RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SRSF1Q07955 248 aaKnown RBP eCLIP11.97□□□□□ -0.49
VLDLR-202ENST00000382099 MRPL51Q4U2R6 128 aaKnown RBP11.97□□□□□ -0.49
VLDLR-202ENST00000382099 TMEM14BQ9NUH8 114 aa11.97□□□□□ -0.49
VLDLR-202ENST00000382099 MRPL35Q9NZE8 188 aaKnown RBP11.97□□□□□ -0.49
VLDLR-202ENST00000382099 HLA-DRB4X5D2U9 266 aa11.97□□□□□ -0.49
VLDLR-202ENST00000382099 EXOC3-AS1Q8N2X6 119 aa11.96□□□□□ -0.49
VLDLR-202ENST00000382099 PROCRQ9UNN8 238 aa11.96□□□□□ -0.49
VLDLR-202ENST00000382099 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.49
VLDLR-202ENST00000382099 CCL4P13236 92 aa11.96□□□□□ -0.49
VLDLR-202ENST00000382099 LYZL1Q6UWQ5 148 aa11.96□□□□□ -0.49
VLDLR-202ENST00000382099 Q86TA4 180 aa11.96□□□□□ -0.49
VLDLR-202ENST00000382099 PLXDC1Q8IUK5 500 aa11.96□□□□□ -0.49
VLDLR-202ENST00000382099 IGHV3-21A0A0B4J1V1 117 aa11.96□□□□□ -0.5
VLDLR-202ENST00000382099 LOC107984640A0A0U1RRK4 108 aa11.96□□□□□ -0.5
VLDLR-202ENST00000382099 TAL2Q16559 108 aa11.96□□□□□ -0.5
VLDLR-202ENST00000382099 CALYQ9NYX4 217 aa11.96□□□□□ -0.5
VLDLR-202ENST00000382099 FAM104BQ5XKR9 115 aa11.95□□□□□ -0.5
VLDLR-202ENST00000382099 AAMDCQ9H7C9 122 aa11.95□□□□□ -0.5
VLDLR-202ENST00000382099 PCNX2A6NKB5 2137 aa11.95□□□□□ -0.5
VLDLR-202ENST00000382099 ZGRF1Q86YA3 2104 aa11.95□□□□□ -0.5
VLDLR-202ENST00000382099 ZNF134P52741 427 aa11.95□□□□□ -0.5
VLDLR-202ENST00000382099 LYRM7Q5U5X0 104 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 TMEM158Q8WZ71 300 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 PLXNB1O43157 2135 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 TCL1BO95988 128 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 NXPH1P58417 271 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 TMEM155Q4W5P6 130 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 C15orf53Q8NAA6 179 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 PCNX1Q96RV3 2341 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 MYMXA0A1B0GTQ4 84 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
VLDLR-202ENST00000382099 ZFHX2Q9C0A1 2572 aaPredicted RBP11.94□□□□□ -0.5
VLDLR-202ENST00000382099 IGLV3-12A0A075B6K2 115 aa11.93□□□□□ -0.5
VLDLR-202ENST00000382099 RNASE2P10153 161 aaKnown RBP11.93□□□□□ -0.5
VLDLR-202ENST00000382099 ERHP84090 104 aaKnown RBP11.93□□□□□ -0.5
VLDLR-202ENST00000382099 PRCDQ00LT1 54 aa11.93□□□□□ -0.5
VLDLR-202ENST00000382099 ZNF714Q96N38 554 aa11.93□□□□□ -0.5
VLDLR-202ENST00000382099 ONECUT1Q9UBC0 465 aa11.93□□□□□ -0.5
VLDLR-202ENST00000382099 C9JAW5 83 aa11.93□□□□□ -0.5
VLDLR-202ENST00000382099 PSMG4Q5JS54 123 aa11.93□□□□□ -0.5
VLDLR-202ENST00000382099 TUSC5Q8IXB3 177 aa11.93□□□□□ -0.5
VLDLR-202ENST00000382099 CADP27708 2225 aa11.93□□□□□ -0.5
VLDLR-202ENST00000382099 LINC00694P0DN24 101 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 NAV3Q8IVL0 2385 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 B9A039 149 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 H7C2G1 150 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 CEACAM4O75871 244 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 DKK1O94907 266 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 MYCNOSP40205 109 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 EMP1P54849 157 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 UTF1Q5T230 341 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 C1orf229Q6ZS94 237 aaPredicted RBP11.92□□□□□ -0.5
VLDLR-202ENST00000382099 SPTA1P02549 2419 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 KIR2DS2P43631 304 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 RAXQ9Y2V3 346 aa11.92□□□□□ -0.5
VLDLR-202ENST00000382099 TRBV7-3A0A075B6L6 115 aa11.91□□□□□ -0.5
VLDLR-202ENST00000382099 C2orf83Q53S99 150 aa11.91□□□□□ -0.5
VLDLR-202ENST00000382099 THBDP07204 575 aa11.91□□□□□ -0.5
VLDLR-202ENST00000382099 MAFAQ8NHW3 353 aaPredicted RBP11.91□□□□□ -0.5
VLDLR-202ENST00000382099 PCSK5Q92824 1860 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 RFPL3SP0C7P2 107 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 Q6ZS92 163 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 GGNQ86UU5 652 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 MYOZ3Q8TDC0 251 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 C12orf49Q9H741 205 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 MED13Q9UHV7 2174 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 ADGRG4Q8IZF6 3080 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 APELAP0DMC3 54 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 OR10J6PQ8NGY7 276 aa11.9□□□□□ -0.5
VLDLR-202ENST00000382099 SLC25A20O43772 301 aa11.9□□□□□ -0.51
VLDLR-202ENST00000382099 ATP5LO75964 103 aa11.9□□□□□ -0.51
VLDLR-202ENST00000382099 IGF2-ASQ6U949 168 aa11.9□□□□□ -0.51
VLDLR-202ENST00000382099 OR11H6Q8NGC7 330 aa11.9□□□□□ -0.51
VLDLR-202ENST00000382099 NTN5Q8WTR8 489 aaPredicted RBP11.9□□□□□ -0.51
VLDLR-202ENST00000382099 NRGNQ92686 78 aa11.9□□□□□ -0.51
VLDLR-202ENST00000382099 SAA2P0DJI9 122 aaPredicted RBP11.89□□□□□ -0.51
VLDLR-202ENST00000382099 PIFOQ8TCI5 191 aa11.89□□□□□ -0.51
VLDLR-202ENST00000382099 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
VLDLR-202ENST00000382099 IGKV1-16P04430 117 aa11.89□□□□□ -0.51
VLDLR-202ENST00000382099 PEAR1Q5VY43 1037 aaPredicted RBP11.89□□□□□ -0.51
VLDLR-202ENST00000382099 VKORC1Q9BQB6 163 aa11.89□□□□□ -0.51
VLDLR-202ENST00000382099 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
VLDLR-202ENST00000382099 KLK15Q9H2R5 256 aa11.89□□□□□ -0.51
VLDLR-202ENST00000382099 SMIM9A6NGZ8 99 aa11.88□□□□□ -0.51
VLDLR-202ENST00000382099 C15orf65H3BRN8 121 aa11.88□□□□□ -0.51
VLDLR-202ENST00000382099 UPK2O00526 184 aa11.88□□□□□ -0.51
VLDLR-202ENST00000382099 HES1Q14469 280 aa11.88□□□□□ -0.51
VLDLR-202ENST00000382099 TMEM133Q9H2Q1 129 aa11.88□□□□□ -0.51
VLDLR-202ENST00000382099 MRPL36Q9P0J6 103 aaKnown RBP11.88□□□□□ -0.51
VLDLR-202ENST00000382099 GAS8-AS1O95177 125 aa11.88□□□□□ -0.51
VLDLR-202ENST00000382099 C10orf55Q5SWW7 151 aa11.88□□□□□ -0.51
VLDLR-202ENST00000382099 RPL7P18124 248 aaKnown RBP11.88□□□□□ -0.51
VLDLR-202ENST00000382099 ASIPP42127 132 aa11.88□□□□□ -0.51
VLDLR-202ENST00000382099 C21orf62Q9NYP8 219 aa11.88□□□□□ -0.51
VLDLR-202ENST00000382099 CEP192Q8TEP8 1941 aa11.87□□□□□ -0.51
VLDLR-202ENST00000382099 SHISA9B4DS77 424 aa11.87□□□□□ -0.51
VLDLR-202ENST00000382099 DNPH1O43598 174 aa11.87□□□□□ -0.51
VLDLR-202ENST00000382099 GATA1P15976 413 aaPredicted RBP11.87□□□□□ -0.51
VLDLR-202ENST00000382099 LYZP61626 148 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms