RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 IFITM2Q01629 132 aa11.69□□□□□ -0.54
PDPK1-202ENST00000342085 ARFGEF1Q9Y6D6 1849 aa11.69□□□□□ -0.54
PDPK1-202ENST00000342085 C8orf86Q6ZUL3 223 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 KIF13BQ9NQT8 1826 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 HLA-DRB4P13762 266 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 C9orf153Q5TBE3 101 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 HLA-DRB4X5D2U9 266 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 CDKN1BP46527 198 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 RBM38Q9H0Z9 239 aaKnown RBP11.68□□□□□ -0.54
PDPK1-202ENST00000342085 DEFB112Q30KQ8 113 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 CRYGCP07315 174 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 IGHV4-28A0A0C4DH34 117 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 IL17DQ8TAD2 202 aa11.68□□□□□ -0.54
PDPK1-202ENST00000342085 TREML4Q6UXN2 200 aa11.67□□□□□ -0.54
PDPK1-202ENST00000342085 TP53TG1Q9Y2A0 90 aa11.67□□□□□ -0.54
PDPK1-202ENST00000342085 GAGE2BQ13066 116 aa11.67□□□□□ -0.54
PDPK1-202ENST00000342085 ZNRD1Q9P1U0 126 aa11.67□□□□□ -0.54
PDPK1-202ENST00000342085 ICOSQ9Y6W8 199 aa11.67□□□□□ -0.54
PDPK1-202ENST00000342085 RPRMLQ8N4K4 120 aa11.67□□□□□ -0.54
PDPK1-202ENST00000342085 IGHV1-24A0A0C4DH33 117 aa11.67□□□□□ -0.54
PDPK1-202ENST00000342085 SPART-AS1P0CW21 52 aa11.67□□□□□ -0.54
PDPK1-202ENST00000342085 NAA38Q9BRA0 125 aaKnown RBP11.67□□□□□ -0.54
PDPK1-202ENST00000342085 IGHV4-59P01825 116 aa11.66□□□□□ -0.54
PDPK1-202ENST00000342085 TMEM170AQ8WVE7 144 aa11.66□□□□□ -0.54
PDPK1-202ENST00000342085 ZFP36P26651 326 aaKnown RBP11.66□□□□□ -0.54
PDPK1-202ENST00000342085 RNF138Q8WVD3 245 aa11.66□□□□□ -0.54
PDPK1-202ENST00000342085 PFN1P07737 140 aaKnown RBP11.66□□□□□ -0.54
PDPK1-202ENST00000342085 BAALCQ8WXS3 180 aa11.66□□□□□ -0.54
PDPK1-202ENST00000342085 NDUFB8O95169 186 aa11.66□□□□□ -0.54
PDPK1-202ENST00000342085 TMEM14BQ9NUH8 114 aa11.66□□□□□ -0.54
PDPK1-202ENST00000342085 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
PDPK1-202ENST00000342085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.65□□□□□ -0.543e-7■■□□□ 13.5
PDPK1-202ENST00000342085 PRB2P02812 416 aaPredicted RBP11.65□□□□□ -0.54
PDPK1-202ENST00000342085 C5orf47Q569G3 176 aa11.65□□□□□ -0.54
PDPK1-202ENST00000342085 VPREB3Q9UKI3 123 aa11.65□□□□□ -0.54
PDPK1-202ENST00000342085 CAMK2N2Q96S95 79 aa11.65□□□□□ -0.54
PDPK1-202ENST00000342085 IGFBP3P17936 291 aaPredicted RBP11.65□□□□□ -0.54
PDPK1-202ENST00000342085 UBL5Q9BZL1 73 aa11.65□□□□□ -0.54
PDPK1-202ENST00000342085 IGLV3-32A0A0A0MS00 114 aa11.65□□□□□ -0.54
PDPK1-202ENST00000342085 RHOHQ15669 191 aa11.65□□□□□ -0.54
PDPK1-202ENST00000342085 IGKV1D-17A0A075B6S4 117 aa11.65□□□□□ -0.55
PDPK1-202ENST00000342085 EGR2P11161 476 aaPredicted RBP11.65□□□□□ -0.55
PDPK1-202ENST00000342085 BCL6BQ8N143 479 aaPredicted RBP11.64□□□□□ -0.55
PDPK1-202ENST00000342085 HSD52Q0P140 79 aa11.64□□□□□ -0.55
PDPK1-202ENST00000342085 IGLV10-54A0A075B6I4 117 aa11.64□□□□□ -0.55
PDPK1-202ENST00000342085 WISP3O95389 354 aaPredicted RBP11.64□□□□□ -0.55
PDPK1-202ENST00000342085 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
PDPK1-202ENST00000342085 ZFAND6Q6FIF0 208 aa11.64□□□□□ -0.55
PDPK1-202ENST00000342085 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
PDPK1-202ENST00000342085 GNB1LQ9BYB4 327 aa11.64□□□□□ -0.55
PDPK1-202ENST00000342085 MRPL27Q9P0M9 148 aaKnown RBP11.64□□□□□ -0.55
PDPK1-202ENST00000342085 RNASE2P10153 161 aaKnown RBP11.64□□□□□ -0.55
PDPK1-202ENST00000342085 IGKV1-9A0A0C4DH69 117 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 Q5BKY6 102 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 FAM120AOSQ5T036 256 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 LINC00205P59089 165 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 DLEC1Q9Y238 1755 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 IGHG4P01861 327 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.63□□□□□ -0.55
PDPK1-202ENST00000342085 PRSS33Q8NF86 280 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 TM2D2Q9BX73 214 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 LINC01559Q495D7 138 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 APRG1Q8IVJ8 170 aa11.63□□□□□ -0.55
PDPK1-202ENST00000342085 NDUFB1O75438 58 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 ELANEP08246 267 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 NBL1P41271 181 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 GTSF1Q8WW33 167 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 C9JAW5 83 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 SMAD5-AS1Q9Y6J3 95 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 WNK2Q9Y3S1 2297 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 VSIRQ9H7M9 311 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 LAMTOR2Q9Y2Q5 125 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 NDUFA4O00483 81 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 NRGNQ92686 78 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 WDR83OSQ9Y284 106 aa11.62□□□□□ -0.55
PDPK1-202ENST00000342085 KIF26BQ2KJY2 2108 aa11.61□□□□□ -0.55
PDPK1-202ENST00000342085 MLANAQ16655 118 aa11.61□□□□□ -0.55
PDPK1-202ENST00000342085 USF3Q68DE3 2245 aa11.61□□□□□ -0.55
PDPK1-202ENST00000342085 A0A1B0GW64 132 aa11.61□□□□□ -0.55
PDPK1-202ENST00000342085 GYPEP15421 78 aa11.61□□□□□ -0.55
PDPK1-202ENST00000342085 MRPL23Q16540 153 aaKnown RBP11.61□□□□□ -0.55
PDPK1-202ENST00000342085 LYPD1Q8N2G4 141 aa11.61□□□□□ -0.55
PDPK1-202ENST00000342085 U3KQE9 123 aa11.61□□□□□ -0.55
PDPK1-202ENST00000342085 TUBGCP6Q96RT7 1819 aa11.61□□□□□ -0.55
PDPK1-202ENST00000342085 TINCRA0A1B0GVN0 87 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 SLURP1P55000 103 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 GUSBP1Q15486 140 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 RSPO3Q9BXY4 272 aaPredicted RBP11.6□□□□□ -0.55
PDPK1-202ENST00000342085 hDV102S1A0JD36 115 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 IGKV1-16P04430 117 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 SPINK8P0C7L1 97 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
PDPK1-202ENST00000342085 TRPM7Q96QT4 1865 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 DEFB4AO15263 64 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 LOC285556D6RIA3 1793 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 KIAA2026Q5HYC2 2103 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 IGKV1-12A0A0C4DH73 117 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 SIGMAR1Q99720 223 aa11.6□□□□□ -0.55
PDPK1-202ENST00000342085 SRSF8Q9BRL6 282 aaKnown RBP11.6□□□□□ -0.55
PDPK1-202ENST00000342085 GREB1LQ9C091 1923 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms