RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 KCNIP2Q9NS61 270 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 DKK2Q9UBU2 259 aa13.66□□□□□ -0.22
COL7A1-207ENST00000467985 LOC102723971A0A1B0GUV8 181 aa13.65□□□□□ -0.22
COL7A1-207ENST00000467985 B2MP61769 119 aa13.65□□□□□ -0.22
COL7A1-207ENST00000467985 PSG3Q16557 428 aa13.65□□□□□ -0.22
COL7A1-207ENST00000467985 LCN15Q6UWW0 184 aa13.65□□□□□ -0.22
COL7A1-207ENST00000467985 TMUB2Q71RG4 321 aa13.65□□□□□ -0.22
COL7A1-207ENST00000467985 BPIFA4PQ86YQ2 179 aa13.65□□□□□ -0.22
COL7A1-207ENST00000467985 NDUFAF3Q9BU61 184 aa13.65□□□□□ -0.22
COL7A1-207ENST00000467985 NPCDR1Q9BY65 106 aa13.65□□□□□ -0.22
COL7A1-207ENST00000467985 BCL2L11O43521 198 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 PRR20EP86478 221 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 PRR20CP86479 221 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 PRR20DP86480 221 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 PRR20BP86481 221 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 PRR20AP86496 221 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 FAM222AQ5U5X8 452 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 C10orf113Q5VZT2 155 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 Q6ZRG5 221 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 HSD17B11Q8NBQ5 300 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 OR8A1Q8NGG7 326 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 FAM210BQ96KR6 192 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 NIPSNAP3BQ9BS92 247 aa13.64□□□□□ -0.23
COL7A1-207ENST00000467985 MRPS12O15235 138 aaKnown RBP13.63□□□□□ -0.23
COL7A1-207ENST00000467985 HIST1H1AQ02539 215 aaPredicted RBP13.63□□□□□ -0.23
COL7A1-207ENST00000467985 SPINK13Q1W4C9 94 aa13.63□□□□□ -0.23
COL7A1-207ENST00000467985 RPL7L1Q6DKI1 246 aaKnown RBP13.63□□□□□ -0.23
COL7A1-207ENST00000467985 SLC50A1Q9BRV3 221 aa13.63□□□□□ -0.23
COL7A1-207ENST00000467985 ZNF471Q9BX82 626 aaPredicted RBP13.63□□□□□ -0.23
COL7A1-207ENST00000467985 PARD6GQ9BYG4 376 aaPredicted RBP13.63□□□□□ -0.23
COL7A1-207ENST00000467985 DNAJC4Q9NNZ3 241 aa13.63□□□□□ -0.23
COL7A1-207ENST00000467985 PPP1R14DQ9NXH3 145 aa13.63□□□□□ -0.23
COL7A1-207ENST00000467985 DNAH6Q9C0G6 4158 aa13.63□□□□□ -0.23
COL7A1-207ENST00000467985 BOLA2-SMG1P6H3BVE0 249 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 M0R2Z0 102 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 P0DMU3 169 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 FAM231AP0DMU4 169 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 FAM231CP0DMU5 169 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 NKX2-5P52952 324 aaPredicted RBP13.62□□□□□ -0.23
COL7A1-207ENST00000467985 EIF5AP63241 154 aaKnown RBP13.62□□□□□ -0.23
COL7A1-207ENST00000467985 OPCMLQ14982 345 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 LGALSLQ3ZCW2 172 aaPredicted RBP13.62□□□□□ -0.23
COL7A1-207ENST00000467985 MIC13Q5XKP0 118 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 OR1L4Q8NGR5 311 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 TMEM37Q8WXS4 190 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 PFDN5Q99471 154 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 ZNF331Q9NQX6 463 aaPredicted RBP13.62□□□□□ -0.23
COL7A1-207ENST00000467985 YTHDF2Q9Y5A9 579 aaKnown RBP13.62□□□□□ -0.23
COL7A1-207ENST00000467985 PXMP4Q9Y6I8 212 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 DNAH10Q8IVF4 4471 aa13.62□□□□□ -0.23
COL7A1-207ENST00000467985 CRXO43186 299 aaPredicted RBP13.61□□□□□ -0.23
COL7A1-207ENST00000467985 RPL29P47914 159 aaKnown RBP13.61□□□□□ -0.23
COL7A1-207ENST00000467985 RHOBP62745 196 aa13.61□□□□□ -0.23
COL7A1-207ENST00000467985 RPUSD4Q96CM3 377 aaKnown RBP13.61□□□□□ -0.23
COL7A1-207ENST00000467985 TSPOP30536 169 aa13.6□□□□□ -0.23
COL7A1-207ENST00000467985 TMEM256Q8N2U0 113 aa13.6□□□□□ -0.23
COL7A1-207ENST00000467985 C9orf62Q8N4C0 152 aa13.6□□□□□ -0.23
COL7A1-207ENST00000467985 GNPNAT1Q96EK6 184 aaPredicted RBP13.6□□□□□ -0.23
COL7A1-207ENST00000467985 SLC39A9Q9NUM3 307 aa13.6□□□□□ -0.23
COL7A1-207ENST00000467985 HECTD4Q9Y4D8 3996 aa13.6□□□□□ -0.23
COL7A1-207ENST00000467985 GUK1Q16774 197 aa13.59□□□□□ -0.23
COL7A1-207ENST00000467985 FFAR4Q5NUL3 377 aa13.59□□□□□ -0.23
COL7A1-207ENST00000467985 BAP18Q8IXM2 172 aa13.59□□□□□ -0.23
COL7A1-207ENST00000467985 LYRM9A8MSI8 78 aa13.58□□□□□ -0.24
COL7A1-207ENST00000467985 IGLC2P0DOY2 106 aa13.58□□□□□ -0.24
COL7A1-207ENST00000467985 TPT1P13693 172 aaKnown RBP13.58□□□□□ -0.24
COL7A1-207ENST00000467985 ATP6V0CP27449 155 aa13.58□□□□□ -0.24
COL7A1-207ENST00000467985 DAD1P61803 113 aa13.58□□□□□ -0.24
COL7A1-207ENST00000467985 TIMM9Q9Y5J7 89 aa13.58□□□□□ -0.24
COL7A1-207ENST00000467985 TRAV12-2A0A075B6T6 113 aa13.57□□□□□ -0.24
COL7A1-207ENST00000467985 ZNF705GA8MUZ8 300 aaPredicted RBP13.57□□□□□ -0.24
COL7A1-207ENST00000467985 CDKN1BP46527 198 aa13.57□□□□□ -0.24
COL7A1-207ENST00000467985 POM121L12Q8N7R1 296 aa13.57□□□□□ -0.24
COL7A1-207ENST00000467985 OR10J6PQ8NGY7 276 aa13.57□□□□□ -0.24
COL7A1-207ENST00000467985 PSMG3Q9BT73 122 aaPredicted RBP13.57□□□□□ -0.24
COL7A1-207ENST00000467985 CYTL1Q9NRR1 136 aa13.57□□□□□ -0.24
COL7A1-207ENST00000467985 ACOT6Q3I5F7 207 aaPredicted RBP13.56□□□□□ -0.24
COL7A1-207ENST00000467985 MORN5Q5VZ52 161 aa13.56□□□□□ -0.24
COL7A1-207ENST00000467985 OR2G3Q8NGZ4 309 aa13.56□□□□□ -0.24
COL7A1-207ENST00000467985 LINC01587Q99440 93 aa13.56□□□□□ -0.24
COL7A1-207ENST00000467985 SH3BGRL3Q9H299 93 aa13.56□□□□□ -0.24
COL7A1-207ENST00000467985 SLC17A3O00476 420 aa13.55□□□□□ -0.24
COL7A1-207ENST00000467985 SNRPCP09234 159 aaKnown RBP13.55□□□□□ -0.24
COL7A1-207ENST00000467985 HTN3P15516 51 aa13.55□□□□□ -0.24
COL7A1-207ENST00000467985 TAS2R60P59551 318 aa13.55□□□□□ -0.24
COL7A1-207ENST00000467985 SLC51BQ86UW2 128 aa13.55□□□□□ -0.24
COL7A1-207ENST00000467985 SAT2Q96F10 170 aaPredicted RBP13.55□□□□□ -0.24
COL7A1-207ENST00000467985 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
COL7A1-207ENST00000467985 H3BQ15 152 aa13.54□□□□□ -0.24
COL7A1-207ENST00000467985 ZNF253O75346 499 aa13.54□□□□□ -0.24
COL7A1-207ENST00000467985 SERF2P84101 59 aa13.54□□□□□ -0.24
COL7A1-207ENST00000467985 AKR1C8PQ5T2L2 129 aa13.54□□□□□ -0.24
COL7A1-207ENST00000467985 C20orf144Q9BQM9 153 aa13.54□□□□□ -0.24
COL7A1-207ENST00000467985 TRAV5A0A0B4J249 113 aa13.53□□□□□ -0.24
COL7A1-207ENST00000467985 H3BTX0 84 aa13.53□□□□□ -0.24
COL7A1-207ENST00000467985 MBP02144 154 aa13.53□□□□□ -0.24
COL7A1-207ENST00000467985 EIF5AL1Q6IS14 154 aaKnown RBP13.53□□□□□ -0.24
COL7A1-207ENST00000467985 ZNF493Q6ZR52 646 aa13.53□□□□□ -0.24
COL7A1-207ENST00000467985 STOML3Q8TAV4 291 aa13.53□□□□□ -0.24
COL7A1-207ENST00000467985 C16orf74Q96GX8 76 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms