RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 IGHV1-3A0A0C4DH29 117 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 PLGLAQ15195 96 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 LINC00305Q7Z4B0 112 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 GTSF1Q8WW33 167 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 ARPC1AQ92747 370 aa11.01□□□□□ -0.65
SF1-202ENST00000334944 CD300EQ496F6 205 aaPredicted RBP11□□□□□ -0.65
SF1-202ENST00000334944 VPS13CQ709C8 3753 aa11□□□□□ -0.65
SF1-202ENST00000334944 LOC389332A0A1B0GUA5 103 aa11□□□□□ -0.65
SF1-202ENST00000334944 RPL27AP46776 148 aaKnown RBP11□□□□□ -0.65
SF1-202ENST00000334944 LOXL1Q08397 574 aaPredicted RBP11□□□□□ -0.65
SF1-202ENST00000334944 LINC01545Q5VT33 79 aa11□□□□□ -0.65
SF1-202ENST00000334944 LINC00311Q8N616 119 aa11□□□□□ -0.65
SF1-202ENST00000334944 CACNG8Q8WXS5 425 aa11□□□□□ -0.65
SF1-202ENST00000334944 RPEQ96AT9 228 aa11□□□□□ -0.65
SF1-202ENST00000334944 PAXXQ9BUH6 204 aa11□□□□□ -0.65
SF1-202ENST00000334944 A0A1B0GXF2 115 aa11□□□□□ -0.65
SF1-202ENST00000334944 A1L4Q6 167 aa11□□□□□ -0.65
SF1-202ENST00000334944 FNDC10F2Z333 226 aa11□□□□□ -0.65
SF1-202ENST00000334944 BUB1B-PAK6H3BSN5 160 aa11□□□□□ -0.65
SF1-202ENST00000334944 APOHP02749 345 aaPredicted RBP11□□□□□ -0.65
SF1-202ENST00000334944 AMTNQ6UX39 209 aa11□□□□□ -0.65
SF1-202ENST00000334944 GEMIN7Q9H840 131 aaKnown RBP11□□□□□ -0.65
SF1-202ENST00000334944 TCRBV4S1A1TA0A5B7 111 aa10.99□□□□□ -0.65
SF1-202ENST00000334944 A8MWL6 223 aa10.99□□□□□ -0.65
SF1-202ENST00000334944 IGLV1-47P01700 117 aa10.99□□□□□ -0.65
SF1-202ENST00000334944 SUB1P53999 127 aaKnown RBP eCLIP10.99□□□□□ -0.65
SF1-202ENST00000334944 HSPB8Q9UJY1 196 aa10.99□□□□□ -0.65
SF1-202ENST00000334944 SIGLEC9Q9Y336 463 aa10.99□□□□□ -0.65
SF1-202ENST00000334944 PPIFP30405 207 aaKnown RBP10.99□□□□□ -0.65
SF1-202ENST00000334944 ADORA2A-AS1P86434 159 aa10.99□□□□□ -0.65
SF1-202ENST00000334944 PIP4P2Q8N4L2 257 aa10.99□□□□□ -0.65
SF1-202ENST00000334944 OR5A1Q8NGJ0 315 aa10.99□□□□□ -0.65
SF1-202ENST00000334944 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
SF1-202ENST00000334944 FXYD2P54710 66 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 KLF17Q5JT82 389 aaPredicted RBP10.98□□□□□ -0.65
SF1-202ENST00000334944 PEX7O00628 323 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 TIMM23O14925 209 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 NDUFS7O75251 213 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 SPAG8Q99932 426 aaPredicted RBP10.98□□□□□ -0.65
SF1-202ENST00000334944 CACNG7P62955 275 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 LY6DQ14210 128 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 RASL11AQ6T310 242 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 PPP1R27Q86WC6 154 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 ZNF747Q9BV97 191 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 TPPP3Q9BW30 176 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 SS18L2Q9UHA2 77 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 MSRB2Q9Y3D2 182 aa10.98□□□□□ -0.65
SF1-202ENST00000334944 CNIH1O95406 144 aa10.97□□□□□ -0.65
SF1-202ENST00000334944 SMIM17P0DL12 118 aa10.97□□□□□ -0.65
SF1-202ENST00000334944 ZNF48Q96MX3 618 aaPredicted RBP10.97□□□□□ -0.65
SF1-202ENST00000334944 H3BMG7 143 aa10.96□□□□□ -0.65
SF1-202ENST00000334944 FXYD5Q96DB9 178 aa10.96□□□□□ -0.65
SF1-202ENST00000334944 SRSF8Q9BRL6 282 aaKnown RBP10.96□□□□□ -0.65
SF1-202ENST00000334944 HES1Q14469 280 aa10.96□□□□□ -0.66
SF1-202ENST00000334944 LCNL1Q6ZST4 164 aa10.96□□□□□ -0.66
SF1-202ENST00000334944 SRSF12Q8WXF0 261 aaKnown RBP10.96□□□□□ -0.66
SF1-202ENST00000334944 AP5S1Q9NUS5 200 aa10.96□□□□□ -0.66
SF1-202ENST00000334944 SMAD7O15105 426 aaKnown RBP10.95□□□□□ -0.66
SF1-202ENST00000334944 RBP4P02753 201 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 LYZP61626 148 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 ZNF329Q86UD4 541 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 PRSS3P2Q8NHM4 247 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 FSTL3O95633 263 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 SLC25A5P05141 298 aaKnown RBP10.95□□□□□ -0.66
SF1-202ENST00000334944 C20orf78Q9BR46 151 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 MRPL32Q9BYC8 188 aaKnown RBP10.95□□□□□ -0.66
SF1-202ENST00000334944 SPANXB1Q9NS25 103 aaPredicted RBP10.95□□□□□ -0.66
SF1-202ENST00000334944 TRAV8-1A0A0A6YYK1 113 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 PGPA6NDG6 321 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 TEX22C9J3V5 150 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 SCGB1A1P11684 91 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 ATP5IP56385 69 aaPredicted RBP10.95□□□□□ -0.66
SF1-202ENST00000334944 BCL6BQ8N143 479 aaPredicted RBP10.95□□□□□ -0.66
SF1-202ENST00000334944 C8orf31Q8N9H6 132 aa10.95□□□□□ -0.66
SF1-202ENST00000334944 NHP2Q9NX24 153 aaKnown RBP10.95□□□□□ -0.66
SF1-202ENST00000334944 LTAP01374 205 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 SMIM13P0DJ93 91 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 CFAP161Q6P656 301 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 VGLL1Q99990 258 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 PKD1L2Q7Z442 2459 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 A0A1W2PPR1 153 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 P01737 135 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 FA2HQ7L5A8 372 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 OR1L4Q8NGR5 311 aa10.94□□□□□ -0.66
SF1-202ENST00000334944 RPP21Q9H633 154 aaKnown RBP10.94□□□□□ -0.66
SF1-202ENST00000334944 CRYGBP07316 175 aa10.93□□□□□ -0.66
SF1-202ENST00000334944 IFI27P40305 119 aaPredicted RBP10.93□□□□□ -0.66
SF1-202ENST00000334944 FAM162BQ5T6X4 162 aa10.93□□□□□ -0.66
SF1-202ENST00000334944 FAM231DQ6ZW35 169 aa10.93□□□□□ -0.66
SF1-202ENST00000334944 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
SF1-202ENST00000334944 C7orf69Q9H7B7 122 aa10.93□□□□□ -0.66
SF1-202ENST00000334944 SERTM2A0A1B0GWG4 89 aa10.93□□□□□ -0.66
SF1-202ENST00000334944 INS-IGF2F8WCM5 200 aa10.93□□□□□ -0.66
SF1-202ENST00000334944 KLRB1Q12918 225 aa10.93□□□□□ -0.66
SF1-202ENST00000334944 CRYBG3Q68DQ2 2970 aa10.93□□□□□ -0.66
SF1-202ENST00000334944 PIEZO1Q92508 2521 aa10.92□□□□□ -0.66
SF1-202ENST00000334944 IGHV3-23P01764 117 aa10.92□□□□□ -0.66
SF1-202ENST00000334944 ATP5L2Q7Z4Y8 100 aa10.92□□□□□ -0.66
SF1-202ENST00000334944 CIARTQ8N365 385 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms