RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 SH3BGRL3Q9H299 93 aa18.43■□□□□ 0.54
TSPAN4-207ENST00000397411 A8MTW9 85 aa18.42■□□□□ 0.54
TSPAN4-207ENST00000397411 PRAC2D3DTV9 90 aa18.42■□□□□ 0.54
TSPAN4-207ENST00000397411 DEFB4AO15263 64 aa18.42■□□□□ 0.54
TSPAN4-207ENST00000397411 EIF3GO75821 320 aaKnown RBP eCLIP18.42■□□□□ 0.54
TSPAN4-207ENST00000397411 SPINK13Q1W4C9 94 aa18.42■□□□□ 0.54
TSPAN4-207ENST00000397411 AMTNQ6UX39 209 aa18.42■□□□□ 0.54
TSPAN4-207ENST00000397411 EXOC3-AS1Q8N2X6 119 aa18.42■□□□□ 0.54
TSPAN4-207ENST00000397411 MRPL53Q96EL3 112 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-207ENST00000397411 HMSDA8MTL9 139 aa18.41■□□□□ 0.54
TSPAN4-207ENST00000397411 ZNF705EA8MWA4 302 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-207ENST00000397411 M0R2Z0 102 aa18.41■□□□□ 0.54
TSPAN4-207ENST00000397411 CDC34P49427 236 aaPredicted RBP18.41■□□□□ 0.54
TSPAN4-207ENST00000397411 ICAM4Q14773 271 aa18.41■□□□□ 0.54
TSPAN4-207ENST00000397411 ARPC5LQ9BPX5 153 aa18.41■□□□□ 0.54
TSPAN4-207ENST00000397411 TMEM208Q9BTX3 173 aa18.41■□□□□ 0.54
TSPAN4-207ENST00000397411 BOLA2-SMG1P6H3BVE0 249 aa18.4■□□□□ 0.54
TSPAN4-207ENST00000397411 HMGB3O15347 200 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-207ENST00000397411 RANP62826 216 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-207ENST00000397411 PQLC2Q6ZP29 291 aa18.4■□□□□ 0.54
TSPAN4-207ENST00000397411 IGF2BP2-AS1Q96M15 143 aa18.4■□□□□ 0.54
TSPAN4-207ENST00000397411 X6R8D5 127 aa18.4■□□□□ 0.54
TSPAN4-207ENST00000397411 IGHV4-28A0A0C4DH34 117 aa18.39■□□□□ 0.53
TSPAN4-207ENST00000397411 A0A0D9SG52 128 aa18.39■□□□□ 0.53
TSPAN4-207ENST00000397411 M0R3E3 92 aa18.39■□□□□ 0.53
TSPAN4-207ENST00000397411 CASC10Q5T4H9 136 aa18.39■□□□□ 0.53
TSPAN4-207ENST00000397411 KCNRGQ8N5I3 272 aa18.39■□□□□ 0.53
TSPAN4-207ENST00000397411 OR11H4Q8NGC9 324 aa18.39■□□□□ 0.53
TSPAN4-207ENST00000397411 ACTR3CQ9C0K3 210 aaPredicted RBP18.39■□□□□ 0.53
TSPAN4-207ENST00000397411 C11orf68Q9H3H3 251 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-207ENST00000397411 hCG_2014768A0A024R1R8 64 aa18.38■□□□□ 0.53
TSPAN4-207ENST00000397411 INSP01308 110 aa18.38■□□□□ 0.53
TSPAN4-207ENST00000397411 TSPOP30536 169 aa18.38■□□□□ 0.53
TSPAN4-207ENST00000397411 CSN1S1P47710 185 aa18.38■□□□□ 0.53
TSPAN4-207ENST00000397411 ZNF345Q14585 488 aa18.38■□□□□ 0.53
TSPAN4-207ENST00000397411 ZNF503Q96F45 646 aa18.38■□□□□ 0.53
TSPAN4-207ENST00000397411 KANTRA0A1W2PQU2 76 aa18.37■□□□□ 0.53
TSPAN4-207ENST00000397411 CXorf65A6NEN9 183 aa18.37■□□□□ 0.53
TSPAN4-207ENST00000397411 LYPD1Q8N2G4 141 aa18.37■□□□□ 0.53
TSPAN4-207ENST00000397411 RPP25LQ8N5L8 163 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-207ENST00000397411 Q8NAQ8 132 aa18.37■□□□□ 0.53
TSPAN4-207ENST00000397411 C11orf45Q8TAV5 145 aa18.37■□□□□ 0.53
TSPAN4-207ENST00000397411 RAB24Q969Q5 203 aa18.37■□□□□ 0.53
TSPAN4-207ENST00000397411 PHYHIPLQ96FC7 376 aa18.37■□□□□ 0.53
TSPAN4-207ENST00000397411 SMIM9A6NGZ8 99 aa18.36■□□□□ 0.53
TSPAN4-207ENST00000397411 PMS2P11Q13670 270 aa18.36■□□□□ 0.53
TSPAN4-207ENST00000397411 AKR1C8PQ5T2L2 129 aa18.36■□□□□ 0.53
TSPAN4-207ENST00000397411 ZNF705AQ6ZN79 300 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-207ENST00000397411 ST6GAL2Q96JF0 529 aa18.36■□□□□ 0.53
TSPAN4-207ENST00000397411 CYTL1Q9NRR1 136 aa18.36■□□□□ 0.53
TSPAN4-207ENST00000397411 TRAV12-2A0A075B6T6 113 aa18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 PFDN1O60925 122 aa18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 HBE1P02100 147 aa18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 RBMY1A1P0DJD3 496 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 RBMY1CP0DJD4 496 aa18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 CDKN1BP46527 198 aa18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 RBMY1FQ15415 496 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 BAP18Q8IXM2 172 aa18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 C1orf158Q8N1D5 194 aa18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 NEU1Q99519 415 aa18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 Q9H3A6 140 aa18.35■□□□□ 0.53
TSPAN4-207ENST00000397411 NPIPB6E9PJ23 425 aa18.34■□□□□ 0.53
TSPAN4-207ENST00000397411 LEPP41159 167 aa18.34■□□□□ 0.53
TSPAN4-207ENST00000397411 ERCC8Q13216 396 aa18.34■□□□□ 0.53
TSPAN4-207ENST00000397411 FAM74A1Q5RGS3 127 aa18.34■□□□□ 0.53
TSPAN4-207ENST00000397411 ARL14EPLP0DKL9 152 aa18.33■□□□□ 0.52
TSPAN4-207ENST00000397411 HYLS1Q96M11 299 aa18.33■□□□□ 0.52
TSPAN4-207ENST00000397411 LINC00477Q96M19 166 aa18.33■□□□□ 0.52
TSPAN4-207ENST00000397411 ZNF471Q9BX82 626 aaPredicted RBP18.33■□□□□ 0.52
TSPAN4-207ENST00000397411 PGPA6NDG6 321 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 CRXO43186 299 aaPredicted RBP18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 STAG3L2P0CL84 134 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 STAG3L3P0CL85 134 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 CT45A10P0DMU9 189 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 EMP1P54849 157 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 RRN3P1Q2M238 152 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 TMEM78Q5T7P6 136 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 IQCF2Q8IXL9 164 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 TCTE3Q8IZS6 198 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 CMTM2Q8TAZ6 248 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 RXFP4Q8TDU9 374 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 LINC01587Q99440 93 aa18.32■□□□□ 0.52
TSPAN4-207ENST00000397411 J3KRW8 73 aa18.31■□□□□ 0.52
TSPAN4-207ENST00000397411 BCL2L11O43521 198 aa18.31■□□□□ 0.52
TSPAN4-207ENST00000397411 CXorf1O96002 111 aa18.31■□□□□ 0.52
TSPAN4-207ENST00000397411 NANOS2P60321 138 aaKnown RBP18.31■□□□□ 0.52
TSPAN4-207ENST00000397411 EIF5AP63241 154 aaKnown RBP18.31■□□□□ 0.52
TSPAN4-207ENST00000397411 TMUB2Q71RG4 321 aa18.31■□□□□ 0.52
TSPAN4-207ENST00000397411 AKAP14Q86UN6 197 aa18.31■□□□□ 0.52
TSPAN4-207ENST00000397411 AGPAT4-IT1Q9H0P7 198 aa18.31■□□□□ 0.52
TSPAN4-207ENST00000397411 OTORQ9NRC9 128 aa18.31■□□□□ 0.52
TSPAN4-207ENST00000397411 IGKV2-40A0A087WW87 121 aaPredicted RBP18.3■□□□□ 0.52
TSPAN4-207ENST00000397411 TMEM189A5PLL7 270 aa18.3■□□□□ 0.52
TSPAN4-207ENST00000397411 IGKV2D-40P01614 121 aaPredicted RBP18.3■□□□□ 0.52
TSPAN4-207ENST00000397411 ODF3Q96PU9 254 aa18.3■□□□□ 0.52
TSPAN4-207ENST00000397411 GCHFRP30047 84 aa18.29■□□□□ 0.52
TSPAN4-207ENST00000397411 TMEM256Q8N2U0 113 aa18.29■□□□□ 0.52
TSPAN4-207ENST00000397411 RPH3ALQ9UNE2 315 aa18.29■□□□□ 0.52
TSPAN4-207ENST00000397411 CTXND1A0A1B0GTU2 59 aa18.28■□□□□ 0.52
TSPAN4-207ENST00000397411 LOC102723971A0A1B0GUV8 181 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms