RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 DTX1Q86Y01 620 aa13.55□□□□□ -0.24
CNTNAP3-201ENST00000297668 ZNF492Q9P255 531 aa13.55□□□□□ -0.24
CNTNAP3-201ENST00000297668 TCF20Q9UGU0 1960 aaKnown RBP13.55□□□□□ -0.24
CNTNAP3-201ENST00000297668 FAM231BA6NCW3 169 aa13.55□□□□□ -0.24
CNTNAP3-201ENST00000297668 INSP01308 110 aa13.55□□□□□ -0.24
CNTNAP3-201ENST00000297668 C6orf226Q5I0X4 101 aa13.55□□□□□ -0.24
CNTNAP3-201ENST00000297668 C2orf82Q6UX34 121 aa13.55□□□□□ -0.24
CNTNAP3-201ENST00000297668 CHAC1Q9BUX1 264 aa13.55□□□□□ -0.24
CNTNAP3-201ENST00000297668 SSBP2P81877 361 aaPredicted RBP13.54□□□□□ -0.24
CNTNAP3-201ENST00000297668 LY6G5BQ8NDX9 201 aa13.54□□□□□ -0.24
CNTNAP3-201ENST00000297668 C18orf32Q8TCD1 76 aa13.54□□□□□ -0.24
CNTNAP3-201ENST00000297668 UBE2E2Q96LR5 201 aa13.54□□□□□ -0.24
CNTNAP3-201ENST00000297668 ARTNQ5T4W7 220 aa13.54□□□□□ -0.24
CNTNAP3-201ENST00000297668 LCNL1Q6ZST4 164 aa13.54□□□□□ -0.24
CNTNAP3-201ENST00000297668 NDUFA4L2Q9NRX3 87 aa13.54□□□□□ -0.24
CNTNAP3-201ENST00000297668 C1QTNF4Q9BXJ3 329 aa13.54□□□□□ -0.24
CNTNAP3-201ENST00000297668 MYMXA0A1B0GTQ4 84 aa13.54□□□□□ -0.24
CNTNAP3-201ENST00000297668 TRAV13-1A0A0B4J241 112 aa13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 RPL35AP18077 110 aaKnown RBP13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 STPG4Q8N801 248 aa13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 KLHL30-AS1Q8NEE0 82 aa13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 TIMM21Q9BVV7 248 aa13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 YPEL3P61236 119 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 TMEM213A2RRL7 107 aa13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 LGALS1P09382 135 aaKnown RBP13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 CT83Q5H943 113 aa13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 TMEM75Q8N9X5 138 aa13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 PTPRDP23468 1912 aa13.53□□□□□ -0.24
CNTNAP3-201ENST00000297668 A0A1B0GUS0 222 aa13.52□□□□□ -0.24
CNTNAP3-201ENST00000297668 NDUFB8O95169 186 aa13.52□□□□□ -0.24
CNTNAP3-201ENST00000297668 PRIMA1Q86XR5 153 aa13.52□□□□□ -0.24
CNTNAP3-201ENST00000297668 CYYR1Q96J86 154 aa13.52□□□□□ -0.24
CNTNAP3-201ENST00000297668 C20orf144Q9BQM9 153 aa13.52□□□□□ -0.24
CNTNAP3-201ENST00000297668 SPXQ9BT56 116 aa13.52□□□□□ -0.24
CNTNAP3-201ENST00000297668 YLPM1P49750 1951 aaKnown RBP13.52□□□□□ -0.24
CNTNAP3-201ENST00000297668 LTBP1Q14766 1721 aa13.52□□□□□ -0.25
CNTNAP3-201ENST00000297668 POLR3KQ9Y2Y1 108 aaPredicted RBP13.52□□□□□ -0.25
CNTNAP3-201ENST00000297668 DOCK9Q9BZ29 2069 aa13.52□□□□□ -0.25
CNTNAP3-201ENST00000297668 GATA4P43694 442 aa13.52□□□□□ -0.25
CNTNAP3-201ENST00000297668 SYNJ2BPP57105 145 aa13.52□□□□□ -0.25
CNTNAP3-201ENST00000297668 Q6ZR03 302 aa13.52□□□□□ -0.25
CNTNAP3-201ENST00000297668 CITED2Q99967 270 aaPredicted RBP13.52□□□□□ -0.25
CNTNAP3-201ENST00000297668 CFHR2P36980 270 aa13.51□□□□□ -0.25
CNTNAP3-201ENST00000297668 FAM110DQ8TAY7 271 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP3-201ENST00000297668 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP3-201ENST00000297668 WISP1O95388 367 aa13.51□□□□□ -0.25
CNTNAP3-201ENST00000297668 IGKV1-39P01597 117 aa13.51□□□□□ -0.25
CNTNAP3-201ENST00000297668 IGKV1D-39P04432 117 aa13.51□□□□□ -0.25
CNTNAP3-201ENST00000297668 VWA8A3KMH1 1905 aa13.51□□□□□ -0.25
CNTNAP3-201ENST00000297668 ATP6V0E1O15342 81 aa13.51□□□□□ -0.25
CNTNAP3-201ENST00000297668 LAMTOR3Q9UHA4 124 aa13.51□□□□□ -0.25
CNTNAP3-201ENST00000297668 SLC25A16P16260 332 aa13.5□□□□□ -0.25
CNTNAP3-201ENST00000297668 FAM104BQ5XKR9 115 aa13.5□□□□□ -0.25
CNTNAP3-201ENST00000297668 BOD1L2Q8IYS8 172 aa13.5□□□□□ -0.25
CNTNAP3-201ENST00000297668 TRBV19A0A075B6N1 114 aa13.5□□□□□ -0.25
CNTNAP3-201ENST00000297668 DEFB131AP59861 70 aa13.5□□□□□ -0.25
CNTNAP3-201ENST00000297668 Q8TCH9 128 aa13.5□□□□□ -0.25
CNTNAP3-201ENST00000297668 UBE2E1P51965 193 aa13.5□□□□□ -0.25
CNTNAP3-201ENST00000297668 IL17RELQ6ZVW7 336 aa13.5□□□□□ -0.25
CNTNAP3-201ENST00000297668 SBF1O95248 1867 aa13.5□□□□□ -0.25
CNTNAP3-201ENST00000297668 LEPROTO15243 131 aa13.49□□□□□ -0.25
CNTNAP3-201ENST00000297668 ZNF726P1Q15940 193 aa13.49□□□□□ -0.25
CNTNAP3-201ENST00000297668 PROK2Q9HC23 129 aa13.49□□□□□ -0.25
CNTNAP3-201ENST00000297668 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
CNTNAP3-201ENST00000297668 PRSS46E5RG02 174 aa13.49□□□□□ -0.25
CNTNAP3-201ENST00000297668 HIST1H4AP62805 103 aaKnown RBP13.49□□□□□ -0.25
CNTNAP3-201ENST00000297668 HEATR5AQ86XA9 2040 aa13.49□□□□□ -0.25
CNTNAP3-201ENST00000297668 ZNF833PQ6ZTB9 187 aa13.49□□□□□ -0.25
CNTNAP3-201ENST00000297668 TRAV8-3A0A0A6YYJ7 113 aa13.48□□□□□ -0.25
CNTNAP3-201ENST00000297668 E9PQ18 207 aa13.48□□□□□ -0.25
CNTNAP3-201ENST00000297668 WDR86Q86TI4 376 aa13.48□□□□□ -0.25
CNTNAP3-201ENST00000297668 DKK1O94907 266 aa13.48□□□□□ -0.25
CNTNAP3-201ENST00000297668 LINC01356Q8N9X3 169 aa13.48□□□□□ -0.25
CNTNAP3-201ENST00000297668 KLF2Q9Y5W3 355 aaPredicted RBP13.48□□□□□ -0.25
CNTNAP3-201ENST00000297668 C2orf66Q6UXQ4 117 aa13.48□□□□□ -0.25
CNTNAP3-201ENST00000297668 C17orf58Q2M2W7 97 aa13.47□□□□□ -0.25
CNTNAP3-201ENST00000297668 RNF166Q96A37 237 aaPredicted RBP13.47□□□□□ -0.25
CNTNAP3-201ENST00000297668 ZNF524Q96C55 264 aa13.47□□□□□ -0.25
CNTNAP3-201ENST00000297668 C8orf49Q96NF6 230 aa13.47□□□□□ -0.25
CNTNAP3-201ENST00000297668 TP53TG1Q9Y2A0 90 aa13.47□□□□□ -0.25
CNTNAP3-201ENST00000297668 MSRB2Q9Y3D2 182 aa13.47□□□□□ -0.25
CNTNAP3-201ENST00000297668 ADAMTSL5Q6ZMM2 481 aa13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 FAM231DQ6ZW35 169 aa13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 OVOL2Q9BRP0 275 aa13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 C9JAW5 83 aa13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 RSPO1Q2MKA7 263 aaPredicted RBP13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 RUSC1-AS1Q66K80 236 aa13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 RHODO00212 210 aa13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 DEFB130BP0DP73 79 aa13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 DEFB130AP0DP74 79 aa13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 LOXP28300 417 aaPredicted RBP13.46□□□□□ -0.25
CNTNAP3-201ENST00000297668 KNCNA6PVL3 124 aa13.46□□□□□ -0.26
CNTNAP3-201ENST00000297668 DUX4L9Q6RFH8 374 aaPredicted RBP13.46□□□□□ -0.26
CNTNAP3-201ENST00000297668 TSSC4Q9Y5U2 329 aaPredicted RBP13.46□□□□□ -0.26
CNTNAP3-201ENST00000297668 V9GYV3 84 aa13.46□□□□□ -0.26
CNTNAP3-201ENST00000297668 G3V318 75 aa13.45□□□□□ -0.26
CNTNAP3-201ENST00000297668 MSMBP08118 114 aa13.45□□□□□ -0.26
CNTNAP3-201ENST00000297668 MALRD1Q5VYJ5 2156 aa13.45□□□□□ -0.26
CNTNAP3-201ENST00000297668 WT1-ASQ06250 92 aa13.45□□□□□ -0.26
CNTNAP3-201ENST00000297668 UNQ6494/PRO21346Q6UXR6 183 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms