RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 PPP1R1CQ8WVI7 109 aa12.59□□□□□ -0.39
LSM5-204ENST00000409909 SLC25A31Q9H0C2 315 aa12.59□□□□□ -0.39
LSM5-204ENST00000409909 PPP1R14DQ9NXH3 145 aa12.59□□□□□ -0.39
LSM5-204ENST00000409909 TEX48A0A1B0GUV7 120 aa12.58□□□□□ -0.4
LSM5-204ENST00000409909 CLINT1Q14677 625 aa12.58□□□□□ -0.4
LSM5-204ENST00000409909 KIR3DS1Q14943 382 aa12.58□□□□□ -0.4
LSM5-204ENST00000409909 OXA1LQ15070 435 aa12.58□□□□□ -0.4
LSM5-204ENST00000409909 GUK1Q16774 197 aa12.58□□□□□ -0.4
LSM5-204ENST00000409909 PARD6GQ9BYG4 376 aaPredicted RBP12.58□□□□□ -0.4
LSM5-204ENST00000409909 PLAC8L1A1L4L8 177 aa12.57□□□□□ -0.4
LSM5-204ENST00000409909 SSNA1O43805 119 aa12.57□□□□□ -0.4
LSM5-204ENST00000409909 LINC01587Q99440 93 aa12.57□□□□□ -0.4
LSM5-204ENST00000409909 NDUFAF3Q9BU61 184 aa12.57□□□□□ -0.4
LSM5-204ENST00000409909 TMEM14CQ9P0S9 112 aa12.57□□□□□ -0.4
LSM5-204ENST00000409909 TRBV19A0A075B6N1 114 aa12.56□□□□□ -0.4
LSM5-204ENST00000409909 NDUFB4O95168 129 aa12.56□□□□□ -0.4
LSM5-204ENST00000409909 TSPOP30536 169 aa12.56□□□□□ -0.4
LSM5-204ENST00000409909 CDKN1BP46527 198 aa12.56□□□□□ -0.4
LSM5-204ENST00000409909 OR10J6PQ8NGY7 276 aa12.56□□□□□ -0.4
LSM5-204ENST00000409909 ZNF253O75346 499 aa12.55□□□□□ -0.4
LSM5-204ENST00000409909 MPC2O95563 127 aa12.55□□□□□ -0.4
LSM5-204ENST00000409909 PYYP10082 97 aa12.55□□□□□ -0.4
LSM5-204ENST00000409909 DAD1P61803 113 aa12.55□□□□□ -0.4
LSM5-204ENST00000409909 TMEM256Q8N2U0 113 aa12.55□□□□□ -0.4
LSM5-204ENST00000409909 SLC25A2Q9BXI2 301 aa12.55□□□□□ -0.4
LSM5-204ENST00000409909 WDR61Q9GZS3 305 aaKnown RBP12.55□□□□□ -0.4
LSM5-204ENST00000409909 CT45A10P0DMU9 189 aa12.54□□□□□ -0.4
LSM5-204ENST00000409909 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
LSM5-204ENST00000409909 HTN3P15516 51 aa12.54□□□□□ -0.4
LSM5-204ENST00000409909 TAS2R60P59551 318 aa12.54□□□□□ -0.4
LSM5-204ENST00000409909 FCN2Q15485 313 aa12.54□□□□□ -0.4
LSM5-204ENST00000409909 MIR17HGQ75NE6 70 aa12.54□□□□□ -0.4
LSM5-204ENST00000409909 FAM167A-AS1Q96KT0 104 aa12.54□□□□□ -0.4
LSM5-204ENST00000409909 DNAH2Q9P225 4427 aa12.53□□□□□ -0.4
LSM5-204ENST00000409909 LYRM9A8MSI8 78 aa12.53□□□□□ -0.4
LSM5-204ENST00000409909 NPIPB6E9PJ23 425 aa12.53□□□□□ -0.4
LSM5-204ENST00000409909 M0R3E3 92 aa12.53□□□□□ -0.4
LSM5-204ENST00000409909 HTN1P15515 57 aa12.53□□□□□ -0.4
LSM5-204ENST00000409909 FAM210BQ96KR6 192 aa12.53□□□□□ -0.4
LSM5-204ENST00000409909 GFI1BQ5VTD9 330 aa12.52□□□□□ -0.41
LSM5-204ENST00000409909 BLNKQ8WV28 456 aa12.52□□□□□ -0.41
LSM5-204ENST00000409909 ATP5SQ99766 215 aa12.52□□□□□ -0.41
LSM5-204ENST00000409909 HSPB11Q9Y547 144 aa12.52□□□□□ -0.41
LSM5-204ENST00000409909 TIMM9Q9Y5J7 89 aa12.52□□□□□ -0.41
LSM5-204ENST00000409909 P0DMU3 169 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 FAM231AP0DMU4 169 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 FAM231CP0DMU5 169 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 DEFB130BP0DP73 79 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 DEFB130AP0DP74 79 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 RPL12P30050 165 aaKnown RBP12.51□□□□□ -0.41
LSM5-204ENST00000409909 ERCC8Q13216 396 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 PDE6HQ13956 83 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 EXOC3-AS1Q8N2X6 119 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 POM121L12Q8N7R1 296 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 MRPL53Q96EL3 112 aaKnown RBP12.51□□□□□ -0.41
LSM5-204ENST00000409909 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 ALG5Q9Y673 324 aa12.51□□□□□ -0.41
LSM5-204ENST00000409909 H7BYZ3 331 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 J3KRW8 73 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 PET100P0DJ07 73 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 TMEM88Q6PEY1 159 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
LSM5-204ENST00000409909 C16orf74Q96GX8 76 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 ODF3Q96PU9 254 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 SMIM3Q9BZL3 60 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 KCNIP2Q9NS61 270 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 HECTD4Q9Y4D8 3996 aa12.5□□□□□ -0.41
LSM5-204ENST00000409909 LEPP41159 167 aa12.49□□□□□ -0.41
LSM5-204ENST00000409909 FXYD5Q96DB9 178 aa12.49□□□□□ -0.41
LSM5-204ENST00000409909 OR51M1Q9H341 326 aa12.49□□□□□ -0.41
LSM5-204ENST00000409909 WFDC1Q9HC57 220 aa12.49□□□□□ -0.41
LSM5-204ENST00000409909 FUT9Q9Y231 359 aa12.49□□□□□ -0.41
LSM5-204ENST00000409909 PRELID1Q9Y255 219 aa12.49□□□□□ -0.41
LSM5-204ENST00000409909 TRAV12-3A0A0B4J271 114 aa12.48□□□□□ -0.41
LSM5-204ENST00000409909 C17orf112F2Z3M2 114 aa12.48□□□□□ -0.41
LSM5-204ENST00000409909 OR10J4P0C629 311 aa12.48□□□□□ -0.41
LSM5-204ENST00000409909 NBEAP1P0C6P0 100 aa12.48□□□□□ -0.41
LSM5-204ENST00000409909 ICAM4Q14773 271 aa12.48□□□□□ -0.41
LSM5-204ENST00000409909 ZNF493Q6ZR52 646 aa12.48□□□□□ -0.41
LSM5-204ENST00000409909 TMEM263Q8WUH6 116 aaKnown RBP12.48□□□□□ -0.41
LSM5-204ENST00000409909 FAM19A4Q96LR4 140 aa12.48□□□□□ -0.41
LSM5-204ENST00000409909 MRPL32Q9BYC8 188 aaKnown RBP12.48□□□□□ -0.41
LSM5-204ENST00000409909 AGPAT4-IT1Q9H0P7 198 aa12.48□□□□□ -0.41
LSM5-204ENST00000409909 NOP10Q9NPE3 64 aaKnown RBP12.48□□□□□ -0.41
LSM5-204ENST00000409909 TIMM8BQ9Y5J9 83 aaPredicted RBP12.48□□□□□ -0.41
LSM5-204ENST00000409909 DNAH17Q9UFH2 4485 aa12.48□□□□□ -0.41
LSM5-204ENST00000409909 FFAR4Q5NUL3 377 aa12.47□□□□□ -0.41
LSM5-204ENST00000409909 RNF141Q8WVD5 230 aa12.47□□□□□ -0.41
LSM5-204ENST00000409909 ZNF503Q96F45 646 aa12.47□□□□□ -0.41
LSM5-204ENST00000409909 PAXXQ9BUH6 204 aa12.47□□□□□ -0.41
LSM5-204ENST00000409909 FAT2Q9NYQ8 4349 aa12.47□□□□□ -0.41
LSM5-204ENST00000409909 CBY3A6NI87 242 aa12.46□□□□□ -0.41
LSM5-204ENST00000409909 PTTG1O95997 202 aa12.46□□□□□ -0.41
LSM5-204ENST00000409909 IFNA5P01569 189 aa12.46□□□□□ -0.41
LSM5-204ENST00000409909 FAM122CQ6P4D5 195 aa12.46□□□□□ -0.41
LSM5-204ENST00000409909 C9orf47Q6ZRZ4 202 aa12.46□□□□□ -0.41
LSM5-204ENST00000409909 SCGB1C1Q8TD33 95 aa12.46□□□□□ -0.41
LSM5-204ENST00000409909 LINC00477Q96M19 166 aa12.46□□□□□ -0.41
LSM5-204ENST00000409909 AAMDCQ9H7C9 122 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms