RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 TMEM37Q8WXS4 190 aa16.1■□□□□ 0.17
C9orf47-202ENST00000375850 GSKIPQ9P0R6 139 aa16.1■□□□□ 0.17
C9orf47-202ENST00000375850 MRPS16Q9Y3D3 137 aaKnown RBP16.1■□□□□ 0.17
C9orf47-202ENST00000375850 GAGE12BA1L429 117 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 C7orf66A4D0T2 115 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 GAGE7O76087 117 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 GAGE12FP0CL80 117 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 GAGE12GP0CL81 117 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 GAGE12IP0CL82 117 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 OPCMLQ14982 345 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 Q8N1X5 172 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 SAT2Q96F10 170 aaPredicted RBP16.09■□□□□ 0.17
C9orf47-202ENST00000375850 MGST2Q99735 147 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 DNAJC4Q9NNZ3 241 aa16.09■□□□□ 0.17
C9orf47-202ENST00000375850 NPIPB6E9PJ23 425 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 L7N2F9 121 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 SLC17A3O00476 420 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 ZNF253O75346 499 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 CAMLGP49069 296 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 VAMP2P63027 116 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 ARL16Q0P5N6 197 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 KIR3DS1Q14943 382 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 OR1L4Q8NGR5 311 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 MRPL53Q96EL3 112 aaKnown RBP16.08■□□□□ 0.16
C9orf47-202ENST00000375850 C18orf15Q96N68 181 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 PFDN5Q99471 154 aa16.08■□□□□ 0.16
C9orf47-202ENST00000375850 A0A0J9YY99 117 aa16.07■□□□□ 0.16
C9orf47-202ENST00000375850 PRAC2D3DTV9 90 aa16.07■□□□□ 0.16
C9orf47-202ENST00000375850 MBPP02686 304 aaPredicted RBP16.07■□□□□ 0.16
C9orf47-202ENST00000375850 HOXA5P20719 270 aa16.07■□□□□ 0.16
C9orf47-202ENST00000375850 ZNF846Q147U1 533 aa16.07■□□□□ 0.16
C9orf47-202ENST00000375850 BAK1Q16611 211 aa16.07■□□□□ 0.16
C9orf47-202ENST00000375850 ESRGQ1W209 222 aa16.07■□□□□ 0.16
C9orf47-202ENST00000375850 ZNF680Q8NEM1 530 aa16.07■□□□□ 0.16
C9orf47-202ENST00000375850 LRP1BQ9NZR2 4599 aa16.06■□□□□ 0.16
C9orf47-202ENST00000375850 SLC25A5P05141 298 aaKnown RBP16.06■□□□□ 0.16
C9orf47-202ENST00000375850 SNRPCP09234 159 aaKnown RBP16.06■□□□□ 0.16
C9orf47-202ENST00000375850 C12orf45Q8N5I9 185 aaPredicted RBP16.06■□□□□ 0.16
C9orf47-202ENST00000375850 ZNF431Q8TF32 576 aaPredicted RBP16.06■□□□□ 0.16
C9orf47-202ENST00000375850 PARD6GQ9BYG4 376 aaPredicted RBP16.06■□□□□ 0.16
C9orf47-202ENST00000375850 KRTAP1-5Q9BYS1 174 aa16.06■□□□□ 0.16
C9orf47-202ENST00000375850 TRAV12-3A0A0B4J271 114 aa16.05■□□□□ 0.16
C9orf47-202ENST00000375850 H3BQ15 152 aa16.05■□□□□ 0.16
C9orf47-202ENST00000375850 CT45A10P0DMU9 189 aa16.05■□□□□ 0.16
C9orf47-202ENST00000375850 PRB4P10163 310 aaPredicted RBP16.05■□□□□ 0.16
C9orf47-202ENST00000375850 H3BTX0 84 aa16.04■□□□□ 0.16
C9orf47-202ENST00000375850 MORN5Q5VZ52 161 aa16.04■□□□□ 0.16
C9orf47-202ENST00000375850 NRARPQ7Z6K4 114 aa16.04■□□□□ 0.16
C9orf47-202ENST00000375850 LINC00467Q9BRT7 94 aa16.04■□□□□ 0.16
C9orf47-202ENST00000375850 BTCP35070 178 aa16.03■□□□□ 0.16
C9orf47-202ENST00000375850 C20orf85Q9H1P6 137 aa16.03■□□□□ 0.16
C9orf47-202ENST00000375850 TMPRSS5Q9H3S3 457 aa16.03■□□□□ 0.16
C9orf47-202ENST00000375850 UQCC1Q9NVA1 299 aa16.03■□□□□ 0.16
C9orf47-202ENST00000375850 PRELID1Q9Y255 219 aa16.03■□□□□ 0.16
C9orf47-202ENST00000375850 TRGV2A0A075B6R0 118 aa16.02■□□□□ 0.16
C9orf47-202ENST00000375850 J3KRW8 73 aa16.02■□□□□ 0.16
C9orf47-202ENST00000375850 PVALBP20472 110 aaPredicted RBP16.02■□□□□ 0.16
C9orf47-202ENST00000375850 BCAP31P51572 246 aa16.02■□□□□ 0.16
C9orf47-202ENST00000375850 CAV2P51636 162 aa16.02■□□□□ 0.16
C9orf47-202ENST00000375850 Q6ZTI0 123 aa16.02■□□□□ 0.16
C9orf47-202ENST00000375850 WDR83OSQ9Y284 106 aa16.02■□□□□ 0.16
C9orf47-202ENST00000375850 LINC00854A0A1B0GVQ3 168 aa16.01■□□□□ 0.15
C9orf47-202ENST00000375850 C7orf71A4D174 169 aa16.01■□□□□ 0.15
C9orf47-202ENST00000375850 RPL29P47914 159 aaKnown RBP16.01■□□□□ 0.15
C9orf47-202ENST00000375850 PDE6HQ13956 83 aa16.01■□□□□ 0.15
C9orf47-202ENST00000375850 ANXA2RQ3ZCQ2 193 aa16.01■□□□□ 0.15
C9orf47-202ENST00000375850 MIC13Q5XKP0 118 aa16.01■□□□□ 0.15
C9orf47-202ENST00000375850 CHAC2Q8WUX2 184 aa16.01■□□□□ 0.15
C9orf47-202ENST00000375850 LINC00477Q96M19 166 aa16.01■□□□□ 0.15
C9orf47-202ENST00000375850 RBM38Q9H0Z9 239 aaKnown RBP16.01■□□□□ 0.15
C9orf47-202ENST00000375850 SCRT2Q9NQ03 307 aa16.01■□□□□ 0.15
C9orf47-202ENST00000375850 ZNF586Q9NXT0 402 aa16.01■□□□□ 0.15
C9orf47-202ENST00000375850 A0A096LPF7 62 aa16■□□□□ 0.15
C9orf47-202ENST00000375850 VWC2Q2TAL6 325 aa16■□□□□ 0.15
C9orf47-202ENST00000375850 TMEM14CQ9P0S9 112 aa16■□□□□ 0.15
C9orf47-202ENST00000375850 TRBV19A0A075B6N1 114 aa15.99■□□□□ 0.15
C9orf47-202ENST00000375850 KLLNB2CW77 178 aa15.99■□□□□ 0.15
C9orf47-202ENST00000375850 NMBP08949 121 aa15.99■□□□□ 0.15
C9orf47-202ENST00000375850 S100A11P31949 105 aa15.99■□□□□ 0.15
C9orf47-202ENST00000375850 EIF4E3Q8N5X7 224 aaKnown RBP15.99■□□□□ 0.15
C9orf47-202ENST00000375850 VSIG2Q96IQ7 327 aa15.99■□□□□ 0.15
C9orf47-202ENST00000375850 SLC39A9Q9NUM3 307 aa15.99■□□□□ 0.15
C9orf47-202ENST00000375850 LSM5Q9Y4Y9 91 aaKnown RBP15.99■□□□□ 0.15
C9orf47-202ENST00000375850 TRAV5A0A0B4J249 113 aa15.98■□□□□ 0.15
C9orf47-202ENST00000375850 CST7O76096 145 aa15.98■□□□□ 0.15
C9orf47-202ENST00000375850 HIST1H1EP10412 219 aaKnown RBP15.98■□□□□ 0.15
C9orf47-202ENST00000375850 KRTAP10-2P60368 255 aa15.98■□□□□ 0.15
C9orf47-202ENST00000375850 C11orf72Q8NBR9 251 aa15.98■□□□□ 0.15
C9orf47-202ENST00000375850 SDHCQ99643 169 aaPredicted RBP15.98■□□□□ 0.15
C9orf47-202ENST00000375850 GSN-AS1Q9NRJ2 163 aa15.98■□□□□ 0.15
C9orf47-202ENST00000375850 FUT9Q9Y231 359 aa15.98■□□□□ 0.15
C9orf47-202ENST00000375850 SIVA1O15304 175 aa15.97■□□□□ 0.15
C9orf47-202ENST00000375850 IL7P13232 177 aa15.97■□□□□ 0.15
C9orf47-202ENST00000375850 SULT1A1P50225 295 aa15.97■□□□□ 0.15
C9orf47-202ENST00000375850 HBG1P69891 147 aa15.97■□□□□ 0.15
C9orf47-202ENST00000375850 HBG2P69892 147 aa15.97■□□□□ 0.15
C9orf47-202ENST00000375850 SLAQ13239 276 aa15.97■□□□□ 0.15
C9orf47-202ENST00000375850 IBA57Q5T440 356 aaKnown RBP15.97■□□□□ 0.15
C9orf47-202ENST00000375850 FAM19A4Q96LR4 140 aa15.97■□□□□ 0.15
C9orf47-202ENST00000375850 TIMM9Q9Y5J7 89 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms