RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SMIM15Q7Z3B0 74 aa1□□□□□ -2.25
RNU6-28P-201ENST00000362378 RMND5BQ96G75 393 aaPredicted RBP1□□□□□ -2.25
RNU6-28P-201ENST00000362378 ZC2HC1AQ96GY0 325 aa1□□□□□ -2.25
RNU6-28P-201ENST00000362378 C5orf67F2Z3F1 127 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 H3BRM9 83 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 FAM107AO95990 144 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 S100A11P31949 105 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 HAGHLQ6PII5 290 aaPredicted RBP0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 GKN2Q86XP6 184 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 PLPP5Q8NEB5 264 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 CCL4L1Q8NHW4 92 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 THEM6Q8WUY1 208 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 DIRC1Q969H9 104 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 TCEAL2Q9H3H9 227 aaPredicted RBP0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 TAF9BQ9HBM6 251 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 MGAMO43451 1857 aa0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 COL1A1P02452 1464 aaPredicted RBP0.99□□□□□ -2.25
RNU6-28P-201ENST00000362378 PEAK1Q9H792 1746 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 E9PCH4 1651 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 ALPK3Q96L96 1907 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 IGLV3-32A0A0A0MS00 114 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 C9orf170A2RU37 121 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 FABP2P12104 132 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 POLR2HP52434 150 aaKnown RBP0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 CIRBPQ14011 172 aaKnown RBP0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 PSMF1Q92530 271 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 AMELYQ99218 206 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 EFCAB11Q9BUY7 163 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 MED31Q9Y3C7 131 aa0.98□□□□□ -2.25
RNU6-28P-201ENST00000362378 ROS1P08922 2347 aa0.97□□□□□ -2.25
RNU6-28P-201ENST00000362378 KLF7O75840 302 aaPredicted RBP0.97□□□□□ -2.25
RNU6-28P-201ENST00000362378 MT-ND6P03923 174 aa0.97□□□□□ -2.25
RNU6-28P-201ENST00000362378 SDC2P34741 201 aa0.97□□□□□ -2.25
RNU6-28P-201ENST00000362378 MRPS36P82909 103 aaKnown RBP0.97□□□□□ -2.25
RNU6-28P-201ENST00000362378 OR4B1Q8NGF8 309 aa0.97□□□□□ -2.25
RNU6-28P-201ENST00000362378 TMEM138Q9NPI0 162 aa0.97□□□□□ -2.25
RNU6-28P-201ENST00000362378 TNFSF18Q9UNG2 199 aa0.97□□□□□ -2.25
RNU6-28P-201ENST00000362378 TENM1Q9UKZ4 2725 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 PRORSD1PA6NEY8 169 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 H0YJX3 145 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 FABP4P15090 132 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 NDUFA6P56556 154 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 TMEM128Q5BJH2 165 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 HRCT1Q6UXD1 115 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 FOXI2Q6ZQN5 318 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 LINC00269Q8N2A0 174 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 OR9Q1Q8NGQ5 310 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 OR4C12Q96R67 309 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 NDUFAF1Q9Y375 327 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 TPRKBQ9Y3C4 175 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 TCOF1Q13428 1488 aaKnown RBP0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 ANKRD31Q8N7Z5 1873 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 NCOA6Q14686 2063 aaPredicted RBP0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 BCL9O00512 1426 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 SIP14410 1827 aa0.96□□□□□ -2.26
RNU6-28P-201ENST00000362378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.95□□□□□ -2.26
RNU6-28P-201ENST00000362378 TRBV7-6A0A0J9YX20 115 aa0.95□□□□□ -2.26
RNU6-28P-201ENST00000362378 RPL7P18124 248 aaKnown RBP0.95□□□□□ -2.26
RNU6-28P-201ENST00000362378 SAMD13Q5VXD3 122 aa0.95□□□□□ -2.26
RNU6-28P-201ENST00000362378 OR5H6Q8NGV6 325 aa0.95□□□□□ -2.26
RNU6-28P-201ENST00000362378 GRPEL2Q8TAA5 225 aa0.95□□□□□ -2.26
RNU6-28P-201ENST00000362378 CST11Q9H112 138 aa0.95□□□□□ -2.26
RNU6-28P-201ENST00000362378 HSPB8Q9UJY1 196 aa0.95□□□□□ -2.26
RNU6-28P-201ENST00000362378 FREM3P0C091 2139 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 PHRF1Q9P1Y6 1649 aaKnown RBP0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 TRBV27A0A0K0K1C4 114 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 GNG14A0A1W2PPG7 69 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 JMJD7-PLA2G4BH0Y9G9 81 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 NCR3O14931 201 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 IGHV3-33P01772 117 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 MIR22HGQ0VDD5 57 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 LINC00305Q7Z4B0 112 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 PRELID3AQ96N28 172 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 CCDC115Q96NT0 180 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 LXNQ9BS40 222 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 ERBINQ96RT1 1412 aa0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 NUP210Q8TEM1 1887 aaPredicted RBP0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 HEATR1Q9H583 2144 aaKnown RBP0.94□□□□□ -2.26
RNU6-28P-201ENST00000362378 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 TSTD3H0UI37 97 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 PPYP01298 95 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 NBEAP1P0C6P0 100 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 RPS3P23396 243 aaKnown RBP eCLIP0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 S100GP29377 79 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 EFNA4P52798 201 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 MAXP61244 160 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 DIAPH2-AS1Q14236 149 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 VMA21Q3ZAQ7 101 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 SKA2Q8WVK7 121 aaPredicted RBP0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 NIT2Q9NQR4 276 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 TRAPPC2LQ9UL33 140 aa0.93□□□□□ -2.26
RNU6-28P-201ENST00000362378 CASP8AP2Q9UKL3 1982 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 PTPRFP10586 1907 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 A0A096LPI6 279 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 TRAV13-1A0A0B4J241 112 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 LOC107984640A0A0U1RRK4 108 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 TRACP01848 142 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 SRP9P49458 86 aaKnown RBP0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 DR1Q01658 176 aa0.92□□□□□ -2.26
RNU6-28P-201ENST00000362378 ZCCHC23Q6ZST2 131 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms