RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 C11orf94C9JXX5 98 aa14.71□□□□□ -0.05
PKNOX1-202ENST00000418336 KIR3DS1Q14943 382 aa14.71□□□□□ -0.05
PKNOX1-202ENST00000418336 C2CD4CQ8TF44 421 aa14.71□□□□□ -0.05
PKNOX1-202ENST00000418336 ZNF503Q96F45 646 aa14.71□□□□□ -0.05
PKNOX1-202ENST00000418336 PARD6GQ9BYG4 376 aaPredicted RBP14.71□□□□□ -0.05
PKNOX1-202ENST00000418336 DKK2Q9UBU2 259 aa14.71□□□□□ -0.05
PKNOX1-202ENST00000418336 TMEM189A5PLL7 270 aa14.7□□□□□ -0.06
PKNOX1-202ENST00000418336 HIST1H1EP10412 219 aaKnown RBP14.7□□□□□ -0.06
PKNOX1-202ENST00000418336 Q5BKY6 102 aa14.7□□□□□ -0.06
PKNOX1-202ENST00000418336 LOC102723971A0A1B0GUV8 181 aa14.69□□□□□ -0.06
PKNOX1-202ENST00000418336 M0R3E3 92 aa14.69□□□□□ -0.06
PKNOX1-202ENST00000418336 INSP01308 110 aa14.69□□□□□ -0.06
PKNOX1-202ENST00000418336 SMIM3Q9BZL3 60 aa14.69□□□□□ -0.06
PKNOX1-202ENST00000418336 TRAV10A0A0B4J240 114 aa14.68□□□□□ -0.06
PKNOX1-202ENST00000418336 NPIPB6E9PJ23 425 aa14.68□□□□□ -0.06
PKNOX1-202ENST00000418336 AZU1P20160 251 aa14.68□□□□□ -0.06
PKNOX1-202ENST00000418336 PDE6HQ13956 83 aa14.68□□□□□ -0.06
PKNOX1-202ENST00000418336 FXYD5Q96DB9 178 aa14.68□□□□□ -0.06
PKNOX1-202ENST00000418336 MRPL53Q96EL3 112 aaKnown RBP14.68□□□□□ -0.06
PKNOX1-202ENST00000418336 PLA2G2EQ9NZK7 142 aa14.68□□□□□ -0.06
PKNOX1-202ENST00000418336 ZNF705GA8MUZ8 300 aaPredicted RBP14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 LY6G6CO95867 125 aa14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 HBE1P02100 147 aa14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 CDKN1BP46527 198 aa14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 FAM222AQ5U5X8 452 aa14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 LGALS9CQ6DKI2 356 aa14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 RPP25LQ8N5L8 163 aaKnown RBP14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 FAM19A4Q96LR4 140 aa14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 MRPL32Q9BYC8 188 aaKnown RBP14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 FUT9Q9Y231 359 aa14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 YTHDF2Q9Y5A9 579 aaKnown RBP14.67□□□□□ -0.06
PKNOX1-202ENST00000418336 SPART-AS1P0CW21 52 aa14.66□□□□□ -0.06
PKNOX1-202ENST00000418336 CT45A10P0DMU9 189 aa14.66□□□□□ -0.06
PKNOX1-202ENST00000418336 EMP1P54849 157 aa14.66□□□□□ -0.06
PKNOX1-202ENST00000418336 RHOBP62745 196 aa14.66□□□□□ -0.06
PKNOX1-202ENST00000418336 OXA1LQ15070 435 aa14.66□□□□□ -0.06
PKNOX1-202ENST00000418336 RRN3P1Q2M238 152 aa14.66□□□□□ -0.06
PKNOX1-202ENST00000418336 MED28Q9H204 178 aa14.66□□□□□ -0.06
PKNOX1-202ENST00000418336 KCNIP2Q9NS61 270 aa14.66□□□□□ -0.06
PKNOX1-202ENST00000418336 IGLL5B9A064 214 aa14.65□□□□□ -0.06
PKNOX1-202ENST00000418336 C17orf112F2Z3M2 114 aa14.65□□□□□ -0.06
PKNOX1-202ENST00000418336 G3V3Q6 166 aa14.65□□□□□ -0.06
PKNOX1-202ENST00000418336 TSPOP30536 169 aa14.65□□□□□ -0.06
PKNOX1-202ENST00000418336 TCTAP57738 103 aa14.65□□□□□ -0.06
PKNOX1-202ENST00000418336 EXOC3-AS1Q8N2X6 119 aa14.65□□□□□ -0.06
PKNOX1-202ENST00000418336 AQP10Q96PS8 301 aa14.65□□□□□ -0.06
PKNOX1-202ENST00000418336 ODF3Q96PU9 254 aa14.65□□□□□ -0.06
PKNOX1-202ENST00000418336 OR51M1Q9H341 326 aa14.65□□□□□ -0.06
PKNOX1-202ENST00000418336 IGHV4-4A0A075B6R2 117 aa14.64□□□□□ -0.07
PKNOX1-202ENST00000418336 DEFB131BA0A096LNP1 70 aa14.64□□□□□ -0.07
PKNOX1-202ENST00000418336 GFI1BQ5VTD9 330 aa14.64□□□□□ -0.07
PKNOX1-202ENST00000418336 DNAH2Q9P225 4427 aa14.64□□□□□ -0.07
PKNOX1-202ENST00000418336 GIPP09681 153 aaPredicted RBP14.63□□□□□ -0.07
PKNOX1-202ENST00000418336 FFAR4Q5NUL3 377 aa14.63□□□□□ -0.07
PKNOX1-202ENST00000418336 OR10J6PQ8NGY7 276 aa14.63□□□□□ -0.07
PKNOX1-202ENST00000418336 BLNKQ8WV28 456 aa14.63□□□□□ -0.07
PKNOX1-202ENST00000418336 PHYHIPLQ96FC7 376 aa14.63□□□□□ -0.07
PKNOX1-202ENST00000418336 EIF3GO75821 320 aaKnown RBP eCLIP14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 OR10J4P0C629 311 aa14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 NBEAP1P0C6P0 100 aa14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 ERCC8Q13216 396 aa14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 RGS21Q2M5E4 152 aa14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 TMEM256Q8N2U0 113 aa14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 RNF141Q8WVD5 230 aa14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 NIPSNAP3BQ9BS92 247 aa14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 PAXXQ9BUH6 204 aa14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 PRELID1Q9Y255 219 aa14.62□□□□□ -0.07
PKNOX1-202ENST00000418336 TEX48A0A1B0GUV7 120 aa14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 RNF222A6NCQ9 220 aa14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 IFNA5P01569 189 aa14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 TAS2R60P59551 318 aa14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 RNASE8Q8TDE3 154 aaKnown RBP14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 ASB13Q8WXK3 278 aa14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 C20orf144Q9BQM9 153 aa14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 TMEM208Q9BTX3 173 aa14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 AGPAT4-IT1Q9H0P7 198 aa14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 TIMM9Q9Y5J7 89 aa14.61□□□□□ -0.07
PKNOX1-202ENST00000418336 ICAM4Q14773 271 aa14.6□□□□□ -0.07
PKNOX1-202ENST00000418336 C9orf47Q6ZRZ4 202 aa14.6□□□□□ -0.07
PKNOX1-202ENST00000418336 SCGB1C1Q8TD33 95 aa14.6□□□□□ -0.07
PKNOX1-202ENST00000418336 FAT2Q9NYQ8 4349 aa14.6□□□□□ -0.07
PKNOX1-202ENST00000418336 KLLNB2CW77 178 aa14.59□□□□□ -0.07
PKNOX1-202ENST00000418336 LINC01587Q99440 93 aa14.59□□□□□ -0.07
PKNOX1-202ENST00000418336 IGKV2-40A0A087WW87 121 aaPredicted RBP14.58□□□□□ -0.08
PKNOX1-202ENST00000418336 IGKV2D-40P01614 121 aaPredicted RBP14.58□□□□□ -0.08
PKNOX1-202ENST00000418336 CRISP2P16562 243 aa14.58□□□□□ -0.08
PKNOX1-202ENST00000418336 RAB2AP61019 212 aa14.58□□□□□ -0.08
PKNOX1-202ENST00000418336 OR2G3Q8NGZ4 309 aa14.58□□□□□ -0.08
PKNOX1-202ENST00000418336 VGLL1Q99990 258 aa14.58□□□□□ -0.08
PKNOX1-202ENST00000418336 PPP1R14DQ9NXH3 145 aa14.58□□□□□ -0.08
PKNOX1-202ENST00000418336 TNFSF18Q9UNG2 199 aa14.58□□□□□ -0.08
PKNOX1-202ENST00000418336 LYRM9A8MSI8 78 aa14.57□□□□□ -0.08
PKNOX1-202ENST00000418336 H7BYZ3 331 aa14.57□□□□□ -0.08
PKNOX1-202ENST00000418336 ZNF324O75467 553 aaPredicted RBP14.57□□□□□ -0.08
PKNOX1-202ENST00000418336 M6PRP20645 277 aa14.57□□□□□ -0.08
PKNOX1-202ENST00000418336 LEPP41159 167 aa14.57□□□□□ -0.08
PKNOX1-202ENST00000418336 PRR9Q5T870 116 aa14.57□□□□□ -0.08
PKNOX1-202ENST00000418336 FAM122CQ6P4D5 195 aa14.57□□□□□ -0.08
PKNOX1-202ENST00000418336 LINC00477Q96M19 166 aa14.57□□□□□ -0.08
PKNOX1-202ENST00000418336 OR7C2O60412 319 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms