RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NPYP01303 97 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 C2orf66Q6UXQ4 117 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 Q8N8P6 123 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 SIP14410 1827 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 CSRP2Q16527 193 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 Q6ZS49 121 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 A0A087WX48 190 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 SBF1O95248 1867 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 C9orf139Q6ZV77 190 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 LYPD1Q8N2G4 141 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 TMEM14BQ9NUH8 114 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 MRPL35Q9NZE8 188 aaKnown RBP9.68□□□□□ -0.86
UBR4-205ENST00000417040 LY6G5BQ8NDX9 201 aa9.68□□□□□ -0.86
UBR4-205ENST00000417040 SPRY2O43597 315 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 TEX36Q5VZQ5 186 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 SVILO95425 2214 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 ABCA7Q8IZY2 2146 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 CEACAM8P31997 349 aaPredicted RBP9.67□□□□□ -0.86
UBR4-205ENST00000417040 ZNF492Q9P255 531 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 NTN3O00634 580 aaPredicted RBP9.67□□□□□ -0.86
UBR4-205ENST00000417040 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 TDRG1Q3Y452 100 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 ASXL3Q9C0F0 2248 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 ZNF503-AS2A6NEH8 195 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 PMVKQ15126 192 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 WDR86Q86TI4 376 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 CRIPAKQ8N1N5 446 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 PIP4P2Q8N4L2 257 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 NUPR1O60356 82 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 DIAPH2-AS1Q14236 149 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 FER1L5A0AVI2 2057 aa9.67□□□□□ -0.86
UBR4-205ENST00000417040 TRBV20-1A0A075B6N2 111 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 OVOL3O00110 214 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 DOCK11Q5JSL3 2073 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 NDUFB8O95169 186 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 GHRHP01286 108 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 YPEL3P61236 119 aaPredicted RBP9.66□□□□□ -0.86
UBR4-205ENST00000417040 C17orf77Q96MU5 243 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 SYNJ2BPP57105 145 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 IGFBPL1Q8WX77 278 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 C1orf147Q96MC9 270 aaPredicted RBP9.66□□□□□ -0.86
UBR4-205ENST00000417040 GAGE12JA6NER3 117 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 GAGE4Q13068 117 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 GAGE5Q13069 117 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 YLPM1P49750 1951 aaKnown RBP9.66□□□□□ -0.86
UBR4-205ENST00000417040 CACNA1DQ01668 2161 aa9.66□□□□□ -0.86
UBR4-205ENST00000417040 DEFB130BP0DP73 79 aa9.65□□□□□ -0.86
UBR4-205ENST00000417040 DEFB130AP0DP74 79 aa9.65□□□□□ -0.86
UBR4-205ENST00000417040 NDUFA4L2Q9NRX3 87 aa9.65□□□□□ -0.86
UBR4-205ENST00000417040 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
UBR4-205ENST00000417040 TRBV19A0A075B6N1 114 aa9.65□□□□□ -0.86
UBR4-205ENST00000417040 IGLC7A0M8Q6 106 aa9.65□□□□□ -0.86
UBR4-205ENST00000417040 ZNF883P0CG24 379 aa9.65□□□□□ -0.86
UBR4-205ENST00000417040 TRPT1Q86TN4 253 aaKnown RBP9.65□□□□□ -0.86
UBR4-205ENST00000417040 ANAPC10Q9UM13 185 aa9.65□□□□□ -0.86
UBR4-205ENST00000417040 SPACA3Q8IXA5 215 aa9.65□□□□□ -0.86
UBR4-205ENST00000417040 ATP6V0E1O15342 81 aa9.65□□□□□ -0.87
UBR4-205ENST00000417040 NDUFS7O75251 213 aa9.65□□□□□ -0.87
UBR4-205ENST00000417040 PLXND1Q9Y4D7 1925 aa9.65□□□□□ -0.87
UBR4-205ENST00000417040 FOXL2NBQ6ZUU3 175 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 PCP2Q8IVA1 136 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 G3V318 75 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 NXPH4O95158 308 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 C17orf58Q2M2W7 97 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 DTX2Q86UW9 622 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.64□□□□□ -0.87
UBR4-205ENST00000417040 SOCS3O14543 225 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 HLA-DMBP28068 263 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 DEFB131AP59861 70 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 SUMO4Q6EEV6 95 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 SH2D6Q7Z4S9 175 aa9.64□□□□□ -0.87
UBR4-205ENST00000417040 FNDC10F2Z333 226 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 TRACP01848 142 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 CD59P13987 128 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 SAA4P35542 130 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 C12orf74Q32Q52 190 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 LGALS9BQ3B8N2 356 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 LGALS9CQ6DKI2 356 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 ZNF134P52741 427 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 ESPL1Q14674 2120 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 KLHL30-AS1Q8NEE0 82 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 WDR90Q96KV7 1748 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 E9PQ18 207 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 LINC00173Q6ZV60 143 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 XCL2Q9UBD3 114 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 DOCK6Q96HP0 2047 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 CFPP27918 469 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 C1QTNF4Q9BXJ3 329 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 B5MCH6 92 aa9.63□□□□□ -0.87
UBR4-205ENST00000417040 FANCMQ8IYD8 2048 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 I3L3M4 83 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 HAMPP81172 84 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 FXYD5Q96DB9 178 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 DNAJC30Q96LL9 226 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 FAM223BA6NKX1 122 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 FAM223AQ8IWN6 122 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 MDS2Q8NDY4 140 aa9.62□□□□□ -0.87
UBR4-205ENST00000417040 OR11H6Q8NGC7 330 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms