RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 RRN3P1Q2M238 152 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 RPL39P5Q59GN2 51 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 Q6ZT83 130 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 TMEM167AQ8TBQ9 72 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 C20orf78Q9BR46 151 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 OBP2BQ9NPH6 170 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 NXT2Q9NPJ8 142 aaKnown RBP4.07□□□□□ -1.76
RIF1-203ENST00000428287 SELENOKQ9Y6D0 94 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 IGLV2-18A0A075B6J9 118 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 NKX2-8O15522 239 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 FOXI1Q12951 378 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 GAGE5Q13069 117 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 GAGE6Q13070 117 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 C3AR1Q16581 482 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 SPRY4Q9C004 299 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 CALYQ9NYX4 217 aa4.07□□□□□ -1.76
RIF1-203ENST00000428287 K7EM74 188 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 CHEK1O14757 476 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 FAM106CPP0CH98 169 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 INSL3P51460 131 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 ALKBH6Q3KRA9 238 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 FAM106AQ4KMX7 169 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 GAGE13Q4V321 117 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 CD177Q8N6Q3 437 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 THYN1Q9P016 225 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 ZNF826PQ6ZT77 177 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 CIARTQ8N365 385 aaPredicted RBP4.06□□□□□ -1.76
RIF1-203ENST00000428287 SLC25A39Q9BZJ4 359 aaPredicted RBP4.06□□□□□ -1.76
RIF1-203ENST00000428287 NSD1Q96L73 2696 aaPredicted RBP4.06□□□□□ -1.76
RIF1-203ENST00000428287 STAB1Q9NY15 2570 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 RHODO00212 210 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 SAA2P0DJI9 122 aaPredicted RBP4.06□□□□□ -1.76
RIF1-203ENST00000428287 DCTN5Q9BTE1 182 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 CYSLTR1Q9Y271 337 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 KLF13Q9Y2Y9 288 aaPredicted RBP4.06□□□□□ -1.76
RIF1-203ENST00000428287 TRBV20-1A0A075B6N2 111 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 SPAARA0A1B0GVQ0 90 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 SERTM2A0A1B0GWG4 89 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 IGLL5B9A064 214 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 CD24P25063 80 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 CEBPDP49716 269 aaPredicted RBP4.06□□□□□ -1.76
RIF1-203ENST00000428287 C8orf31Q8N9H6 132 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 OR10X1Q8NGY0 326 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 NPIPB3Q92617 1050 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 FAM173AQ9BQD7 235 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 TRAV5A0A0B4J249 113 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 CEACAM4O75871 244 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 LINC00305Q7Z4B0 112 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 CEND1Q8N111 149 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 KLK10O43240 276 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 ACP1P24666 158 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 ATP5G2Q06055 141 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 TBC1D28Q2M2D7 210 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 Q6Q795 121 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 PGLYRP4Q96LB8 373 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 ERG28Q9UKR5 140 aa4.06□□□□□ -1.76
RIF1-203ENST00000428287 C16orf97H3BN30 126 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 GOSR1O95249 250 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 ZC2HC1BQ5TFG8 222 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 MBNL2Q5VZF2 373 aaKnown RBP4.05□□□□□ -1.76
RIF1-203ENST00000428287 GUSBP11Q6P575 273 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 Q86TA4 180 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 LINC00311Q8N616 119 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 F8VRH5 84 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 MRPS12O15235 138 aaKnown RBP4.05□□□□□ -1.76
RIF1-203ENST00000428287 KLF17Q5JT82 389 aaPredicted RBP4.05□□□□□ -1.76
RIF1-203ENST00000428287 UTF1Q5T230 341 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 NFE4Q86UQ8 179 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 TMEM75Q8N9X5 138 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 CXXC4Q9H2H0 198 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 A0A1W2PPI3 338 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 K7EMI3 77 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 MZT1Q08AG7 82 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 LTC4SQ16873 150 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 C12orf74Q32Q52 190 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 SNAI2O43623 268 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 MRGPRG-AS1Q2M3A8 158 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 C10orf113Q5VZT2 155 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 SAP25Q8TEE9 199 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 RAB37Q96AX2 223 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 NAA38Q9BRA0 125 aaKnown RBP4.05□□□□□ -1.76
RIF1-203ENST00000428287 GRPP07492 148 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 ZNF833PQ6ZTB9 187 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 ENY2Q9NPA8 101 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 MRPS17Q9Y2R5 130 aaKnown RBP4.05□□□□□ -1.76
RIF1-203ENST00000428287 IGLV3-9A0A075B6K5 115 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 H0Y8G0 127 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 Q0VFX4 171 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 ZNRF1Q8ND25 227 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 C1QTNF4Q9BXJ3 329 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 TENM1Q9UKZ4 2725 aa4.05□□□□□ -1.76
RIF1-203ENST00000428287 ATP5LO75964 103 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 IGLC6P0CF74 106 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 XGP55808 180 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 ASPHD1Q5U4P2 390 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 OTORQ9NRC9 128 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 CENPVL3A0A0U1RRI6 287 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 TMEM8BA6NDV4 472 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 ASIPP42127 132 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms