RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 ZNF747Q9BV97 191 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 CSTL1Q9H114 145 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 C7orf69Q9H7B7 122 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 INTS1Q8N201 2190 aaKnown RBP3.32□□□□□ -1.88
UBE4A-201ENST00000252108 TRAV5A0A0B4J249 113 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 hDV102S1A0JD36 115 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 CA1P00915 261 aaPredicted RBP3.32□□□□□ -1.88
UBE4A-201ENST00000252108 GNG5P63218 68 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 SSBP2P81877 361 aaPredicted RBP3.32□□□□□ -1.88
UBE4A-201ENST00000252108 C19orf54Q5BKX5 351 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 FAM104BQ5XKR9 115 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 Q6ZS92 163 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 PPP1R27Q86WC6 154 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 RNF125Q96EQ8 232 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 CITED1Q99966 193 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 NPFFR1Q9GZQ6 430 aa3.32□□□□□ -1.88
UBE4A-201ENST00000252108 C19orf71A6NCJ1 209 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 B9A039 149 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 NKX2-8O15522 239 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 IL4P05112 153 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 IGLC1P0CG04 106 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 Q1RN00 199 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 KLF17Q5JT82 389 aaPredicted RBP3.31□□□□□ -1.88
UBE4A-201ENST00000252108 TMEM78Q5T7P6 136 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 ST6GALNAC6Q969X2 333 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 SIGLEC8Q9NYZ4 499 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 CELSR1Q9NYQ6 3014 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 RPL13AP40429 203 aaKnown RBP3.31□□□□□ -1.88
UBE4A-201ENST00000252108 RBX1P62877 108 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 HCP5Q6MZN7 132 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 FDCSPQ8NFU4 85 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 LEAP2Q969E1 77 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 HIST1H4GQ99525 98 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 CHTOPQ9Y3Y2 248 aaKnown RBP3.31□□□□□ -1.88
UBE4A-201ENST00000252108 J3KRW8 73 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 PLAUP00749 431 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 CRYGCP07315 174 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 MYCNOSP40205 109 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 TCF15Q12870 199 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 TDRG1Q3Y452 100 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF493Q6ZR52 646 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 FAM216BQ8N7L0 139 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 LINC01560Q8TB33 94 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 PIFOQ8TCI5 191 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 A0A1W2PPM0 123 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 NPIPB6E9PJ23 425 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF562Q6V9R5 426 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 Q8N976 141 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 Q8NA96 180 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 RNASE8Q8TDE3 154 aaKnown RBP3.31□□□□□ -1.88
UBE4A-201ENST00000252108 KAAG1Q9UBP8 84 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 TRBV19A0A075B6N1 114 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 LOC389332A0A1B0GUA5 103 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 NDUFB8O95169 186 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 APOBEC3AP31941 199 aaPredicted RBP3.31□□□□□ -1.88
UBE4A-201ENST00000252108 FCGR2BP31994 310 aaPredicted RBP3.31□□□□□ -1.88
UBE4A-201ENST00000252108 DTX2Q86UW9 622 aa3.31□□□□□ -1.88
UBE4A-201ENST00000252108 KLK5Q9Y337 293 aaPredicted RBP3.31□□□□□ -1.88
UBE4A-201ENST00000252108 A0A087X0K7 114 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.3□□□□□ -1.88
UBE4A-201ENST00000252108 THBDP07204 575 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 LINC00205P59089 165 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF575Q86XF7 245 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 ITLN2Q8WWU7 325 aaPredicted RBP3.3□□□□□ -1.88
UBE4A-201ENST00000252108 IGFBPL1Q8WX77 278 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 SGK494Q96LW2 274 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 MLST8Q9BVC4 326 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 FNDC4Q9H6D8 234 aaPredicted RBP3.3□□□□□ -1.88
UBE4A-201ENST00000252108 ASH1LQ9NR48 2969 aaKnown RBP3.3□□□□□ -1.88
UBE4A-201ENST00000252108 IGKV1OR2-108A0A075B7D4 117 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 IGKV3OR2-268A0A0C4DH90 116 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 H3BRN7 92 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 SAP30O75446 220 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 CRYGBP07316 175 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 FAM106CPP0CH98 169 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 FAM106AQ4KMX7 169 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 SCGB1D4Q6XE38 83 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 OR10W1Q8NGF6 305 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF502Q8TBZ5 544 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF479Q96JC4 524 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 DPM3Q9P2X0 92 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 CYSLTR1Q9Y271 337 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 SIGLEC9Q9Y336 463 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 DOCK11Q5JSL3 2073 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 TFF1P04155 84 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 HOXB4P17483 251 aaPredicted RBP3.3□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF415Q09FC8 603 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 SPANXN1Q5VSR9 72 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 FAM57AQ8TBR7 257 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 COPS9Q8WXC6 57 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 ZNF48Q96MX3 618 aaPredicted RBP3.3□□□□□ -1.88
UBE4A-201ENST00000252108 C21orf62Q9NYP8 219 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 A0A1W2PPI3 338 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 TMEM178BH3BS89 294 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 NBR2O15453 112 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 IGLV2-23P01705 113 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 IGHV1-8P0DP01 117 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 GP9P14770 177 aa3.3□□□□□ -1.88
UBE4A-201ENST00000252108 SRSF9Q13242 221 aaKnown RBP eCLIP3.3□□□□□ -1.88
UBE4A-201ENST00000252108 GAGE13Q4V321 117 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms