RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 PSMG3Q9BT73 122 aaPredicted RBP13.54□□□□□ -0.24
UPK3B-201ENST00000257632 PRELID1Q9Y255 219 aa13.54□□□□□ -0.24
UPK3B-201ENST00000257632 NDUFB4O95168 129 aa13.53□□□□□ -0.24
UPK3B-201ENST00000257632 UBE2L3P68036 154 aaKnown RBP13.53□□□□□ -0.24
UPK3B-201ENST00000257632 RPL7L1Q6DKI1 246 aaKnown RBP13.53□□□□□ -0.24
UPK3B-201ENST00000257632 ZNF705AQ6ZN79 300 aaPredicted RBP13.53□□□□□ -0.24
UPK3B-201ENST00000257632 OR10G4Q8NGN3 311 aa13.53□□□□□ -0.24
UPK3B-201ENST00000257632 OR10G9Q8NGN4 311 aa13.53□□□□□ -0.24
UPK3B-201ENST00000257632 OR10G7Q8NGN6 311 aa13.53□□□□□ -0.24
UPK3B-201ENST00000257632 C11orf45Q8TAV5 145 aa13.53□□□□□ -0.24
UPK3B-201ENST00000257632 MRPL53Q96EL3 112 aaKnown RBP13.53□□□□□ -0.24
UPK3B-201ENST00000257632 IGF2BP2-AS1Q96M15 143 aa13.53□□□□□ -0.24
UPK3B-201ENST00000257632 TMEM208Q9BTX3 173 aa13.53□□□□□ -0.24
UPK3B-201ENST00000257632 PRAC2D3DTV9 90 aa13.52□□□□□ -0.25
UPK3B-201ENST00000257632 M0R3E3 92 aa13.52□□□□□ -0.25
UPK3B-201ENST00000257632 INSP01308 110 aa13.52□□□□□ -0.25
UPK3B-201ENST00000257632 EXOC3-AS1Q8N2X6 119 aa13.52□□□□□ -0.25
UPK3B-201ENST00000257632 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.25
UPK3B-201ENST00000257632 FXYD5Q96DB9 178 aa13.52□□□□□ -0.25
UPK3B-201ENST00000257632 EIF3GO75821 320 aaKnown RBP eCLIP13.51□□□□□ -0.25
UPK3B-201ENST00000257632 RBMY1A1P0DJD3 496 aaKnown RBP13.51□□□□□ -0.25
UPK3B-201ENST00000257632 RBMY1CP0DJD4 496 aa13.51□□□□□ -0.25
UPK3B-201ENST00000257632 SERF2P84101 59 aa13.51□□□□□ -0.25
UPK3B-201ENST00000257632 ICAM4Q14773 271 aa13.51□□□□□ -0.25
UPK3B-201ENST00000257632 RBMY1FQ15415 496 aaKnown RBP13.51□□□□□ -0.25
UPK3B-201ENST00000257632 BAP18Q8IXM2 172 aa13.51□□□□□ -0.25
UPK3B-201ENST00000257632 GNPNAT1Q96EK6 184 aaPredicted RBP13.51□□□□□ -0.25
UPK3B-201ENST00000257632 NEU1Q99519 415 aa13.51□□□□□ -0.25
UPK3B-201ENST00000257632 DNAH7Q8WXX0 4024 aa13.51□□□□□ -0.25
UPK3B-201ENST00000257632 TRAV12-2A0A075B6T6 113 aa13.5□□□□□ -0.25
UPK3B-201ENST00000257632 SMIM9A6NGZ8 99 aa13.5□□□□□ -0.25
UPK3B-201ENST00000257632 TAAR5O14804 337 aa13.5□□□□□ -0.25
UPK3B-201ENST00000257632 HBE1P02100 147 aa13.5□□□□□ -0.25
UPK3B-201ENST00000257632 MBP02144 154 aa13.5□□□□□ -0.25
UPK3B-201ENST00000257632 CDC34P49427 236 aaPredicted RBP13.5□□□□□ -0.25
UPK3B-201ENST00000257632 C1orf158Q8N1D5 194 aa13.5□□□□□ -0.25
UPK3B-201ENST00000257632 ZNF503Q96F45 646 aa13.5□□□□□ -0.25
UPK3B-201ENST00000257632 PHYHIPLQ96FC7 376 aa13.5□□□□□ -0.25
UPK3B-201ENST00000257632 SH3BGRL3Q9H299 93 aa13.5□□□□□ -0.25
UPK3B-201ENST00000257632 JTBO76095 146 aa13.49□□□□□ -0.25
UPK3B-201ENST00000257632 TSPOP30536 169 aa13.49□□□□□ -0.25
UPK3B-201ENST00000257632 CDKN1BP46527 198 aa13.49□□□□□ -0.25
UPK3B-201ENST00000257632 NANOS2P60321 138 aaKnown RBP13.49□□□□□ -0.25
UPK3B-201ENST00000257632 PQLC2Q6ZP29 291 aa13.49□□□□□ -0.25
UPK3B-201ENST00000257632 NUPR2A6NF83 97 aa13.48□□□□□ -0.25
UPK3B-201ENST00000257632 NPIPB6E9PJ23 425 aa13.48□□□□□ -0.25
UPK3B-201ENST00000257632 HMGB3O15347 200 aaKnown RBP13.48□□□□□ -0.25
UPK3B-201ENST00000257632 CRXO43186 299 aaPredicted RBP13.48□□□□□ -0.25
UPK3B-201ENST00000257632 RANP62826 216 aaKnown RBP13.48□□□□□ -0.25
UPK3B-201ENST00000257632 RPP25LQ8N5L8 163 aaKnown RBP13.48□□□□□ -0.25
UPK3B-201ENST00000257632 TMEM189A5PLL7 270 aa13.47□□□□□ -0.25
UPK3B-201ENST00000257632 CSN1S1P47710 185 aa13.47□□□□□ -0.25
UPK3B-201ENST00000257632 EMP1P54849 157 aa13.47□□□□□ -0.25
UPK3B-201ENST00000257632 RRN3P1Q2M238 152 aa13.47□□□□□ -0.25
UPK3B-201ENST00000257632 LYPD1Q8N2G4 141 aa13.47□□□□□ -0.25
UPK3B-201ENST00000257632 Q9H3A6 140 aa13.47□□□□□ -0.25
UPK3B-201ENST00000257632 DYNC2H1Q8NCM8 4307 aaKnown RBP13.47□□□□□ -0.25
UPK3B-201ENST00000257632 TENM2Q9NT68 2774 aa13.46□□□□□ -0.25
UPK3B-201ENST00000257632 HMSDA8MTL9 139 aa13.46□□□□□ -0.25
UPK3B-201ENST00000257632 LEPP41159 167 aa13.46□□□□□ -0.25
UPK3B-201ENST00000257632 ZNF345Q14585 488 aa13.46□□□□□ -0.25
UPK3B-201ENST00000257632 KCNRGQ8N5I3 272 aa13.46□□□□□ -0.25
UPK3B-201ENST00000257632 PHLDA1Q8WV24 401 aaPredicted RBP13.46□□□□□ -0.25
UPK3B-201ENST00000257632 RAB24Q969Q5 203 aa13.46□□□□□ -0.25
UPK3B-201ENST00000257632 ARPC5LQ9BPX5 153 aa13.46□□□□□ -0.25
UPK3B-201ENST00000257632 ACTR3CQ9C0K3 210 aaPredicted RBP13.46□□□□□ -0.25
UPK3B-201ENST00000257632 IGKV2-40A0A087WW87 121 aaPredicted RBP13.45□□□□□ -0.26
UPK3B-201ENST00000257632 LOC102723971A0A1B0GUV8 181 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 J3KRW8 73 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 IGKV2D-40P01614 121 aaPredicted RBP13.45□□□□□ -0.26
UPK3B-201ENST00000257632 ARL14EPLP0DKL9 152 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 CT45A10P0DMU9 189 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 ERCC8Q13216 396 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 FAM74A1Q5RGS3 127 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 AKR1C8PQ5T2L2 129 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 CEMP1Q6PRD7 247 aaPredicted RBP13.45□□□□□ -0.26
UPK3B-201ENST00000257632 Q6ZNX1 250 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 TMEM256Q8N2U0 113 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 OR11H4Q8NGC9 324 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 LINC00477Q96M19 166 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 LINC01587Q99440 93 aa13.45□□□□□ -0.26
UPK3B-201ENST00000257632 KLK5Q9Y337 293 aaPredicted RBP13.45□□□□□ -0.26
UPK3B-201ENST00000257632 A0A0D9SG52 128 aa13.44□□□□□ -0.26
UPK3B-201ENST00000257632 STAG3L2P0CL84 134 aa13.44□□□□□ -0.26
UPK3B-201ENST00000257632 STAG3L3P0CL85 134 aa13.44□□□□□ -0.26
UPK3B-201ENST00000257632 TMEM78Q5T7P6 136 aa13.44□□□□□ -0.26
UPK3B-201ENST00000257632 CYTL1Q9NRR1 136 aa13.44□□□□□ -0.26
UPK3B-201ENST00000257632 KANTRA0A1W2PQU2 76 aa13.43□□□□□ -0.26
UPK3B-201ENST00000257632 ZNF705GA8MUZ8 300 aaPredicted RBP13.43□□□□□ -0.26
UPK3B-201ENST00000257632 CMTM2Q8TAZ6 248 aa13.43□□□□□ -0.26
UPK3B-201ENST00000257632 RXFP4Q8TDU9 374 aa13.43□□□□□ -0.26
UPK3B-201ENST00000257632 HYLS1Q96M11 299 aa13.43□□□□□ -0.26
UPK3B-201ENST00000257632 AGPAT4-IT1Q9H0P7 198 aa13.43□□□□□ -0.26
UPK3B-201ENST00000257632 OTORQ9NRC9 128 aa13.43□□□□□ -0.26
UPK3B-201ENST00000257632 CELA1Q9UNI1 258 aa13.43□□□□□ -0.26
UPK3B-201ENST00000257632 RYR2Q92736 4967 aa13.42□□□□□ -0.26
UPK3B-201ENST00000257632 PGPA6NDG6 321 aa13.42□□□□□ -0.26
UPK3B-201ENST00000257632 SPART-AS1P0CW21 52 aa13.42□□□□□ -0.26
UPK3B-201ENST00000257632 HTN1P15515 57 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms