RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 DNAH11Q96DT5 4516 aa9.27□□□□□ -0.92
CPSF4-210ENST00000469897 DYNC1H1Q14204 4646 aaKnown RBP9.27□□□□□ -0.93
CPSF4-210ENST00000469897 TRAV6A0A075B6T7 132 aa9.27□□□□□ -0.93
CPSF4-210ENST00000469897 C5orf51A6NDU8 294 aa9.27□□□□□ -0.93
CPSF4-210ENST00000469897 TCRBP04435 133 aa9.27□□□□□ -0.93
CPSF4-210ENST00000469897 CT45A10P0DMU9 189 aa9.27□□□□□ -0.93
CPSF4-210ENST00000469897 IGLC2P0DOY2 106 aa9.27□□□□□ -0.93
CPSF4-210ENST00000469897 RAB31Q13636 194 aa9.27□□□□□ -0.93
CPSF4-210ENST00000469897 CLINT1Q14677 625 aa9.27□□□□□ -0.93
CPSF4-210ENST00000469897 GFI1BQ5VTD9 330 aa9.27□□□□□ -0.93
CPSF4-210ENST00000469897 TMEM263Q8WUH6 116 aaKnown RBP9.27□□□□□ -0.93
CPSF4-210ENST00000469897 TRAV12-3A0A0B4J271 114 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 GAGE12BA1L429 117 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 GAGE7O76087 117 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 SSX7Q7RTT5 188 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 C6orf223Q8N319 242 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 ZNF431Q8TF32 576 aaPredicted RBP9.26□□□□□ -0.93
CPSF4-210ENST00000469897 C20orf144Q9BQM9 153 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 SEC22CQ9BRL7 303 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 ZNF586Q9NXT0 402 aa9.26□□□□□ -0.93
CPSF4-210ENST00000469897 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 A0A0J9YY99 117 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 LYRM1O43325 122 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 HOXA5P20719 270 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 C12orf45Q8N5I9 185 aaPredicted RBP9.25□□□□□ -0.93
CPSF4-210ENST00000469897 GNPNAT1Q96EK6 184 aaPredicted RBP9.25□□□□□ -0.93
CPSF4-210ENST00000469897 C2orf50Q96LR7 162 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 C11orf1Q9H5F2 150 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 UQCC1Q9NVA1 299 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 WDR83OSQ9Y284 106 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 PXMP4Q9Y6I8 212 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 PKHD1P08F94 4074 aa9.25□□□□□ -0.93
CPSF4-210ENST00000469897 RLN2P04090 185 aa9.24□□□□□ -0.93
CPSF4-210ENST00000469897 GUK1Q16774 197 aa9.24□□□□□ -0.93
CPSF4-210ENST00000469897 LINC00612Q8N6U2 182 aa9.24□□□□□ -0.93
CPSF4-210ENST00000469897 OR1L4Q8NGR5 311 aa9.24□□□□□ -0.93
CPSF4-210ENST00000469897 KRTAP4-5Q9BYR2 181 aa9.24□□□□□ -0.93
CPSF4-210ENST00000469897 Q9H8V8 135 aa9.24□□□□□ -0.93
CPSF4-210ENST00000469897 SLC39A9Q9NUM3 307 aa9.24□□□□□ -0.93
CPSF4-210ENST00000469897 SNURFLB1AK76 121 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 NPIPB6E9PJ23 425 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 PVALBP20472 110 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-210ENST00000469897 M6PRP20645 277 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 S100A11P31949 105 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 LEPP41159 167 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 RPL29P47914 159 aaKnown RBP9.23□□□□□ -0.93
CPSF4-210ENST00000469897 S100A10P60903 97 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 BAXQ07812 192 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 ERCC8Q13216 396 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 ESRGQ1W209 222 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 VWC2Q2TAL6 325 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 NUDT15Q9NV35 164 aa9.23□□□□□ -0.93
CPSF4-210ENST00000469897 IGSF23A1L1A6 192 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 M0R3E3 92 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 H2AFB2P0C5Z0 115 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 SULT1A1P50225 295 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 IL15RAQ13261 267 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 RAB32Q13637 225 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 TMEM252Q8N6L7 170 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 RXFP4Q8TDU9 374 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 PFDN5Q99471 154 aa9.22□□□□□ -0.93
CPSF4-210ENST00000469897 TRBV19A0A075B6N1 114 aa9.21□□□□□ -0.94
CPSF4-210ENST00000469897 UBE2L5PA0A1B0GUS4 154 aa9.21□□□□□ -0.94
CPSF4-210ENST00000469897 NDUFB4O95168 129 aa9.21□□□□□ -0.94
CPSF4-210ENST00000469897 Q6ZTI0 123 aa9.21□□□□□ -0.94
CPSF4-210ENST00000469897 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.94
CPSF4-210ENST00000469897 AGPAT4-IT1Q9H0P7 198 aa9.21□□□□□ -0.94
CPSF4-210ENST00000469897 GSN-AS1Q9NRJ2 163 aa9.21□□□□□ -0.94
CPSF4-210ENST00000469897 LYRM2Q9NU23 88 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-210ENST00000469897 TIMM9Q9Y5J7 89 aa9.21□□□□□ -0.94
CPSF4-210ENST00000469897 ZNF253O75346 499 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 SLC25A5P05141 298 aaKnown RBP9.2□□□□□ -0.94
CPSF4-210ENST00000469897 PYYP10082 97 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 HIST1H1EP10412 219 aaKnown RBP9.2□□□□□ -0.94
CPSF4-210ENST00000469897 FGF7P21781 194 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 RNASE4P34096 147 aaKnown RBP9.2□□□□□ -0.94
CPSF4-210ENST00000469897 CD300CQ08708 224 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 DAZ2Q13117 558 aaKnown RBP9.2□□□□□ -0.94
CPSF4-210ENST00000469897 ATP6V1FQ16864 119 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 GCSAMLQ5JQS6 135 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 EXOC3-AS1Q8N2X6 119 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 CHAC2Q8WUX2 184 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 BLNKQ8WV28 456 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 LINC00477Q96M19 166 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 ODF3Q96PU9 254 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 TMPRSS5Q9H3S3 457 aa9.2□□□□□ -0.94
CPSF4-210ENST00000469897 FAM240BA0A1B0GVZ2 78 aa9.19□□□□□ -0.94
CPSF4-210ENST00000469897 ZNF324O75467 553 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-210ENST00000469897 HBG1P69891 147 aa9.19□□□□□ -0.94
CPSF4-210ENST00000469897 HBG2P69892 147 aa9.19□□□□□ -0.94
CPSF4-210ENST00000469897 NHLH2Q02577 135 aa9.19□□□□□ -0.94
CPSF4-210ENST00000469897 STX12Q86Y82 276 aa9.19□□□□□ -0.94
CPSF4-210ENST00000469897 MRPL53Q96EL3 112 aaKnown RBP9.19□□□□□ -0.94
CPSF4-210ENST00000469897 KRTAP1-5Q9BYS1 174 aa9.19□□□□□ -0.94
CPSF4-210ENST00000469897 GPN1Q9HCN4 374 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms