RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PTTG1O95997 202 aa8.78□□□□□ -1
MSH5-216ENST00000484309 AMBPP02760 352 aa8.78□□□□□ -1
MSH5-216ENST00000484309 SPART-AS1P0CW21 52 aa8.78□□□□□ -1
MSH5-216ENST00000484309 PET100P0DJ07 73 aa8.78□□□□□ -1
MSH5-216ENST00000484309 RPL12P30050 165 aaKnown RBP8.78□□□□□ -1
MSH5-216ENST00000484309 KIR3DS1Q14943 382 aa8.78□□□□□ -1
MSH5-216ENST00000484309 MIR17HGQ75NE6 70 aa8.78□□□□□ -1
MSH5-216ENST00000484309 BLNKQ8WV28 456 aa8.78□□□□□ -1
MSH5-216ENST00000484309 SLC25A2Q9BXI2 301 aa8.78□□□□□ -1
MSH5-216ENST00000484309 DKK2Q9UBU2 259 aa8.78□□□□□ -1
MSH5-216ENST00000484309 APLNQ9ULZ1 77 aa8.78□□□□□ -1
MSH5-216ENST00000484309 J3KRW8 73 aa8.77□□□□□ -1.01
MSH5-216ENST00000484309 M0R3E3 92 aa8.77□□□□□ -1.01
MSH5-216ENST00000484309 FCN2Q15485 313 aa8.77□□□□□ -1.01
MSH5-216ENST00000484309 RPP25LQ8N5L8 163 aaKnown RBP8.77□□□□□ -1.01
MSH5-216ENST00000484309 OR10J6PQ8NGY7 276 aa8.77□□□□□ -1.01
MSH5-216ENST00000484309 TMEM14CQ9P0S9 112 aa8.77□□□□□ -1.01
MSH5-216ENST00000484309 TRBV19A0A075B6N1 114 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 C17orf112F2Z3M2 114 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 EIF3GO75821 320 aaKnown RBP eCLIP8.76□□□□□ -1.01
MSH5-216ENST00000484309 NDUFB4O95168 129 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 HIST1H1EP10412 219 aaKnown RBP8.76□□□□□ -1.01
MSH5-216ENST00000484309 HTN1P15515 57 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 HTN3P15516 51 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 AZU1P20160 251 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 CDKN1BP46527 198 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 GUK1Q16774 197 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 LGALS9CQ6DKI2 356 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 EXOC3-AS1Q8N2X6 119 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 FAM167A-AS1Q96KT0 104 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 LINC01587Q99440 93 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 NIPSNAP3BQ9BS92 247 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 MED28Q9H204 178 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 WFDC1Q9HC57 220 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 KCNIP2Q9NS61 270 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 TIMM9Q9Y5J7 89 aa8.76□□□□□ -1.01
MSH5-216ENST00000484309 KMT2AQ03164 3969 aa8.75□□□□□ -1.01
MSH5-216ENST00000484309 EPPK1P58107 5090 aaKnown RBP8.75□□□□□ -1.01
MSH5-216ENST00000484309 IFNA5P01569 189 aa8.75□□□□□ -1.01
MSH5-216ENST00000484309 OR10J4P0C629 311 aa8.75□□□□□ -1.01
MSH5-216ENST00000484309 ERCC8Q13216 396 aa8.75□□□□□ -1.01
MSH5-216ENST00000484309 FFAR4Q5NUL3 377 aa8.75□□□□□ -1.01
MSH5-216ENST00000484309 SCGB1C1Q8TD33 95 aa8.75□□□□□ -1.01
MSH5-216ENST00000484309 NPIPB6E9PJ23 425 aa8.74□□□□□ -1.01
MSH5-216ENST00000484309 ZNF253O75346 499 aa8.74□□□□□ -1.01
MSH5-216ENST00000484309 CT45A10P0DMU9 189 aa8.74□□□□□ -1.01
MSH5-216ENST00000484309 TCTAP57738 103 aa8.74□□□□□ -1.01
MSH5-216ENST00000484309 DAD1P61803 113 aa8.74□□□□□ -1.01
MSH5-216ENST00000484309 GFI1BQ5VTD9 330 aa8.74□□□□□ -1.01
MSH5-216ENST00000484309 MRPL32Q9BYC8 188 aaKnown RBP8.74□□□□□ -1.01
MSH5-216ENST00000484309 OR51M1Q9H341 326 aa8.74□□□□□ -1.01
MSH5-216ENST00000484309 FUT9Q9Y231 359 aa8.74□□□□□ -1.01
MSH5-216ENST00000484309 VPS13DQ5THJ4 4388 aa8.74□□□□□ -1.01
MSH5-216ENST00000484309 TEX48A0A1B0GUV7 120 aa8.73□□□□□ -1.01
MSH5-216ENST00000484309 OR7C2O60412 319 aa8.73□□□□□ -1.01
MSH5-216ENST00000484309 ICAM4Q14773 271 aa8.73□□□□□ -1.01
MSH5-216ENST00000484309 FAM122CQ6P4D5 195 aa8.73□□□□□ -1.01
MSH5-216ENST00000484309 TMEM256Q8N2U0 113 aa8.73□□□□□ -1.01
MSH5-216ENST00000484309 FXYD5Q96DB9 178 aa8.73□□□□□ -1.01
MSH5-216ENST00000484309 PHYHIPLQ96FC7 376 aa8.73□□□□□ -1.01
MSH5-216ENST00000484309 PAXXQ9BUH6 204 aa8.73□□□□□ -1.01
MSH5-216ENST00000484309 AAMDCQ9H7C9 122 aa8.73□□□□□ -1.01
MSH5-216ENST00000484309 IGKV2-40A0A087WW87 121 aaPredicted RBP8.72□□□□□ -1.01
MSH5-216ENST00000484309 TRAV12-3A0A0B4J271 114 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 PLAC8L1A1L4L8 177 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 IGKV2D-40P01614 121 aaPredicted RBP8.72□□□□□ -1.01
MSH5-216ENST00000484309 NBEAP1P0C6P0 100 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 DEFB130BP0DP73 79 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 DEFB130AP0DP74 79 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 TSPOP30536 169 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 LEPP41159 167 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 TAS2R60P59551 318 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 PDE6HQ13956 83 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 Q5BKY6 102 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 MRPL53Q96EL3 112 aaKnown RBP8.72□□□□□ -1.01
MSH5-216ENST00000484309 ZNF503Q96F45 646 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 NDUFAF3Q9BU61 184 aa8.72□□□□□ -1.01
MSH5-216ENST00000484309 NACAE9PAV3 2078 aa8.71□□□□□ -1.01
MSH5-216ENST00000484309 DNAH6Q9C0G6 4158 aa8.71□□□□□ -1.01
MSH5-216ENST00000484309 RAB2AP61019 212 aa8.71□□□□□ -1.02
MSH5-216ENST00000484309 UBE2L3P68036 154 aaKnown RBP8.71□□□□□ -1.02
MSH5-216ENST00000484309 AGPAT4-IT1Q9H0P7 198 aa8.71□□□□□ -1.02
MSH5-216ENST00000484309 PRELID1Q9Y255 219 aa8.71□□□□□ -1.02
MSH5-216ENST00000484309 LYRM9A8MSI8 78 aa8.7□□□□□ -1.02
MSH5-216ENST00000484309 H7BYZ3 331 aa8.7□□□□□ -1.02
MSH5-216ENST00000484309 OXA1LQ15070 435 aa8.7□□□□□ -1.02
MSH5-216ENST00000484309 HSD17B11Q8NBQ5 300 aa8.7□□□□□ -1.02
MSH5-216ENST00000484309 C16orf74Q96GX8 76 aa8.7□□□□□ -1.02
MSH5-216ENST00000484309 ODF3Q96PU9 254 aa8.7□□□□□ -1.02
MSH5-216ENST00000484309 VGLL1Q99990 258 aa8.7□□□□□ -1.02
MSH5-216ENST00000484309 HMGB3O15347 200 aaKnown RBP8.69□□□□□ -1.02
MSH5-216ENST00000484309 GIPP09681 153 aaPredicted RBP8.69□□□□□ -1.02
MSH5-216ENST00000484309 RANP62826 216 aaKnown RBP8.69□□□□□ -1.02
MSH5-216ENST00000484309 CD300CQ08708 224 aa8.69□□□□□ -1.02
MSH5-216ENST00000484309 BTN1A1Q13410 526 aa8.69□□□□□ -1.02
MSH5-216ENST00000484309 RGS21Q2M5E4 152 aa8.69□□□□□ -1.02
MSH5-216ENST00000484309 KHDC3LQ587J8 217 aa8.69□□□□□ -1.02
MSH5-216ENST00000484309 TMEM88Q6PEY1 159 aa8.69□□□□□ -1.02
MSH5-216ENST00000484309 Q8TAT8 98 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms