RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 OR2H1Q9GZK4 316 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 C11orf68Q9H3H3 251 aaKnown RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 BCL2L10Q9HD36 194 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 RPUSD1Q9UJJ7 312 aaKnown RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 TRAPPC2LQ9UL33 140 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 TPRKBQ9Y3C4 175 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 MED31Q9Y3C7 131 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 AHCTF1Q8WYP5 2266 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 ICE1Q9Y2F5 2266 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 DSPPQ9NZW4 1301 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZFHX4Q86UP3 3567 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 EP300Q09472 2414 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 MEIS3P1A6NDR6 274 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 I3L521 148 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGKV3-11P04433 115 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 PTHLHP12272 177 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 EVI2AP22794 236 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 RRAS2P62070 204 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 RPL30P62888 115 aaKnown RBP2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF141Q15928 474 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 RTL8BQ17RB0 113 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 DEFB109BQ30KR1 87 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 RPL22L1Q6P5R6 122 aaKnown RBP2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 PRSS54Q6PEW0 395 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 AMTNQ6UX39 209 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR11G2Q8NGC1 345 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR10AC1Q8NH08 325 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR4K15Q8NH41 348 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR4A5Q8NH83 315 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 CMBLQ96DG6 245 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 PCNX1Q96RV3 2341 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 RNF5Q99942 180 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 RTL8AQ9BWD3 113 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF471Q9BX82 626 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 SMIM3Q9BZL3 60 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 TMEM38BQ9NVV0 291 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 KLK12Q9UKR0 248 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 CYSLTR1Q9Y271 337 aa2.38□□□□□ -2.03
HMGB1P25-201ENST00000468402 AGRNO00468 2067 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZFHX2Q9C0A1 2572 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 POLEQ07864 2286 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGHV3OR15-7A0A075B7D8 119 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 A0A087WX48 190 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 TRAV4A0A0B4J268 109 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR5H14A6NHG9 310 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 C9JAW5 83 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 K7EM74 188 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 KLF7O75840 302 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 LYZL6O75951 148 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 DPM2O94777 84 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 NDUFB2O95178 105 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 CSN2P05814 226 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF25P17030 456 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 RPL7P18124 248 aaKnown RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 NFYBP25208 207 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 S100A11P31949 105 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 SDC2P34741 201 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 OPRM1P35372 400 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 SRP14P37108 136 aaKnown RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 CD200P41217 278 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 CSN1S1P47710 185 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 GABRA2P47869 451 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 POLR2HP52434 150 aaKnown RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 KLF3P57682 345 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 SMIM11AP58511 58 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 LINC00313P59037 77 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 TAS2R30P59541 319 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 KRTAP10-5P60370 271 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 EIF5AP63241 154 aaKnown RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 PLGLB1Q02325 96 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 RNASE10Q5GAN6 216 aaKnown RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 BCL2L15Q5TBC7 163 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 C1orf140Q5VVS0 124 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 RASL11AQ6T310 242 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 TRAPPC6BQ86SZ2 158 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 RPS19BP1Q86WX3 136 aaKnown RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF695Q8IW36 515 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF101Q8IZC7 436 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 EXOC3-AS1Q8N2X6 119 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 PLPP5Q8NEB5 264 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR10D4PQ8NGN7 298 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR5H6Q8NGV6 325 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 ARL11Q969Q4 196 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGF2BP2-AS1Q96M15 143 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 MGLLQ99685 303 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 DUSP21Q9H596 190 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 PROK2Q9HC23 129 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 TXNL4BQ9NX01 149 aaKnown RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 ANAPC11Q9NYG5 84 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF492Q9P255 531 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 COMMD3Q9UBI1 195 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 NAT8Q9UHE5 227 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF230Q9UIE0 474 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 HIGD1AQ9Y241 93 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 LSM2Q9Y333 95 aaKnown RBP2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 SHANK1Q9Y566 2161 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 DSCAMO60469 2012 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 ASPMQ8IZT6 3477 aa2.37□□□□□ -2.03
HMGB1P25-201ENST00000468402 MGAQ8IWI9 3026 aa2.36□□□□□ -2.03
HMGB1P25-201ENST00000468402 LOC400499M0QZD8 3231 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms