RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PMP2P02689 132 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 C8GP07360 202 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 FABP2P12104 132 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 KCNE1P15382 129 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 DDTP30046 118 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CRYBA4P53673 196 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 MAXP61244 160 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR8G1Q15617 311 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 MSMO1Q15800 293 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 IAH1Q2TAA2 248 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM244Q5VVB8 128 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 RPL22L1Q6P5R6 122 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TAC4Q86UU9 113 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 RNF175Q8N4F7 328 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SMIM20Q8N5G0 67 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TSLPQ969D9 159 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 STARD4Q96DR4 205 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SMIM7Q9BQ49 75 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SLC25A21Q9BQT8 299 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TMEM191AQ9H0A3 160 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 HES4Q9HCC6 221 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 UQCC1Q9NVA1 299 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TP73-AS1Q9UF72 201 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 LINC00588Q9Y4M8 146 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 COL1A2P08123 1366 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TRPM6Q9BX84 2022 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 C7orf66A4D0T2 115 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR4C46A6NHA9 309 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 A8MT66 165 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 A8MUN3 132 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 IGLL5B9A064 214 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SOD1P00441 154 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CRYBA1P05813 215 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SFTA3P0C7M3 94 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CXCL8P10145 99 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF32P17041 273 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 HIST1H1TP22492 207 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 S100A4P26447 101 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 GABRA4P48169 554 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 RBM11P57052 281 aaKnown RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 ELOBQ15370 118 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 ZNF880Q6PDB4 577 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 DPPA3Q6W0C5 159 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 TMPPEQ6ZT21 453 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 C6orf201Q7Z4U5 140 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 BPIFA4PQ86YQ2 179 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 LRRC25Q8N386 305 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 C10orf126Q8N4M7 172 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 DAND5Q8N907 189 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 OR13C8Q8NGS7 320 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 CMTM2Q8TAZ6 248 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 GNPNAT1Q96EK6 184 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 PSMG3Q9BT73 122 aaPredicted RBP0.97□□□□□ -2.25
BRCA1-202ENST00000354071 PCBD2Q9H0N5 130 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 NAT8BQ9UHF3 227 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 HSPB8Q9UJY1 196 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 SCN10AQ9Y5Y9 1956 aa0.97□□□□□ -2.25
BRCA1-202ENST00000354071 DNAH17Q9UFH2 4485 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 IGHV3-21A0A0B4J1V1 117 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 IGKV1D-43A0A0B4J1Z2 117 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 A0A1W2PQ67 120 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 IGSF23A1L1A6 192 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 C5orf49A4QMS7 147 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 CRYM-AS1A6NIL9 109 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 FAM159BA6NKW6 160 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR5K4A6NMS3 321 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 LECT2O14960 151 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 IGHV1-46P01743 117 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DNAH10OSP0CZ25 163 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 HINT1P49773 126 aaPredicted RBP0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DNAJB13P59910 316 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 UBE2G1P62253 170 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 FAM74A1Q5RGS3 127 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 GLYATL3Q5SZD4 288 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DHRS4L2Q6PKH6 230 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 LCN15Q6UWW0 184 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 NIT1Q86X76 327 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 GPHB5Q86YW7 130 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 MSRB3Q8IXL7 192 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 DEFB125Q8N687 156 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 SPANXA2-OT1Q8N9U9 137 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR10P1Q8NGE3 313 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR8D4Q8NGM9 314 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR4K13Q8NH42 304 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR13C6PQ8NH95 151 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 PPTC7Q8NI37 304 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 OR4C12Q96R67 309 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 GPX7Q96SL4 187 aaPredicted RBP0.96□□□□□ -2.26
BRCA1-202ENST00000354071 NMNAT3Q96T66 252 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 GINS3Q9BRX5 216 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 ZNF2Q9BSG1 426 aaPredicted RBP0.96□□□□□ -2.26
BRCA1-202ENST00000354071 LPAR5Q9H1C0 372 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 MED29Q9NX70 200 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 KLK12Q9UKR0 248 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 MYO18AQ92614 2054 aaKnown RBP0.96□□□□□ -2.26
BRCA1-202ENST00000354071 CACNA1HO95180 2353 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 NUMA1Q14980 2115 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 TRAV36DV7A0A075B6V5 113 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 LEUTXA8MZ59 168 aa0.96□□□□□ -2.26
BRCA1-202ENST00000354071 CCL22O00626 93 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms