RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CXCL2P19875 107 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 ATP5IP56385 69 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-203ENST00000467533 RAB11AP62491 216 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 RNASE10Q5GAN6 216 aaKnown RBP6.66□□□□□ -1.34
HDAC3-203ENST00000467533 IBA57Q5T440 356 aaKnown RBP6.66□□□□□ -1.34
HDAC3-203ENST00000467533 LCN15Q6UWW0 184 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 SAMD12Q8N8I0 201 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 OR13C8Q8NGS7 320 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 ODF3Q96PU9 254 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 SLC50A1Q9BRV3 221 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 PAXXQ9BUH6 204 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 ZNF331Q9NQX6 463 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-203ENST00000467533 HSPB7Q9UBY9 170 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 BOLA1Q9Y3E2 137 aa6.66□□□□□ -1.34
HDAC3-203ENST00000467533 TEX13DA0A0J9YY54 714 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-203ENST00000467533 LOC100131303A0A0U1RQF7 123 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 LOC100506127A0A0U1RQW1 187 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 PMS2P5A8MQ11 134 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 SNRPCP09234 159 aaKnown RBP6.65□□□□□ -1.34
HDAC3-203ENST00000467533 OR5G3P0C626 314 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 ANXA7P20073 488 aaKnown RBP6.65□□□□□ -1.34
HDAC3-203ENST00000467533 AKR1C1Q04828 323 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 BTN1A1Q13410 526 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 SH2D6Q7Z4S9 175 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 SNX29P2Q8IUI4 249 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 Q8N976 141 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 GLYATL2Q8WU03 294 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 ZNF479Q96JC4 524 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 CNBD2Q96M20 576 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 ARPC5LQ9BPX5 153 aa6.65□□□□□ -1.34
HDAC3-203ENST00000467533 RGS13O14921 159 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 HYPMO75409 117 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 TIRAPP58753 221 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 SCGB2B2Q4G0G5 96 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 IQCF2Q8IXL9 164 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 HSD17B11Q8NBQ5 300 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 ATP6V0E2Q8NHE4 81 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 MARCH1Q8TCQ1 289 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 NAA60Q9H7X0 242 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 BLOC1S6Q9UL45 172 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 TP53TG3Q9ULZ0 132 aa6.64□□□□□ -1.35
HDAC3-203ENST00000467533 C14orf166Q9Y224 244 aaKnown RBP6.64□□□□□ -1.35
HDAC3-203ENST00000467533 TRAV8-3A0A0A6YYJ7 113 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 A0A0U1RQV1 116 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 TMEM127O75204 238 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 MPDU1O75352 247 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 IL5P05113 134 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 IAPPP10997 89 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 CD300CQ08708 224 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 SMCO1Q147U7 214 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 S100A7AQ86SG5 101 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 OR10G4Q8NGN3 311 aa6.63□□□□□ -1.35
HDAC3-203ENST00000467533 H3BTX0 84 aa6.62□□□□□ -1.35
HDAC3-203ENST00000467533 SLC17A3O00476 420 aa6.62□□□□□ -1.35
HDAC3-203ENST00000467533 MRPS12O15235 138 aaKnown RBP6.62□□□□□ -1.35
HDAC3-203ENST00000467533 LINC00869P0C866 280 aa6.62□□□□□ -1.35
HDAC3-203ENST00000467533 RNASE4P34096 147 aaKnown RBP6.62□□□□□ -1.35
HDAC3-203ENST00000467533 CCR6P51684 374 aa6.62□□□□□ -1.35
HDAC3-203ENST00000467533 CYP2G1PQ6ZSU1 146 aa6.62□□□□□ -1.35
HDAC3-203ENST00000467533 ACOT7LQ6ZUV0 252 aa6.62□□□□□ -1.35
HDAC3-203ENST00000467533 OR10P1Q8NGE3 313 aa6.62□□□□□ -1.35
HDAC3-203ENST00000467533 COX11Q9Y6N1 276 aa6.62□□□□□ -1.35
HDAC3-203ENST00000467533 A0A0D9SG52 128 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 SMCO3A2RU48 225 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 RNF222A6NCQ9 220 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 KLLNB2CW77 178 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 CD3DP04234 171 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 AKR1C4P17516 323 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 TOR2AQ5JU69 321 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 Q8N3U1 123 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 TERB2Q8NHR7 220 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 PRR13Q9NZ81 148 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 RNF24Q9Y225 148 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 PXMP4Q9Y6I8 212 aa6.61□□□□□ -1.35
HDAC3-203ENST00000467533 IGHV1OR15-1A0A075B7D0 117 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 SMIM31A0A1B0GVY4 71 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 OR4E1P0C645 316 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 GABARAPL2P60520 117 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 OPCMLQ14982 345 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 FFAR4Q5NUL3 377 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 CROCCP3Q8IVE0 287 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 RMI2Q96E14 147 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 LINC01600Q96MT4 127 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 ARL6Q9H0F7 186 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 ARV1Q9H2C2 271 aa6.6□□□□□ -1.35
HDAC3-203ENST00000467533 IGKV2D-24A0A075B6R9 120 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 TRAV4A0A0B4J268 109 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 GGTLC3B5MD39 225 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 PRSS46E5RG02 174 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 GPX1P07203 203 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 PFN1P07737 140 aaKnown RBP6.59□□□□□ -1.35
HDAC3-203ENST00000467533 PLP1P60201 277 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 ERCC8Q13216 396 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 FAM122CQ6P4D5 195 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 BPIFA4PQ86YQ2 179 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 OR4D10Q8NGI6 311 aa6.59□□□□□ -1.35
HDAC3-203ENST00000467533 RTBDNQ9BSG5 229 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-203ENST00000467533 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.36
HDAC3-203ENST00000467533 A0A087WXM4 84 aa6.58□□□□□ -1.36
HDAC3-203ENST00000467533 TRAV8-1A0A0A6YYK1 113 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms