RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 METTL15P1P0C7V9 234 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 IAPPP10997 89 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 NFYBP25208 207 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 G6PCP35575 357 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 HBG1P69891 147 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 HBG2P69892 147 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 SERF2P84101 59 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 TNFAIP6P98066 277 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 RUNX1Q01196 453 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 CD164Q04900 197 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 TNFRSF9Q07011 255 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM267Q0VDI3 215 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 EDDM3AQ14507 147 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 LRRC75BQ2VPJ9 315 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 SPRNQ5BIV9 151 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 SPANXN5Q5MJ07 72 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 AKR1C8PQ5T2L2 129 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM14EPQ6UXP3 125 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 DOLPP1Q86YN1 238 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF738Q8NE65 137 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 SFT2D1Q8WV19 159 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 MBD3L1Q8WWY6 194 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 YPEL2Q96QA6 119 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 OR2V2Q96R30 315 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 OR4C12Q96R67 309 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 PSMG3Q9BT73 122 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 TUBA4BQ9H853 241 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 SMCO4Q9NRQ5 59 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 JPT1Q9UK76 154 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF835Q9Y2P0 537 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 COL6A3P12111 3177 aa2.89□□□□□ -1.95
HMGB3P18-201ENST00000406327 PRRC2AP48634 2157 aaKnown RBP2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 A0A1B0GV50 99 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 C7orf77A4D0Y5 90 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 DPRXA6NFQ7 191 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 H3BP45 60 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 SRP19P09132 144 aaKnown RBP2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 OR13C7P0DN81 318 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 EDDM3BP56851 147 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 RAB2AP61019 212 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 FLI1Q01543 452 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 ATP5G2Q06055 141 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 SLC38A11Q08AI6 406 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM249Q2WGJ8 235 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 KHDC3LQ587J8 217 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 TEX36Q5VZQ5 186 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 MORN3Q6PF18 240 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 SSX8Q7RTT4 187 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 PDPNQ86YL7 162 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF561Q8N587 486 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 OR10P1Q8NGE3 313 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 CLDND2Q8NHS1 167 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 BLNKQ8WV28 456 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 GPR82Q96P67 336 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 CIB3Q96Q77 187 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 WDR61Q9GZS3 305 aaKnown RBP2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 LINC00574Q9H8X3 128 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 RPRMQ9NS64 109 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 TIMM9Q9Y5J7 89 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 EML6Q6ZMW3 1958 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZDBF2Q9HCK1 2354 aa2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 NCOA6Q14686 2063 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P18-201ENST00000406327 TNRC6AQ8NDV7 1962 aaKnown RBP2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 KIAA1549Q9HCM3 1950 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 USP34Q70CQ2 3546 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 LOC102724200A0A096LPH7 203 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 TRGV10A0A0A0MS01 117 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF729A6NN14 1252 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 CEBPZOSA8MTT3 80 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 H3BQ15 152 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 M0R036 132 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 MT-ND4LP03901 98 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 CRYBA1P05813 215 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 OR4A8P0C604 315 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 AKR1C3P42330 323 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 SPCS3P61009 180 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 RHEBQ15382 184 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 LTC4SQ16873 150 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 RPL39P5Q59GN2 51 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 FAM201AQ5SY85 155 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 RPP25LQ8N5L8 163 aaKnown RBP2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 ZNF439Q8NDP4 499 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 OR8A1Q8NGG7 326 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 DTD1Q8TEA8 209 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 HIST1H2BAQ96A08 127 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 GAFA1Q96PS6 74 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 CCL13Q99616 98 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 TMEM147Q9BVK8 224 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 VSIRQ9H7M9 311 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 SLC39A9Q9NUM3 307 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 IDI2-AS1Q9NZ38 188 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 PRELID3BQ9Y3B1 194 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 PUS1Q9Y606 427 aaKnown RBP eCLIP2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 URGCP-MRPS24S4R325 110 aa2.87□□□□□ -1.95
HMGB3P18-201ENST00000406327 VPS13AQ96RL7 3174 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 A0A087WWC5 75 aa2.86□□□□□ -1.95
HMGB3P18-201ENST00000406327 TRAV38-1A0A0B4J264 116 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms