RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 UTF1Q5T230 341 aa2.23□□□□□ -2.05
CHD9-202ENST00000398510 MIC13Q5XKP0 118 aa2.23□□□□□ -2.05
CHD9-202ENST00000398510 LINC00114Q6XXX2 140 aa2.23□□□□□ -2.05
CHD9-202ENST00000398510 LYZL2Q7Z4W2 148 aa2.23□□□□□ -2.05
CHD9-202ENST00000398510 A0A1W2PRX2 142 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 DIAPH2-AS1Q14236 149 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 SHISA2Q6UWI4 295 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 LCNL1Q6ZST4 164 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 RFLNAQ6ZTI6 216 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 PIP4P1Q86T03 277 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 TMEM105Q8N8V8 129 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 SRXN1Q9BYN0 137 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 IL36BQ9NZH7 164 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 SPCS1Q9Y6A9 102 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 DOPEY1Q5JWR5 2465 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 PKD1L2Q7Z442 2459 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 C5orf42Q9H799 3197 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 LY6DQ14210 128 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 TRAV8-7A0A075B6U6 113 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 C12orf77C9JDV5 145 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 XAF1Q6GPH4 301 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 AGMATQ9BSE5 352 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 ANAPC10Q9UM13 185 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 BDP1A6H8Y1 2624 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 K7ERS5 55 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 TFPI2P48307 235 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 HILS1P60008 231 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 DAZAP2Q15038 168 aaPredicted RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 SUMO4Q6EEV6 95 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 PIP4P2Q8N4L2 257 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 C5orf30Q96GV9 206 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 A0A1B0GW64 132 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 FXYD1O00168 92 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 CELA2BP08218 269 aaPredicted RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 APELAP0DMC3 54 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 HSD52Q0P140 79 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 ZNF524Q96C55 264 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 ODF3Q96PU9 254 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 KLHDC3Q9BQ90 382 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 WISP3O95389 354 aaPredicted RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 SPINK9Q5DT21 86 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 LYPD6Q86Y78 171 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 NRG4Q8WWG1 115 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 ZC2HC1AQ96GY0 325 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 F11RQ9Y624 299 aaKnown RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 TRIOO75962 3097 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 PRRC2CQ9Y520 2896 aaKnown RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 IGHV1-24A0A0C4DH33 117 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 DPRXA6NFQ7 191 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 MMP23AO75900 390 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 SPART-AS1P0CW21 52 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 FBXL19-AS1Q494R0 122 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 TMEM263Q8WUH6 116 aaKnown RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 SPAG8Q99932 426 aaPredicted RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 TMEM243Q9BU79 118 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 LYRM9A8MSI8 78 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 J3QRE1 110 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 NPSP0C0P6 89 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 LINC00614P0C842 121 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 LTBRP36941 435 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 ZNF833PQ6ZTB9 187 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 TMEM179BQ7Z7N9 219 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 C17orf82Q86X59 251 aaPredicted RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 SPTBN5Q9NRC6 3674 aaKnown RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 CGB1A6NKQ9 187 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 SOCS3O14543 225 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 P2RY4P51582 365 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 CDCP2Q5VXM1 449 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 PRSS45Q7RTY3 260 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 SPTSSBQ8NFR3 76 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 PGLYRP4Q96LB8 373 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 B9D2Q9BPU9 175 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 RBM38Q9H0Z9 239 aaKnown RBP2.22□□□□□ -2.05
CHD9-202ENST00000398510 LIME1Q9H400 295 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 SIGLEC8Q9NYZ4 499 aa2.22□□□□□ -2.05
CHD9-202ENST00000398510 ANKRD11Q6UB99 2663 aaPredicted RBP2.21□□□□□ -2.05
CHD9-202ENST00000398510 FOXF2Q12947 444 aa2.21□□□□□ -2.05
CHD9-202ENST00000398510 IGKV1D-16P01601 117 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 IGHV2-5P01817 119 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 FAM27E3Q08E93 113 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 COQ2Q96H96 371 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 H7C2G1 150 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 PAX4O43316 350 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 IGHG4P01861 327 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 CGB2Q6NT52 195 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 B5MCH6 92 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 CRYBA4P53673 196 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 TIRAPP58753 221 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 PRR31Q5SQ13 230 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 TMEM200BQ69YZ2 307 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 C1QL2Q7Z5L3 287 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 GGNQ86UU5 652 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 BATF2Q8N1L9 274 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 IFI27L1Q96BM0 104 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 H0YL77 283 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 K7EQD1 137 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 CCL24O00175 119 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 IGHV1-46P01743 117 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 FAAP20Q6NZ36 180 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 SLC25A29Q8N8R3 303 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms