RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 AQP10Q96PS8 301 aa4.48□□□□□ -1.69
RPA3-204ENST00000406109 RARRES2Q99969 163 aa4.48□□□□□ -1.69
RPA3-204ENST00000406109 RPRMQ9NS64 109 aa4.48□□□□□ -1.69
RPA3-204ENST00000406109 RFNGQ9Y644 331 aa4.48□□□□□ -1.69
RPA3-204ENST00000406109 HMCN2Q8NDA2 5059 aa4.48□□□□□ -1.69
RPA3-204ENST00000406109 TRAV8-2A0A0B4J237 113 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 F6UB75 175 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 H3BMM0 161 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 H3BQ15 152 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 MRPS12O15235 138 aaKnown RBP4.47□□□□□ -1.69
RPA3-204ENST00000406109 ZNF705DP0CH99 300 aaPredicted RBP4.47□□□□□ -1.69
RPA3-204ENST00000406109 ZNF705BP0CI00 300 aaPredicted RBP4.47□□□□□ -1.69
RPA3-204ENST00000406109 PRB4P10163 310 aaPredicted RBP4.47□□□□□ -1.69
RPA3-204ENST00000406109 HLA-DMBP28068 263 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 FXYD7P58549 80 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 GDF5OSQ5U4N7 250 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 SPATA31B1PQ5VZV4 182 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 MORN3Q6PF18 240 aaPredicted RBP4.47□□□□□ -1.69
RPA3-204ENST00000406109 FOXI2Q6ZQN5 318 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 MIR17HGQ75NE6 70 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 TRPT1Q86TN4 253 aaKnown RBP4.47□□□□□ -1.69
RPA3-204ENST00000406109 ZNF575Q86XF7 245 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 HSD17B11Q8NBQ5 300 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 ZNF738Q8NE65 137 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 OR11H2Q8NH07 326 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 MFFQ9GZY8 342 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 SAV1Q9H4B6 383 aaPredicted RBP4.47□□□□□ -1.69
RPA3-204ENST00000406109 KCNIP2Q9NS61 270 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 CLEC5AQ9NY25 188 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 TNFSF18Q9UNG2 199 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 TIMM9Q9Y5J7 89 aa4.47□□□□□ -1.69
RPA3-204ENST00000406109 FLG2Q5D862 2391 aaPredicted RBP4.47□□□□□ -1.69
RPA3-204ENST00000406109 NACAE9PAV3 2078 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 A0A087X0K7 114 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 BORCS7-ASMTA0A0B4J1R7 106 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 A0A0J9YX75 114 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 A0A1W2PPV4 95 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 ZNF705FA8MVS1 300 aaPredicted RBP4.46□□□□□ -1.7
RPA3-204ENST00000406109 ARPC5O15511 151 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 GIG44P09565 113 aaPredicted RBP4.46□□□□□ -1.7
RPA3-204ENST00000406109 IGLC2P0DOY2 106 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 PYYP10082 97 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 SPP1P10451 314 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 HLA-DRB4P13762 266 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 NUTF2P61970 127 aaKnown RBP4.46□□□□□ -1.7
RPA3-204ENST00000406109 RHOBP62745 196 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 PSG9Q00887 426 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 ZNF266Q14584 549 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 PSG3Q16557 428 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 GUK1Q16774 197 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 ACOT6Q3I5F7 207 aaPredicted RBP4.46□□□□□ -1.7
RPA3-204ENST00000406109 Q6ZNX1 250 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 Q8NAQ8 132 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 OR10G4Q8NGN3 311 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 OR10G9Q8NGN4 311 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 OR10G7Q8NGN6 311 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 BLNKQ8WV28 456 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 SLC25A2Q9BXI2 301 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 PARD6GQ9BYG4 376 aaPredicted RBP4.46□□□□□ -1.7
RPA3-204ENST00000406109 OR51M1Q9H341 326 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 HRH4Q9H3N8 390 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 ZNF331Q9NQX6 463 aaPredicted RBP4.46□□□□□ -1.7
RPA3-204ENST00000406109 PPP1R14DQ9NXH3 145 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 ZNF586Q9NXT0 402 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 TMEM14CQ9P0S9 112 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 XCL2Q9UBD3 114 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 FUT9Q9Y231 359 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 HLA-DRB4X5D2U9 266 aa4.46□□□□□ -1.7
RPA3-204ENST00000406109 hCG_2014768A0A024R1R8 64 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 IGHV4-4A0A075B6R2 117 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 RNF222A6NCQ9 220 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 G3V3Q6 166 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 M0R2N4 97 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 OR7C2O60412 319 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 EIF3GO75821 320 aaKnown RBP eCLIP4.45□□□□□ -1.7
RPA3-204ENST00000406109 DUSP14O95147 198 aaKnown RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 OR10J4P0C629 311 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 NBEAP1P0C6P0 100 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 RBMY1A1P0DJD3 496 aaKnown RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 RBMY1CP0DJD4 496 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 HIST1H1EP10412 219 aaKnown RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 CXCL2P19875 107 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 ATP6V0CP27449 155 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 RAB2AP61019 212 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 HIST1H1AQ02539 215 aaPredicted RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 RBMY1FQ15415 496 aaKnown RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 RPL7L1Q6DKI1 246 aaKnown RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 FAM122CQ6P4D5 195 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 LCN15Q6UWW0 184 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 POM121L12Q8N7R1 296 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 RNF141Q8WVD5 230 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 RPUSD4Q96CM3 377 aaKnown RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 SAT2Q96F10 170 aaPredicted RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 FAM167A-AS1Q96KT0 104 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 SLC50A1Q9BRV3 221 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 MRPL32Q9BYC8 188 aaKnown RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 SH3BGRL3Q9H299 93 aa4.45□□□□□ -1.7
RPA3-204ENST00000406109 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
RPA3-204ENST00000406109 TRBV19A0A075B6N1 114 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms