RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ARID1AO14497 2285 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 IGKV1-12A0A0C4DH73 117 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 LOC107984640A0A0U1RRK4 108 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 A0A1B0GW64 132 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 ZFP92A6NM28 416 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 TMEM212A6NML5 194 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 I3L521 148 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 UBFD1O14562 309 aaKnown RBP2.01□□□□□ -2.09
HMGN4-202ENST00000477243 IGKV1-5P01602 117 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 IGKV1D-12P01611 117 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 IGLV3-25P01717 112 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 PRM2P04554 102 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 FGF7P21781 194 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 NPPCP23582 126 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 FKBP2P26885 142 aaKnown RBP2.01□□□□□ -2.09
HMGN4-202ENST00000477243 SRP14P37108 136 aaKnown RBP2.01□□□□□ -2.09
HMGN4-202ENST00000477243 GNG4P50150 75 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 CRISP3P54108 245 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 UBE2BP63146 152 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 EIF5AP63241 154 aaKnown RBP2.01□□□□□ -2.09
HMGN4-202ENST00000477243 AKR1C1Q04828 323 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 BSPH1Q075Z2 132 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 PSG7Q13046 419 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 AADACL3Q5VUY0 350 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 AMMECR1LQ6DCA0 310 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 AMTNQ6UX39 209 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 ZNF329Q86UD4 541 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 NR2C2APQ86WQ0 139 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 DEFB119Q8N690 84 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 POM121L12Q8N7R1 296 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 C15orf56Q8N910 161 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 TERB2Q8NHR7 220 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 MAL2Q969L2 176 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 HIST1H2BAQ96A08 127 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 B9D2Q9BPU9 175 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 SPANXDQ9BXN6 97 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 RERGLQ9H628 205 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 SDF2L1Q9HCN8 221 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 NIT2Q9NQR4 276 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 SLC39A9Q9NUM3 307 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 C21orf62Q9NYP8 219 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 ZNRD1Q9P1U0 126 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 SNX12Q9UMY4 172 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 ZFP30Q9Y2G7 519 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 PHLDA3Q9Y5J5 127 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 SOX21Q9Y651 276 aaPredicted RBP2.01□□□□□ -2.09
HMGN4-202ENST00000477243 PCM1Q15154 2024 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 TDRD6O60522 2096 aaKnown RBP2□□□□□ -2.09
HMGN4-202ENST00000477243 COL4A2P08572 1712 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 CITO14578 2027 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 PCNX3Q9H6A9 2034 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 ANAPC1Q9H1A4 1944 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 IGHV1-3A0A0C4DH29 117 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 IGHV1-58A0A0C4DH39 117 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 GGT3PA6NGU5 568 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 GGTLC3B5MD39 225 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 ZNF324O75467 553 aaPredicted RBP2□□□□□ -2.09
HMGN4-202ENST00000477243 SOD1P00441 154 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 AZU1P20160 251 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 NTF3P20783 257 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 RPL35P42766 123 aaKnown RBP2□□□□□ -2.09
HMGN4-202ENST00000477243 PKIAP61925 76 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 MRPL51Q4U2R6 128 aaKnown RBP2□□□□□ -2.09
HMGN4-202ENST00000477243 ZNF678Q5SXM1 525 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 Q5XG85 94 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 ZNF880Q6PDB4 577 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 LINC01551Q86U37 167 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 CEND1Q8N111 149 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 RNF175Q8N4F7 328 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2□□□□□ -2.09
HMGN4-202ENST00000477243 APCDD1LQ8NCL9 501 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 LINC01006Q8NI28 216 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 FNDC9Q8TBE3 224 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 ITLN2Q8WWU7 325 aaPredicted RBP2□□□□□ -2.09
HMGN4-202ENST00000477243 SLC25A46Q96AG3 418 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 ELSPBP1Q96BH3 223 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 ADAT1Q9BUB4 502 aaKnown RBP2□□□□□ -2.09
HMGN4-202ENST00000477243 DERL1Q9BUN8 251 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 TMEM191AQ9H0A3 160 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 CST9LQ9H4G1 147 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 OTORQ9NRC9 128 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 CBLN4Q9NTU7 201 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 CCDC167Q9P0B6 97 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 BAIAP2Q9UQB8 552 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 TRAPPC1Q9Y5R8 145 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 GTF3C1Q12789 2109 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 MUC22E2RYF6 1773 aaPredicted RBP2□□□□□ -2.09
HMGN4-202ENST00000477243 DSCAMO60469 2012 aa2□□□□□ -2.09
HMGN4-202ENST00000477243 MYH13Q9UKX3 1938 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 PI4KAP42356 2102 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 DSPPQ9NZW4 1301 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 IGLV3-10A0A075B6K4 115 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 A0A087X0T9 212 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 IGHV3-64DA0A0J9YX35 117 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 TMEM223A0PJW6 202 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 GRIFINA4D1Z8 144 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 ZNF860A6NHJ4 632 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 IFITM5A6NNB3 132 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 BBIP1A8MTZ0 92 aa1.99□□□□□ -2.09
HMGN4-202ENST00000477243 C1orf196B1AJZ1 125 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms