RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 CLPSL1A2RUU4 121 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 TEX46H3BTG2 121 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 HMGB3O15347 200 aaKnown RBP5.07□□□□□ -1.6
SPTA1-203ENST00000465741 COX7A2P2O60397 106 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 SCGB2A1O75556 95 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 NMBP08949 121 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 OR5G3P0C626 314 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 CD28P10747 220 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 MT3P25713 68 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 FCGR2BP31994 310 aaPredicted RBP5.07□□□□□ -1.6
SPTA1-203ENST00000465741 LYZP61626 148 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 CLLU1Q5K131 121 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 ADAMTSL4-AS1Q5T5F5 129 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 SPATA31B1PQ5VZV4 182 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 ZNF343Q6P1L6 599 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 LCN15Q6UWW0 184 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 PATE2Q6UY27 113 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 RPP25LQ8N5L8 163 aaKnown RBP5.07□□□□□ -1.6
SPTA1-203ENST00000465741 COMMD1Q8N668 190 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 OR51G1Q8NGK1 321 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 OR1B1Q8NGR6 318 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 SPATA3Q8NHX4 192 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 SFT2D1Q8WV19 159 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 TMEM37Q8WXS4 190 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 PBDC1Q9BVG4 233 aa5.07□□□□□ -1.6
SPTA1-203ENST00000465741 ACTR3CQ9C0K3 210 aaPredicted RBP5.07□□□□□ -1.6
SPTA1-203ENST00000465741 PEF1Q9UBV8 284 aaKnown RBP5.07□□□□□ -1.6
SPTA1-203ENST00000465741 PUS1Q9Y606 427 aaKnown RBP eCLIP5.07□□□□□ -1.6
SPTA1-203ENST00000465741 TRAV5A0A0B4J249 113 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 WI2-2373I1.2A0A1W2PRP0 233 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 TGOLN2O43493 480 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 GGCTO75223 188 aaKnown RBP5.06□□□□□ -1.6
SPTA1-203ENST00000465741 IL4P05112 153 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 RHOBP62745 196 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 CCL20P78556 96 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 ZNF726P1Q15940 193 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 FAM78BQ5VT40 261 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 C10orf113Q5VZT2 155 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 TOMM20LQ6UXN7 152 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 DPPA3Q6W0C5 159 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 ZNF600Q6ZNG1 722 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 MIR17HGQ75NE6 70 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 OR1L4Q8NGR5 311 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 LRRC20Q8TCA0 184 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 MYOZ3Q8TDC0 251 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 MBD3L1Q8WWY6 194 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 TMEM158Q8WZ71 300 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 UBE2E2Q96LR5 201 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 SLC25A22Q9H936 323 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 PYGO1Q9Y3Y4 419 aa5.06□□□□□ -1.6
SPTA1-203ENST00000465741 CTXND1A0A1B0GTU2 59 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 SEC14L6B5MCN3 397 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 ZNF207O43670 478 aaKnown RBP5.05□□□□□ -1.6
SPTA1-203ENST00000465741 SAP30O75446 220 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 HSPB1P04792 205 aaKnown RBP5.05□□□□□ -1.6
SPTA1-203ENST00000465741 CDC34P49427 236 aaPredicted RBP5.05□□□□□ -1.6
SPTA1-203ENST00000465741 FGF8P55075 233 aaPredicted RBP5.05□□□□□ -1.6
SPTA1-203ENST00000465741 XGP55808 180 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 PLP1P60201 277 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 LEMD1Q68G75 181 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 Q6ZTC4 211 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 SSX7Q7RTT5 188 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 NOTCH2NLQ7Z3S9 236 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 LINC00305Q7Z4B0 112 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 SLC7A5P1Q8MH63 180 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.05□□□□□ -1.6
SPTA1-203ENST00000465741 ZNF414Q96IQ9 312 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 ATP6V0BQ99437 205 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 C20orf24Q9BUV8 137 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 C19orf24Q9BVV8 132 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 TECRQ9NZ01 308 aaKnown RBP5.05□□□□□ -1.6
SPTA1-203ENST00000465741 MRPL27Q9P0M9 148 aaKnown RBP5.05□□□□□ -1.6
SPTA1-203ENST00000465741 FUT9Q9Y231 359 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 HIGD1AQ9Y241 93 aa5.05□□□□□ -1.6
SPTA1-203ENST00000465741 A0A087WZ39 114 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 IGHV3-49A0A0A0MS15 119 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 TRAV1-1A0A0B4J248 108 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 MAP1LC3B2A6NCE7 125 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 LINC00862A6NCI5 91 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 I3L521 148 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 LGALS1P09382 135 aaKnown RBP5.04□□□□□ -1.6
SPTA1-203ENST00000465741 C8orf88P0DMB2 117 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 KRTAP10-3P60369 221 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 USF2Q15853 346 aaPredicted RBP5.04□□□□□ -1.6
SPTA1-203ENST00000465741 RPEL1Q2QD12 228 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 FAM106AQ4KMX7 169 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 UNQ9165/PRO28630Q6UXU0 137 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 IQCF2Q8IXL9 164 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 OR1N2Q8NGR9 330 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 MARC2Q969Z3 335 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 C2orf48Q96LS8 159 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 PFDN5Q99471 154 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 RNF2Q99496 336 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 SHANK2-AS3Q9BTD1 123 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 SLC25A39Q9BZJ4 359 aaPredicted RBP5.04□□□□□ -1.6
SPTA1-203ENST00000465741 MAP1LC3BQ9GZQ8 125 aa5.04□□□□□ -1.6
SPTA1-203ENST00000465741 TET2Q6N021 2002 aaPredicted RBP5.03□□□□□ -1.6
SPTA1-203ENST00000465741 IGHV3OR16-13A0A075B7E8 117 aa5.03□□□□□ -1.6
SPTA1-203ENST00000465741 A0A087X0K7 114 aa5.03□□□□□ -1.6
SPTA1-203ENST00000465741 IGHV3-74A0A0B4J1X5 117 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms