RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 C11orf68Q9H3H3 251 aaKnown RBP12.92□□□□□ -0.34
COL2A1-202ENST00000380518 MSRB2Q9Y3D2 182 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 SIP14410 1827 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 ATP6V0E1O15342 81 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 ZNF833PQ6ZTB9 187 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 TIMM21Q9BVV7 248 aa12.92□□□□□ -0.34
COL2A1-202ENST00000380518 E9PQ18 207 aa12.91□□□□□ -0.34
COL2A1-202ENST00000380518 GATA3P23771 443 aa12.91□□□□□ -0.34
COL2A1-202ENST00000380518 RSPO3Q9BXY4 272 aaPredicted RBP12.91□□□□□ -0.34
COL2A1-202ENST00000380518 SBF1O95248 1867 aa12.91□□□□□ -0.34
COL2A1-202ENST00000380518 CD5LO43866 347 aa12.91□□□□□ -0.34
COL2A1-202ENST00000380518 C18orf32Q8TCD1 76 aa12.91□□□□□ -0.34
COL2A1-202ENST00000380518 TRBV19A0A075B6N1 114 aa12.91□□□□□ -0.34
COL2A1-202ENST00000380518 MSMBP08118 114 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
COL2A1-202ENST00000380518 CHAC1Q9BUX1 264 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 TRAV13-1A0A0B4J241 112 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 IGKV1-39P01597 117 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 IGKV1D-39P04432 117 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 DEFB131AP59861 70 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 WISP1O95388 367 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 LGALS1P09382 135 aaKnown RBP12.9□□□□□ -0.34
COL2A1-202ENST00000380518 UBE2V1Q13404 147 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 IGFL3Q6UXB1 125 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 IL17RELQ6ZVW7 336 aa12.9□□□□□ -0.34
COL2A1-202ENST00000380518 TRPT1Q86TN4 253 aaKnown RBP12.9□□□□□ -0.34
COL2A1-202ENST00000380518 ESDP10768 282 aa12.9□□□□□ -0.35
COL2A1-202ENST00000380518 C2orf82Q6UX34 121 aa12.9□□□□□ -0.35
COL2A1-202ENST00000380518 WDR86Q86TI4 376 aa12.9□□□□□ -0.35
COL2A1-202ENST00000380518 PRIMA1Q86XR5 153 aa12.9□□□□□ -0.35
COL2A1-202ENST00000380518 PRSS46E5RG02 174 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 K7ENP7 123 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 ATRXP46100 2492 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 TMEM213A2RRL7 107 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 C17orf58Q2M2W7 97 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 FAM104BQ5XKR9 115 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 LINC00311Q8N616 119 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 PLXNA3P51805 1871 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 LY6G6EA0A0G2JKS1 128 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 LOXP28300 417 aaPredicted RBP12.89□□□□□ -0.35
COL2A1-202ENST00000380518 U3KQA8 63 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 RHODO00212 210 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 SHANK1Q9Y566 2161 aa12.89□□□□□ -0.35
COL2A1-202ENST00000380518 CEACAM8P31997 349 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-202ENST00000380518 CFHR2P36980 270 aa12.88□□□□□ -0.35
COL2A1-202ENST00000380518 SPXQ9BT56 116 aa12.88□□□□□ -0.35
COL2A1-202ENST00000380518 CYYR1Q96J86 154 aa12.88□□□□□ -0.35
COL2A1-202ENST00000380518 MED13LQ71F56 2210 aa12.88□□□□□ -0.35
COL2A1-202ENST00000380518 LEPROTO15243 131 aa12.88□□□□□ -0.35
COL2A1-202ENST00000380518 PRR30Q53SZ7 412 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-202ENST00000380518 OVOL2Q9BRP0 275 aa12.88□□□□□ -0.35
COL2A1-202ENST00000380518 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-202ENST00000380518 FAM231DQ6ZW35 169 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 STPG4Q8N801 248 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 ZNF524Q96C55 264 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 RUSC1-AS1Q66K80 236 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 RNF114Q9Y508 228 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 THSD7BQ9C0I4 1608 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 IGHV1-69DA0A0B4J2H0 117 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 IGHV1-69P01742 117 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 ZNF726P1Q15940 193 aa12.87□□□□□ -0.35
COL2A1-202ENST00000380518 SPAG8Q99932 426 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-202ENST00000380518 LAMTOR3Q9UHA4 124 aa12.86□□□□□ -0.35
COL2A1-202ENST00000380518 DKK1O94907 266 aa12.86□□□□□ -0.35
COL2A1-202ENST00000380518 TEX36Q5VZQ5 186 aa12.86□□□□□ -0.35
COL2A1-202ENST00000380518 PTPRDP23468 1912 aa12.86□□□□□ -0.35
COL2A1-202ENST00000380518 IGLV1-44P01699 117 aa12.86□□□□□ -0.35
COL2A1-202ENST00000380518 C2orf66Q6UXQ4 117 aa12.86□□□□□ -0.35
COL2A1-202ENST00000380518 POLR3KQ9Y2Y1 108 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-202ENST00000380518 ZNF503-AS2A6NEH8 195 aa12.86□□□□□ -0.35
COL2A1-202ENST00000380518 A8MWP6 167 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 C15orf65H3BRN8 121 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 WT1-ASQ06250 92 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 G3V318 75 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 SS18Q15532 418 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 Q5PR19 223 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 DUX4L9Q6RFH8 374 aaPredicted RBP12.85□□□□□ -0.35
COL2A1-202ENST00000380518 NEGR1Q7Z3B1 354 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 C8orf49Q96NF6 230 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 TP53TG1Q9Y2A0 90 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 IGLV3-9A0A075B6K5 115 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 DEFB130BP0DP73 79 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 DEFB130AP0DP74 79 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 Q8N8P6 123 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 TMEM14CQ9P0S9 112 aa12.85□□□□□ -0.35
COL2A1-202ENST00000380518 IGHV2-70DA0A0C4DH43 119 aa12.84□□□□□ -0.35
COL2A1-202ENST00000380518 PRR25Q96S07 402 aa12.84□□□□□ -0.35
COL2A1-202ENST00000380518 ZSWIM8A7E2V4 1837 aa12.84□□□□□ -0.35
COL2A1-202ENST00000380518 OCIAD2Q56VL3 154 aa12.84□□□□□ -0.35
COL2A1-202ENST00000380518 GAGE12BA1L429 117 aa12.84□□□□□ -0.35
COL2A1-202ENST00000380518 UBE2DNLQ8IWF7 75 aa12.84□□□□□ -0.35
COL2A1-202ENST00000380518 V9GYV3 84 aa12.84□□□□□ -0.35
COL2A1-202ENST00000380518 RLFQ13129 1914 aa12.84□□□□□ -0.35
COL2A1-202ENST00000380518 RNF223E7ERA6 249 aa12.83□□□□□ -0.36
COL2A1-202ENST00000380518 YLPM1P49750 1951 aaKnown RBP12.83□□□□□ -0.36
COL2A1-202ENST00000380518 SPINK13Q1W4C9 94 aa12.83□□□□□ -0.36
COL2A1-202ENST00000380518 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms