RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 INSP01308 110 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 SPART-AS1P0CW21 52 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 HIST1H1EP10412 219 aaKnown RBP9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 WFDC1Q9HC57 220 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 PLA2G2EQ9NZK7 142 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 DKK2Q9UBU2 259 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 APLNQ9ULZ1 77 aa9.11□□□□□ -0.95
PRPF40A-203ENST00000448428 RYR2Q92736 4967 aa9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 DEFB131BA0A096LNP1 70 aa9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 ZNF705GA8MUZ8 300 aaPredicted RBP9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 IFNA5P01569 189 aa9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 FAM222AQ5U5X8 452 aa9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 RPP25LQ8N5L8 163 aaKnown RBP9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 OR10J6PQ8NGY7 276 aa9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 SCGB1C1Q8TD33 95 aa9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 BLNKQ8WV28 456 aa9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 KCNIP2Q9NS61 270 aa9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 YTHDF2Q9Y5A9 579 aaKnown RBP9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 TIMM9Q9Y5J7 89 aa9.1□□□□□ -0.95
PRPF40A-203ENST00000448428 SACSQ9NZJ4 4579 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 M0R3E3 92 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 NBEAP1P0C6P0 100 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 AZU1P20160 251 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 CDKN1BP46527 198 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 TCTAP57738 103 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 KIR3DS1Q14943 382 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 FFAR4Q5NUL3 377 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 LGALS9CQ6DKI2 356 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 EXOC3-AS1Q8N2X6 119 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 LINC01587Q99440 93 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 MRPL32Q9BYC8 188 aaKnown RBP9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 PARD6GQ9BYG4 376 aaPredicted RBP9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 OR51M1Q9H341 326 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 FUT9Q9Y231 359 aa9.09□□□□□ -0.95
PRPF40A-203ENST00000448428 IGHV4-4A0A075B6R2 117 aa9.08□□□□□ -0.96
PRPF40A-203ENST00000448428 NPIPB6E9PJ23 425 aa9.08□□□□□ -0.96
PRPF40A-203ENST00000448428 CT45A10P0DMU9 189 aa9.08□□□□□ -0.96
PRPF40A-203ENST00000448428 PDE6HQ13956 83 aa9.08□□□□□ -0.96
PRPF40A-203ENST00000448428 Q5BKY6 102 aa9.08□□□□□ -0.96
PRPF40A-203ENST00000448428 FXYD5Q96DB9 178 aa9.08□□□□□ -0.96
PRPF40A-203ENST00000448428 MRPL53Q96EL3 112 aaKnown RBP9.08□□□□□ -0.96
PRPF40A-203ENST00000448428 NIPSNAP3BQ9BS92 247 aa9.08□□□□□ -0.96
PRPF40A-203ENST00000448428 PRELID1Q9Y255 219 aa9.08□□□□□ -0.96
PRPF40A-203ENST00000448428 TEX48A0A1B0GUV7 120 aa9.07□□□□□ -0.96
PRPF40A-203ENST00000448428 OR10J4P0C629 311 aa9.07□□□□□ -0.96
PRPF40A-203ENST00000448428 TSPOP30536 169 aa9.07□□□□□ -0.96
PRPF40A-203ENST00000448428 ICAM4Q14773 271 aa9.07□□□□□ -0.96
PRPF40A-203ENST00000448428 TMEM256Q8N2U0 113 aa9.07□□□□□ -0.96
PRPF40A-203ENST00000448428 RNF141Q8WVD5 230 aa9.07□□□□□ -0.96
PRPF40A-203ENST00000448428 ZNF503Q96F45 646 aa9.07□□□□□ -0.96
PRPF40A-203ENST00000448428 PAXXQ9BUH6 204 aa9.07□□□□□ -0.96
PRPF40A-203ENST00000448428 PLAC8L1A1L4L8 177 aa9.06□□□□□ -0.96
PRPF40A-203ENST00000448428 HTN1P15515 57 aa9.06□□□□□ -0.96
PRPF40A-203ENST00000448428 TAS2R60P59551 318 aa9.06□□□□□ -0.96
PRPF40A-203ENST00000448428 ERCC8Q13216 396 aa9.06□□□□□ -0.96
PRPF40A-203ENST00000448428 OXA1LQ15070 435 aa9.06□□□□□ -0.96
PRPF40A-203ENST00000448428 RGS21Q2M5E4 152 aa9.06□□□□□ -0.96
PRPF40A-203ENST00000448428 ODF3Q96PU9 254 aa9.06□□□□□ -0.96
PRPF40A-203ENST00000448428 AGPAT4-IT1Q9H0P7 198 aa9.06□□□□□ -0.96
PRPF40A-203ENST00000448428 AAMDCQ9H7C9 122 aa9.06□□□□□ -0.96
PRPF40A-203ENST00000448428 PLECQ15149 4684 aaKnown RBP9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 J3KRW8 73 aa9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 OR7C2O60412 319 aa9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 EIF3GO75821 320 aaKnown RBP eCLIP9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 GIPP09681 153 aaPredicted RBP9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 GFI1BQ5VTD9 330 aa9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 LINC00477Q96M19 166 aa9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 AQP10Q96PS8 301 aa9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 C20orf144Q9BQM9 153 aa9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
PRPF40A-203ENST00000448428 TRAV12-3A0A0B4J271 114 aa9.04□□□□□ -0.96
PRPF40A-203ENST00000448428 H7BYZ3 331 aa9.04□□□□□ -0.96
PRPF40A-203ENST00000448428 LEPP41159 167 aa9.04□□□□□ -0.96
PRPF40A-203ENST00000448428 DAD1P61803 113 aa9.04□□□□□ -0.96
PRPF40A-203ENST00000448428 RANP62826 216 aaKnown RBP9.04□□□□□ -0.96
PRPF40A-203ENST00000448428 FAM122CQ6P4D5 195 aa9.04□□□□□ -0.96
PRPF40A-203ENST00000448428 C9orf47Q6ZRZ4 202 aa9.04□□□□□ -0.96
PRPF40A-203ENST00000448428 ASB13Q8WXK3 278 aa9.04□□□□□ -0.96
PRPF40A-203ENST00000448428 PHYHIPLQ96FC7 376 aa9.04□□□□□ -0.96
PRPF40A-203ENST00000448428 IGKV2-40A0A087WW87 121 aaPredicted RBP9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 IGKV2D-40P01614 121 aaPredicted RBP9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 HTN3P15516 51 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 M6PRP20645 277 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 TAS2R45P59539 299 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 RAB2AP61019 212 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 ACOT6Q3I5F7 207 aaPredicted RBP9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 KHDC3LQ587J8 217 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 RNASE8Q8TDE3 154 aaKnown RBP9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 C16orf74Q96GX8 76 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 FAM19A4Q96LR4 140 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 VGLL1Q99990 258 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 NDUFAF3Q9BU61 184 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 ALMS1Q8TCU4 4167 aa9.03□□□□□ -0.96
PRPF40A-203ENST00000448428 DNAH1Q9P2D7 4330 aa9.02□□□□□ -0.96
PRPF40A-203ENST00000448428 SLC25A5P05141 298 aaKnown RBP9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 DEFB130BP0DP73 79 aa9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 DEFB130AP0DP74 79 aa9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 UBE2L3P68036 154 aaKnown RBP9.02□□□□□ -0.97
PRPF40A-203ENST00000448428 ZNF266Q14584 549 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms