 aaKnown RBP11.18□□□□□ -0.62
GABPA-203ENST00000487266 CD300CQ08708 224 aa11.18□□□□□ -0.62
GABPA-203ENST00000487266 PRR9Q5T870 116 aa11.18□□□□□ -0.62
GABPA-203ENST00000487266 FAM19A4Q96LR4 140 aa11.18□□□□□ -0.62
GABPA-203ENST00000487266 C20orf144Q9BQM9 153 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms