RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 OR10J6PQ8NGY7 276 aa9.31□□□□□ -0.92
SPTLC1-204ENST00000469778 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
SPTLC1-204ENST00000469778 C20orf173Q96LM9 149 aa9.31□□□□□ -0.92
SPTLC1-204ENST00000469778 TRAV1-1A0A0B4J248 108 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 KNCNA6PVL3 124 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 SLC17A3O00476 420 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 SULT1A2P50226 295 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 PPT1P50897 306 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 RANP62826 216 aaKnown RBP9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 SBSPONQ8IVN8 264 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 RNF182Q8N6D2 247 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 SPATA25Q9BR10 227 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 TM2D3Q9BRN9 247 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 OTORQ9NRC9 128 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 ARL2-SNX15V9GYD0 113 aa9.3□□□□□ -0.92
SPTLC1-204ENST00000469778 SERTM2A0A1B0GWG4 89 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 RBAKDNA6NC62 111 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 MAP1LC3B2A6NCE7 125 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 SLC25A5P05141 298 aaKnown RBP9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 H2AFB1P0C5Y9 115 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 ICAM4Q14773 271 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 ZNF726P1Q15940 193 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 ZNF124Q15973 351 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 IGFL4Q6B9Z1 124 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 CMTM2Q8TAZ6 248 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 FAM213BQ8TBF2 198 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 SFT2D1Q8WV19 159 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 LINC00477Q96M19 166 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 ODF3Q96PU9 254 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 TCEAL7Q9BRU2 100 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 MAP1LC3BQ9GZQ8 125 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 Q9H3A6 140 aa9.29□□□□□ -0.92
SPTLC1-204ENST00000469778 TRBV7-9A0A0J9YWB2 115 aa9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 H3BTX0 84 aa9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 HMGB3O15347 200 aaKnown RBP9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 HBE1P02100 147 aa9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 NMBP08949 121 aa9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 TSPOP30536 169 aa9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 FHITP49789 147 aa9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 CNN1P51911 297 aaKnown RBP9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 OR4B1Q8NGF8 309 aa9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 PPP1R14DQ9NXH3 145 aa9.28□□□□□ -0.92
SPTLC1-204ENST00000469778 PGPA6NDG6 321 aa9.27□□□□□ -0.93
SPTLC1-204ENST00000469778 FBLL1A6NHQ2 334 aaKnown RBP9.27□□□□□ -0.93
SPTLC1-204ENST00000469778 PMS2P11Q13670 270 aa9.27□□□□□ -0.93
SPTLC1-204ENST00000469778 C9orf47Q6ZRZ4 202 aa9.27□□□□□ -0.93
SPTLC1-204ENST00000469778 EXOC3-AS1Q8N2X6 119 aa9.27□□□□□ -0.93
SPTLC1-204ENST00000469778 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.93
SPTLC1-204ENST00000469778 NPIPB6E9PJ23 425 aa9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 K7EQM0 130 aa9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 SPRY2O43597 315 aa9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 CA1P00915 261 aaPredicted RBP9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 HLA-DMBP28068 263 aa9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 NKX2-5P52952 324 aaPredicted RBP9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 BLOC1S1P78537 153 aa9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 HIST1H1AQ02539 215 aaPredicted RBP9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 C5orf17Q8NAS9 161 aa9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 RNF183Q96D59 192 aa9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 RCHY1Q96PM5 261 aa9.26□□□□□ -0.93
SPTLC1-204ENST00000469778 ZNF705FA8MVS1 300 aaPredicted RBP9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 DIRC3C9JPN6 131 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 F6UB75 175 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 F6UZH7 168 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 M0R3E3 92 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 TAGLN2P37802 199 aaKnown RBP9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 TMEM78Q5T7P6 136 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 AMTNQ6UX39 209 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 SSX7Q7RTT5 188 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 IQCF2Q8IXL9 164 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 ASCL2Q99929 193 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 C20orf144Q9BQM9 153 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 TXNDC17Q9BRA2 123 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 LENEPQ9Y5L5 61 aa9.25□□□□□ -0.93
SPTLC1-204ENST00000469778 BOLA2-SMG1P6H3BVE0 249 aa9.24□□□□□ -0.93
SPTLC1-204ENST00000469778 FGF8P55075 233 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1-204ENST00000469778 SUMO1P63165 101 aaKnown RBP9.24□□□□□ -0.93
SPTLC1-204ENST00000469778 HIST1H2BAQ96A08 127 aa9.24□□□□□ -0.93
SPTLC1-204ENST00000469778 IGF2BP2-AS1Q96M15 143 aa9.24□□□□□ -0.93
SPTLC1-204ENST00000469778 U3KQK5 164 aa9.24□□□□□ -0.93
SPTLC1-204ENST00000469778 SMIM9A6NGZ8 99 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 FAM74A7A6NL05 159 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 ZNF705EA8MWA4 302 aaPredicted RBP9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 PRAC2D3DTV9 90 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 EIF3GO75821 320 aaKnown RBP eCLIP9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 GIG44P09565 113 aaPredicted RBP9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 LEPP41159 167 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 CDKN1BP46527 198 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 ZNF138P52744 262 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 TMEM256Q8N2U0 113 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 CSNK1G2-AS1Q8NCQ2 148 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 OVOL2Q9BRP0 275 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 AGPAT4-IT1Q9H0P7 198 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 MANBALQ9NQG1 85 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 EPDR1Q9UM22 224 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
SPTLC1-204ENST00000469778 INSP01308 110 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms