RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ADMP35318 185 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 MLANAQ16655 118 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 DEFB114Q30KQ6 69 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 TMEM14EPQ6UXP3 125 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 SSX7Q7RTT5 188 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 RPP25LQ8N5L8 163 aaKnown RBP9.15□□□□□ -0.94
HMGB2-201ENST00000296503 DTD1Q8TEA8 209 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 CACNG8Q8WXS5 425 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 HSPB7Q9UBY9 170 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 SELENOKQ9Y6D0 94 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.94
HMGB2-201ENST00000296503 TMEM213A2RRL7 107 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 F6UZH7 168 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 RPL29P47914 159 aaKnown RBP9.15□□□□□ -0.95
HMGB2-201ENST00000296503 CD69Q07108 199 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 Q0VG73 95 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 CD300EQ496F6 205 aaPredicted RBP9.15□□□□□ -0.95
HMGB2-201ENST00000296503 C2orf83Q53S99 150 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 PVRIGQ6DKI7 326 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 SLC24A4Q8NFF2 622 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 OR2K2Q8NGT1 345 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 ORAOV1Q8WV07 137 aa9.15□□□□□ -0.95
HMGB2-201ENST00000296503 TECRQ9NZ01 308 aaKnown RBP9.15□□□□□ -0.95
HMGB2-201ENST00000296503 IGHV3OR16-8A0A075B7F1 116 aa9.14□□□□□ -0.95
HMGB2-201ENST00000296503 NPY1RP25929 384 aa9.14□□□□□ -0.95
HMGB2-201ENST00000296503 ZNF705AQ6ZN79 300 aaPredicted RBP9.14□□□□□ -0.95
HMGB2-201ENST00000296503 OR4B1Q8NGF8 309 aa9.14□□□□□ -0.95
HMGB2-201ENST00000296503 CMTM2Q8TAZ6 248 aa9.14□□□□□ -0.95
HMGB2-201ENST00000296503 FNDC4Q9H6D8 234 aaPredicted RBP9.14□□□□□ -0.95
HMGB2-201ENST00000296503 MRPL27Q9P0M9 148 aaKnown RBP9.14□□□□□ -0.95
HMGB2-201ENST00000296503 PRKDCP78527 4128 aaKnown RBP9.13□□□□□ -0.95
HMGB2-201ENST00000296503 K7EP13 123 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 ZNF207O43670 478 aaKnown RBP9.13□□□□□ -0.95
HMGB2-201ENST00000296503 FGF8P55075 233 aaPredicted RBP9.13□□□□□ -0.95
HMGB2-201ENST00000296503 ARL16Q0P5N6 197 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 VWC2Q2TAL6 325 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 COX19Q49B96 90 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 LINC01551Q86U37 167 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 OR2D3Q8NGH3 330 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 TMEM190Q8WZ59 177 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 SLC45A2Q9UMX9 530 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 ZNF705FA8MVS1 300 aaPredicted RBP9.13□□□□□ -0.95
HMGB2-201ENST00000296503 ZNF705DP0CH99 300 aaPredicted RBP9.13□□□□□ -0.95
HMGB2-201ENST00000296503 ZNF705BP0CI00 300 aaPredicted RBP9.13□□□□□ -0.95
HMGB2-201ENST00000296503 GTSCR1Q86UQ5 136 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 RPUSD4Q96CM3 377 aaKnown RBP9.13□□□□□ -0.95
HMGB2-201ENST00000296503 B9D2Q9BPU9 175 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 TMEM147Q9BVK8 224 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 DAZ1Q9NQZ3 744 aaKnown RBP9.13□□□□□ -0.95
HMGB2-201ENST00000296503 KCNIP2Q9NS61 270 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 LY96Q9Y6Y9 160 aa9.13□□□□□ -0.95
HMGB2-201ENST00000296503 K7EMT4 169 aa9.12□□□□□ -0.95
HMGB2-201ENST00000296503 SCGB2A1O75556 95 aa9.12□□□□□ -0.95
HMGB2-201ENST00000296503 C8orf88P0DMB2 117 aa9.12□□□□□ -0.95
HMGB2-201ENST00000296503 IAPPP10997 89 aa9.12□□□□□ -0.95
HMGB2-201ENST00000296503 ETFRF1Q6IPR1 90 aa9.12□□□□□ -0.95
HMGB2-201ENST00000296503 RBPMS2Q6ZRY4 209 aaKnown RBP9.12□□□□□ -0.95
HMGB2-201ENST00000296503 C15orf62A8K5M9 175 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 ZNF785A8K8V0 405 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 ATP5IP56385 69 aaPredicted RBP9.11□□□□□ -0.95
HMGB2-201ENST00000296503 RPS20P60866 119 aaKnown RBP9.11□□□□□ -0.95
HMGB2-201ENST00000296503 SLC38A11Q08AI6 406 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 Q8N1Y9 231 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 SLC35E1Q96K37 410 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 RNF2Q99496 336 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 VAMP8Q9BV40 100 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 MRPL36Q9P0J6 103 aaKnown RBP9.11□□□□□ -0.95
HMGB2-201ENST00000296503 TRAV30A0A087WSZ9 112 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 CDKN1BP46527 198 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 RPL19P84098 196 aaKnown RBP9.11□□□□□ -0.95
HMGB2-201ENST00000296503 COTL1Q14019 142 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 FAM78BQ5VT40 261 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 TOMM20LQ6UXN7 152 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 Q6ZWC4 215 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 TMEM256Q8N2U0 113 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 OR10G9Q8NGN4 311 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 OR10G7Q8NGN6 311 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 ASCL2Q99929 193 aa9.11□□□□□ -0.95
HMGB2-201ENST00000296503 C17orf112F2Z3M2 114 aa9.1□□□□□ -0.95
HMGB2-201ENST00000296503 TOMM40O96008 361 aa9.1□□□□□ -0.95
HMGB2-201ENST00000296503 CTRLP40313 264 aa9.1□□□□□ -0.95
HMGB2-201ENST00000296503 RPP30P78346 268 aaKnown RBP9.1□□□□□ -0.95
HMGB2-201ENST00000296503 TMEM61Q8N0U2 210 aa9.1□□□□□ -0.95
HMGB2-201ENST00000296503 CIB3Q96Q77 187 aaPredicted RBP9.1□□□□□ -0.95
HMGB2-201ENST00000296503 IGHV3-49A0A0A0MS15 119 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 PMS2P5A8MQ11 134 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 OR5I1Q13606 314 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 TIGITQ495A1 244 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 TMEM116Q8NCL8 245 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 NPIPB3Q92617 1050 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 SFRP2Q96HF1 295 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 UQCR10Q9UDW1 63 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 SMPXQ9UHP9 88 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 TP53TG3Q9ULZ0 132 aa9.09□□□□□ -0.95
HMGB2-201ENST00000296503 IGHV3OR16-13A0A075B7E8 117 aa9.08□□□□□ -0.96
HMGB2-201ENST00000296503 IGHV3-74A0A0B4J1X5 117 aa9.08□□□□□ -0.96
HMGB2-201ENST00000296503 TRAV25A0A0B4J276 109 aa9.08□□□□□ -0.96
HMGB2-201ENST00000296503 IGHV7-4-1A0A0J9YVY3 117 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms