RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 C1RLQ9NZP8 487 aa15.58■□□□□ 0.09
CRLF3-201ENST00000324238 NPIPB5A8MRT5 1133 aa15.58■□□□□ 0.08
CRLF3-201ENST00000324238 PPIFP30405 207 aaKnown RBP15.58■□□□□ 0.08
CRLF3-201ENST00000324238 TMEM14CQ9P0S9 112 aa15.58■□□□□ 0.08
CRLF3-201ENST00000324238 IGHV2-70DA0A0C4DH43 119 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 GAS8-AS1O95177 125 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 ANKRD39Q53RE8 183 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 HSPB8Q9UJY1 196 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 FAM162BQ5T6X4 162 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 MSRB1Q9NZV6 116 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 IGHV3-66A0A0C4DH42 116 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 NDPQ00604 133 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 PRSS57Q6UWY2 283 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 SIGLEC8Q9NYZ4 499 aa15.57■□□□□ 0.08
CRLF3-201ENST00000324238 A0A096LNJ9 63 aa15.56■□□□□ 0.08
CRLF3-201ENST00000324238 CT45A10P0DMU9 189 aa15.56■□□□□ 0.08
CRLF3-201ENST00000324238 PET117Q6UWS5 81 aa15.56■□□□□ 0.08
CRLF3-201ENST00000324238 PPP1R14DQ9NXH3 145 aa15.56■□□□□ 0.08
CRLF3-201ENST00000324238 NDUFS7O75251 213 aa15.56■□□□□ 0.08
CRLF3-201ENST00000324238 HOXB4P17483 251 aaPredicted RBP15.56■□□□□ 0.08
CRLF3-201ENST00000324238 PIP4P2Q8N4L2 257 aa15.56■□□□□ 0.08
CRLF3-201ENST00000324238 SH2D1AO60880 128 aa15.55■□□□□ 0.08
CRLF3-201ENST00000324238 ZNF80P51504 273 aaPredicted RBP15.55■□□□□ 0.08
CRLF3-201ENST00000324238 C18orf15Q96N68 181 aa15.55■□□□□ 0.08
CRLF3-201ENST00000324238 VGLL1Q99990 258 aa15.55■□□□□ 0.08
CRLF3-201ENST00000324238 TRAV8-6A0A0B4J262 113 aa15.55■□□□□ 0.08
CRLF3-201ENST00000324238 K7EQM0 130 aa15.55■□□□□ 0.08
CRLF3-201ENST00000324238 DYNAPQ8N1N2 210 aa15.55■□□□□ 0.08
CRLF3-201ENST00000324238 TMEM189A5PLL7 270 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 NBR2O15453 112 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 NHLH1Q02575 133 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 LINC01545Q5VT33 79 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 FAM231BA6NCW3 169 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 GPR183P32249 361 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 CACNG7P62955 275 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 C16orf54Q6UWD8 224 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 PRELID3AQ96N28 172 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 LY6LH3BQJ8 138 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 MRPS12O15235 138 aaKnown RBP15.54■□□□□ 0.08
CRLF3-201ENST00000324238 OR10AG1Q8NH19 301 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 FANCD2OSQ96PS1 177 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 RAXQ9Y2V3 346 aa15.54■□□□□ 0.08
CRLF3-201ENST00000324238 RHOGP84095 191 aa15.53■□□□□ 0.08
CRLF3-201ENST00000324238 PSG9Q00887 426 aa15.53■□□□□ 0.08
CRLF3-201ENST00000324238 C2orf91Q6ZV80 131 aa15.53■□□□□ 0.08
CRLF3-201ENST00000324238 IGHV3-49A0A0A0MS15 119 aa15.53■□□□□ 0.08
CRLF3-201ENST00000324238 K7ENP7 123 aa15.53■□□□□ 0.08
CRLF3-201ENST00000324238 EGR2P11161 476 aaPredicted RBP15.53■□□□□ 0.08
CRLF3-201ENST00000324238 TWIST1Q15672 202 aa15.53■□□□□ 0.08
CRLF3-201ENST00000324238 TM4SF20Q53R12 229 aa15.53■□□□□ 0.08
CRLF3-201ENST00000324238 VKORC1Q9BQB6 163 aa15.53■□□□□ 0.08
CRLF3-201ENST00000324238 AAMDCQ9H7C9 122 aa15.53■□□□□ 0.08
CRLF3-201ENST00000324238 TNFRSF14Q92956 283 aa15.52■□□□□ 0.08
CRLF3-201ENST00000324238 CSN1S1P47710 185 aa15.52■□□□□ 0.07
CRLF3-201ENST00000324238 ERCC8Q13216 396 aa15.52■□□□□ 0.07
CRLF3-201ENST00000324238 DEFB125Q8N687 156 aa15.52■□□□□ 0.07
CRLF3-201ENST00000324238 DPM3Q9P2X0 92 aa15.52■□□□□ 0.07
CRLF3-201ENST00000324238 MRPL51Q4U2R6 128 aaKnown RBP15.51■□□□□ 0.07
CRLF3-201ENST00000324238 CRYBG3Q68DQ2 2970 aa15.51■□□□□ 0.07
CRLF3-201ENST00000324238 F8W735 103 aaPredicted RBP15.51■□□□□ 0.07
CRLF3-201ENST00000324238 NPYP01303 97 aa15.51■□□□□ 0.07
CRLF3-201ENST00000324238 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.51■□□□□ 0.074e-11■■■■■ 41.7
CRLF3-201ENST00000324238 TTTY13Q9BZ97 58 aa15.51■□□□□ 0.07
CRLF3-201ENST00000324238 CENPEQ02224 2701 aa15.5■□□□□ 0.07
CRLF3-201ENST00000324238 EVI2AP22794 236 aa15.5■□□□□ 0.07
CRLF3-201ENST00000324238 RAB37Q96AX2 223 aa15.5■□□□□ 0.07
CRLF3-201ENST00000324238 ORM1P02763 201 aa15.5■□□□□ 0.07
CRLF3-201ENST00000324238 GATA1P15976 413 aaPredicted RBP15.5■□□□□ 0.07
CRLF3-201ENST00000324238 C12orf54Q6X4T0 127 aa15.5■□□□□ 0.07
CRLF3-201ENST00000324238 RNF182Q8N6D2 247 aa15.5■□□□□ 0.07
CRLF3-201ENST00000324238 THYN1Q9P016 225 aa15.5■□□□□ 0.07
CRLF3-201ENST00000324238 CFHR4Q92496 578 aa15.49■□□□□ 0.07
CRLF3-201ENST00000324238 TMEM11P17152 192 aa15.49■□□□□ 0.07
CRLF3-201ENST00000324238 CKS2P33552 79 aa15.49■□□□□ 0.07
CRLF3-201ENST00000324238 FAM104BQ5XKR9 115 aa15.49■□□□□ 0.07
CRLF3-201ENST00000324238 RABAC1Q9UI14 185 aa15.49■□□□□ 0.07
CRLF3-201ENST00000324238 COX8AP10176 69 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 NBL1P41271 181 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 NMUP48645 174 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 C5orf64Q2M2E5 130 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 PCP2Q8IVA1 136 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 DKK2Q9UBU2 259 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 TRAV30A0A087WSZ9 112 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 WI2-2373I1.2A0A1W2PRP0 233 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 C7orf71A4D174 169 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 PRAC2D3DTV9 90 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 C21orf62Q9NYP8 219 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 ZNF207O43670 478 aaKnown RBP15.48■□□□□ 0.07
CRLF3-201ENST00000324238 MFAP4P55083 255 aa15.48■□□□□ 0.07
CRLF3-201ENST00000324238 HIST1H1AQ02539 215 aaPredicted RBP15.48■□□□□ 0.07
CRLF3-201ENST00000324238 S100A7P31151 101 aa15.47■□□□□ 0.07
CRLF3-201ENST00000324238 Q6ZQT7 251 aa15.47■□□□□ 0.07
CRLF3-201ENST00000324238 ORMDL3Q8N138 153 aa15.47■□□□□ 0.07
CRLF3-201ENST00000324238 SMAD5-AS1Q9Y6J3 95 aa15.47■□□□□ 0.07
CRLF3-201ENST00000324238 ITPR1Q14643 2758 aa15.47■□□□□ 0.07
CRLF3-201ENST00000324238 CELSR2Q9HCU4 2923 aa15.47■□□□□ 0.07
CRLF3-201ENST00000324238 K7EP13 123 aa15.47■□□□□ 0.07
CRLF3-201ENST00000324238 PRR25Q96S07 402 aa15.47■□□□□ 0.07
CRLF3-201ENST00000324238 ARPC1AQ92747 370 aa15.46■□□□□ 0.07
CRLF3-201ENST00000324238 K7EMI3 77 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms