RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TSPAN5P62079 268 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 SPHARQ15513 63 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 C2orf83Q53S99 150 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 LPCAT3Q6P1A2 487 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 TMEM91Q6ZNR0 172 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 EIF4E3Q8N5X7 224 aaKnown RBP4.05□□□□□ -1.76
SDCBP-203ENST00000424270 OR5H2Q8NGV7 314 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 GTSF1Q8WW33 167 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 CDIP1Q9H305 208 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 KIF25-AS1Q9Y6Z4 181 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 URGCP-MRPS24S4R325 110 aa4.05□□□□□ -1.76
SDCBP-203ENST00000424270 LOC100131303A0A0U1RQF7 123 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 LINC00854A0A1B0GVQ3 168 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 PHOX2AO14813 284 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 CXCL3P19876 107 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 RAB3BP20337 219 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 TCL1AP56279 114 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 KRTAP10-8P60410 259 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 RAB32Q13637 225 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 VWC2Q2TAL6 325 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 BSXQ3C1V8 233 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 MAJINQ3KP22 176 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 LYSMD2Q8IV50 215 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 BPIFCQ8NFQ6 507 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 OR4D5Q8NGN0 318 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 FXYD6Q9H0Q3 95 aa4.04□□□□□ -1.76
SDCBP-203ENST00000424270 PAIP2BQ9ULR5 123 aaKnown RBP4.04□□□□□ -1.76
SDCBP-203ENST00000424270 TRAV34A0A0B4J273 112 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 IGKV1-5P01602 117 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 PFN1P07737 140 aaKnown RBP4.03□□□□□ -1.76
SDCBP-203ENST00000424270 RPL7P18124 248 aaKnown RBP4.03□□□□□ -1.76
SDCBP-203ENST00000424270 ANXA7P20073 488 aaKnown RBP4.03□□□□□ -1.76
SDCBP-203ENST00000424270 TAS2R46P59540 309 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 RAP2BP61225 183 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 FABP5Q01469 135 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 GGNBP1Q5YKI7 109 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 DAZ4Q86SG3 579 aaKnown RBP4.03□□□□□ -1.76
SDCBP-203ENST00000424270 C11orf72Q8NBR9 251 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 ZNF479Q96JC4 524 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 C2orf50Q96LR7 162 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 VCXQ9H320 206 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 Q9H521 79 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 ACOT13Q9NPJ3 140 aa4.03□□□□□ -1.76
SDCBP-203ENST00000424270 DAZ3Q9NR90 486 aaKnown RBP4.03□□□□□ -1.76
SDCBP-203ENST00000424270 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.03□□□□□ -1.76
SDCBP-203ENST00000424270 C7orf71A4D174 169 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 A4D1N5 150 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 FAM231BA6NCW3 169 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 CFDP00746 253 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-203ENST00000424270 SEC11BP0C7V7 166 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 MALP21145 153 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 RNASE4P34096 147 aaKnown RBP4.02□□□□□ -1.77
SDCBP-203ENST00000424270 TIRAPP58753 221 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 KCNIP4Q6PIL6 250 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 DHRS11Q6UWP2 260 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 OR4C5Q8NGB2 326 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 ZNF431Q8TF32 576 aaPredicted RBP4.02□□□□□ -1.77
SDCBP-203ENST00000424270 AUNIPQ9H7T9 357 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 C8orf4Q9NR00 106 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 RHBDL2Q9NX52 303 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 PSORS1C1Q9UIG5 152 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 VAX2Q9UIW0 290 aa4.02□□□□□ -1.77
SDCBP-203ENST00000424270 IGHV3-16A0A0C4DH30 117 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 H7C1H1 209 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 MPDU1O75352 247 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 HLA-DQA1P01909 254 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 SLC25A5P05141 298 aaKnown RBP4.01□□□□□ -1.77
SDCBP-203ENST00000424270 SNRPCP09234 159 aaKnown RBP4.01□□□□□ -1.77
SDCBP-203ENST00000424270 OR5G3P0C626 314 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 OR10J4P0C629 311 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 ANXA2RQ3ZCQ2 193 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 IBA57Q5T440 356 aaKnown RBP4.01□□□□□ -1.77
SDCBP-203ENST00000424270 SPINK6Q6UWN8 80 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 IZUMO2Q6UXV1 221 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 C8orf59Q8N0T1 100 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-203ENST00000424270 LGI3Q8N145 548 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 PACRGLQ8N7B6 248 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 OR10P1Q8NGE3 313 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 UBE2WQ96B02 151 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 PRADC1Q9BSG0 188 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 SH3BGRL3Q9H299 93 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 OR51M1Q9H341 326 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 RAB26Q9ULW5 256 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 SLC45A2Q9UMX9 530 aa4.01□□□□□ -1.77
SDCBP-203ENST00000424270 IGKV1D-37A0A075B6S9 117 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 TRAV1-2A0A0B4J238 106 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 TEX13DA0A0J9YY54 714 aaPredicted RBP4□□□□□ -1.77
SDCBP-203ENST00000424270 C3orf85A0A1B0GTC6 90 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 TNFAIP8O95379 198 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 GPX1P07203 203 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 CT45A10P0DMU9 189 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 HLA-DMAP28067 261 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 CACNG7P62955 275 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 PRR3P79522 188 aaKnown RBP4□□□□□ -1.77
SDCBP-203ENST00000424270 SRSF3P84103 164 aaKnown RBP4□□□□□ -1.77
SDCBP-203ENST00000424270 BTN1A1Q13410 526 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 SP6Q3SY56 376 aa4□□□□□ -1.77
SDCBP-203ENST00000424270 GPR107Q5VW38 600 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms