RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 MSRB1Q9NZV6 116 aa13.25□□□□□ -0.29
SYNC-202ENST00000409190 THYN1Q9P016 225 aa13.25□□□□□ -0.29
SYNC-202ENST00000409190 CHD8Q9HCK8 2581 aa13.25□□□□□ -0.29
SYNC-202ENST00000409190 GFRA4Q9GZZ7 299 aa13.25□□□□□ -0.29
SYNC-202ENST00000409190 CD3EP07766 207 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 FAM71F2Q6NXP2 309 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 SIGLEC8Q9NYZ4 499 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 CRXO43186 299 aaPredicted RBP13.24□□□□□ -0.29
SYNC-202ENST00000409190 ORM1P02763 201 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 RBPJQ06330 500 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 C12orf54Q6X4T0 127 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 TTTY13Q9BZ97 58 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 NPIPB6E9PJ23 425 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 GAS8-AS1O95177 125 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 EVI2AP22794 236 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 ZNF414Q96IQ9 312 aa13.24□□□□□ -0.29
SYNC-202ENST00000409190 SH2D1AO60880 128 aa13.23□□□□□ -0.29
SYNC-202ENST00000409190 RHOGP84095 191 aa13.23□□□□□ -0.29
SYNC-202ENST00000409190 C7orf71A4D174 169 aa13.23□□□□□ -0.29
SYNC-202ENST00000409190 CKS2P33552 79 aa13.23□□□□□ -0.29
SYNC-202ENST00000409190 SMIM12Q96EX1 92 aa13.23□□□□□ -0.29
SYNC-202ENST00000409190 CELSR1Q9NYQ6 3014 aa13.23□□□□□ -0.29
SYNC-202ENST00000409190 APOBEC3AP31941 199 aaPredicted RBP13.23□□□□□ -0.29
SYNC-202ENST00000409190 Q8NA96 180 aa13.23□□□□□ -0.29
SYNC-202ENST00000409190 PLP1P60201 277 aa13.22□□□□□ -0.29
SYNC-202ENST00000409190 VGLL1Q99990 258 aa13.22□□□□□ -0.29
SYNC-202ENST00000409190 C1RLQ9NZP8 487 aa13.22□□□□□ -0.29
SYNC-202ENST00000409190 H3BRN7 92 aa13.22□□□□□ -0.29
SYNC-202ENST00000409190 K7EMI3 77 aa13.22□□□□□ -0.29
SYNC-202ENST00000409190 DEFB125Q8N687 156 aa13.21□□□□□ -0.29
SYNC-202ENST00000409190 KAAG1Q9UBP8 84 aa13.21□□□□□ -0.29
SYNC-202ENST00000409190 NBR2O15453 112 aa13.21□□□□□ -0.29
SYNC-202ENST00000409190 ERCC8Q13216 396 aa13.21□□□□□ -0.29
SYNC-202ENST00000409190 ZNF672Q499Z4 452 aaPredicted RBP13.21□□□□□ -0.29
SYNC-202ENST00000409190 AP1S3Q96PC3 154 aa13.21□□□□□ -0.29
SYNC-202ENST00000409190 J3KRW8 73 aa13.21□□□□□ -0.3
SYNC-202ENST00000409190 ZNF207O43670 478 aaKnown RBP13.21□□□□□ -0.3
SYNC-202ENST00000409190 NPYP01303 97 aa13.21□□□□□ -0.3
SYNC-202ENST00000409190 NDPQ00604 133 aa13.21□□□□□ -0.3
SYNC-202ENST00000409190 LINC01545Q5VT33 79 aa13.21□□□□□ -0.3
SYNC-202ENST00000409190 CST9LQ9H4G1 147 aa13.21□□□□□ -0.3
SYNC-202ENST00000409190 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.21□□□□□ -0.3
SYNC-202ENST00000409190 TRAV30A0A087WSZ9 112 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 GATA1P15976 413 aaPredicted RBP13.2□□□□□ -0.3
SYNC-202ENST00000409190 ZNF80P51504 273 aaPredicted RBP13.2□□□□□ -0.3
SYNC-202ENST00000409190 HIST1H1AQ02539 215 aaPredicted RBP13.2□□□□□ -0.3
SYNC-202ENST00000409190 PCP2Q8IVA1 136 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 A0A096LNJ9 63 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 H3BUT2 72 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 EGR2P11161 476 aaPredicted RBP13.2□□□□□ -0.3
SYNC-202ENST00000409190 MRPL51Q4U2R6 128 aaKnown RBP13.2□□□□□ -0.3
SYNC-202ENST00000409190 C2orf91Q6ZV80 131 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 TMEM14CQ9P0S9 112 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 K7EP13 123 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 OVOL3O00110 214 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 RNF182Q8N6D2 247 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 C8orf31Q8N9H6 132 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 DKK2Q9UBU2 259 aa13.2□□□□□ -0.3
SYNC-202ENST00000409190 FAM231BA6NCW3 169 aa13.19□□□□□ -0.3
SYNC-202ENST00000409190 ORMDL3Q8N138 153 aa13.19□□□□□ -0.3
SYNC-202ENST00000409190 SPTBN4Q9H254 2564 aa13.19□□□□□ -0.3
SYNC-202ENST00000409190 HRNRQ86YZ3 2850 aaPredicted RBP13.19□□□□□ -0.3
SYNC-202ENST00000409190 TMEM97Q5BJF2 176 aa13.19□□□□□ -0.3
SYNC-202ENST00000409190 COX8AP10176 69 aa13.18□□□□□ -0.3
SYNC-202ENST00000409190 DPM3Q9P2X0 92 aa13.18□□□□□ -0.3
SYNC-202ENST00000409190 GAGE12BA1L429 117 aa13.18□□□□□ -0.3
SYNC-202ENST00000409190 B9A039 149 aa13.18□□□□□ -0.3
SYNC-202ENST00000409190 SAP30O75446 220 aa13.18□□□□□ -0.3
SYNC-202ENST00000409190 ECSCRQ19T08 205 aa13.18□□□□□ -0.3
SYNC-202ENST00000409190 GAGE10A6NGK3 116 aa13.17□□□□□ -0.3
SYNC-202ENST00000409190 SPRY2O43597 315 aa13.17□□□□□ -0.3
SYNC-202ENST00000409190 FAM104BQ5XKR9 115 aa13.17□□□□□ -0.3
SYNC-202ENST00000409190 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
SYNC-202ENST00000409190 C21orf62Q9NYP8 219 aa13.17□□□□□ -0.3
SYNC-202ENST00000409190 CREBBPQ92793 2442 aa13.17□□□□□ -0.3
SYNC-202ENST00000409190 MFAP4P55083 255 aa13.17□□□□□ -0.3
SYNC-202ENST00000409190 DYNAPQ8N1N2 210 aa13.17□□□□□ -0.3
SYNC-202ENST00000409190 OCIAD2Q56VL3 154 aa13.16□□□□□ -0.3
SYNC-202ENST00000409190 FER1L6-AS1Q8NA97 138 aa13.16□□□□□ -0.3
SYNC-202ENST00000409190 FANCD2OSQ96PS1 177 aa13.16□□□□□ -0.3
SYNC-202ENST00000409190 RIPPLY3P57055 190 aa13.16□□□□□ -0.3
SYNC-202ENST00000409190 FOXC1Q12948 553 aa13.16□□□□□ -0.3
SYNC-202ENST00000409190 PVRIGQ6DKI7 326 aa13.16□□□□□ -0.3
SYNC-202ENST00000409190 ZFHX3Q15911 3703 aa13.16□□□□□ -0.3
SYNC-202ENST00000409190 PRAC2D3DTV9 90 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 ARPC1AQ92747 370 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 TNFRSF14Q92956 283 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 FBLL1A6NHQ2 334 aaKnown RBP13.15□□□□□ -0.3
SYNC-202ENST00000409190 PRSS1P07477 247 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 IFI27L1Q96BM0 104 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 CD5LO43866 347 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 C5orf64Q2M2E5 130 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 DEFB104AQ8WTQ1 72 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 PRR25Q96S07 402 aa13.15□□□□□ -0.3
SYNC-202ENST00000409190 CDSNQ15517 529 aa13.14□□□□□ -0.31
SYNC-202ENST00000409190 PEF1Q9UBV8 284 aaKnown RBP13.14□□□□□ -0.31
SYNC-202ENST00000409190 HOXB4P17483 251 aaPredicted RBP13.14□□□□□ -0.31
SYNC-202ENST00000409190 Q6ZQT7 251 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms