RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 C18orf15Q96N68 181 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 RNF114Q9Y508 228 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 OOSP1A8MZH6 123 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 TSPOP30536 169 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 ZNF124Q15973 351 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 ERASQ7Z444 233 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 AMN1Q8IY45 258 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 TMEM208Q9BTX3 173 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 TMEM213A2RRL7 107 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 SAA4P35542 130 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 RAB9AP51151 201 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 ADORA2A-AS1P86434 159 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 AKAP13Q12802 2813 aa11.79□□□□□ -0.52
UBE2D4-201ENST00000222402 CRYGBP07316 175 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 PF4V1P10720 104 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 IGHV1-24A0A0C4DH33 117 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 NCR2O95944 276 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 TRGV3P03979 118 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 SIGLEC15Q6ZMC9 328 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 DLEU1O43261 78 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 IGLL1P15814 213 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 NMUP48645 174 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 EFNA4P52798 201 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 PDE6HQ13956 83 aa11.78□□□□□ -0.52
UBE2D4-201ENST00000222402 MAP1LC3AQ9H492 121 aa11.77□□□□□ -0.52
UBE2D4-201ENST00000222402 G3V318 75 aa11.77□□□□□ -0.52
UBE2D4-201ENST00000222402 MLST8Q9BVC4 326 aa11.77□□□□□ -0.52
UBE2D4-201ENST00000222402 PTPRBP23467 1997 aa11.77□□□□□ -0.53
UBE2D4-201ENST00000222402 ATP6V0E1O15342 81 aa11.77□□□□□ -0.53
UBE2D4-201ENST00000222402 SFTPCP11686 197 aa11.77□□□□□ -0.53
UBE2D4-201ENST00000222402 SCGB2A2Q13296 93 aa11.77□□□□□ -0.53
UBE2D4-201ENST00000222402 KLF5Q13887 457 aaPredicted RBP11.77□□□□□ -0.53
UBE2D4-201ENST00000222402 PET117Q6UWS5 81 aa11.77□□□□□ -0.53
UBE2D4-201ENST00000222402 SMKR1H3BMG3 65 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 HAX1O00165 279 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 HLA-DMBP28068 263 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 MYCNOSP40205 109 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 C12orf54Q6X4T0 127 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 UQCRFS1P47985 274 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 LINC00173Q6ZV60 143 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 C19orf71A6NCJ1 209 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 IGHV3-11P01762 117 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 ARL3P36405 182 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 IFI27P40305 119 aaPredicted RBP11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 ERCC8Q13216 396 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 BRD3OSQ6XYD6 125 aa11.76□□□□□ -0.53
UBE2D4-201ENST00000222402 NDPQ00604 133 aa11.75□□□□□ -0.53
UBE2D4-201ENST00000222402 FAM120AOSQ5T036 256 aa11.75□□□□□ -0.53
UBE2D4-201ENST00000222402 CLEC2AQ6UVW9 174 aa11.75□□□□□ -0.53
UBE2D4-201ENST00000222402 ATP5J2P56134 94 aa11.75□□□□□ -0.53
UBE2D4-201ENST00000222402 RNF182Q8N6D2 247 aa11.75□□□□□ -0.53
UBE2D4-201ENST00000222402 ST20Q9HBF5 79 aa11.75□□□□□ -0.53
UBE2D4-201ENST00000222402 IGLV11-55A0A075B6I3 123 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 FCER1GP30273 86 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 FBXL19-AS1Q494R0 122 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 NPBQ8NG41 125 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 TRAV40A0A0B4J280 105 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 FANCD2OSQ96PS1 177 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 PRR25Q96S07 402 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 ADGRG4Q8IZF6 3080 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 A0A1B0GXF2 115 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 CDSNQ15517 529 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 LDLRAD2Q5SZI1 272 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 MRPL52Q86TS9 123 aaKnown RBP11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 BCL6BQ8N143 479 aaPredicted RBP11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 VGLL1Q99990 258 aa11.74□□□□□ -0.53
UBE2D4-201ENST00000222402 EVI2AP22794 236 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 ZFP36P26651 326 aaKnown RBP11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 CACNG7P62955 275 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 SELENOKQ9Y6D0 94 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 FBLL1A6NHQ2 334 aaKnown RBP11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 VWC2LB2RUY7 222 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 NPFFO15130 113 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 HOXB4P17483 251 aaPredicted RBP11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 UBE2E1P51965 193 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 MPV17L2Q567V2 206 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 TTC9CQ8N5M4 171 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 STPG4Q8N801 248 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 SLC50A1Q9BRV3 221 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 PIMREGQ9BSJ6 248 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 LY6G5BQ8NDX9 201 aa11.73□□□□□ -0.53
UBE2D4-201ENST00000222402 DMXL1Q9Y485 3027 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 NDUFA3O95167 84 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 NPSP0C0P6 89 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 GNLYP22749 145 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 IGHV7-81A0A0B4J1V7 117 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 OR10J6PQ8NGY7 276 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 LY6LH3BQJ8 138 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 HBDP02042 147 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 MGPP08493 103 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 DYNAPQ8N1N2 210 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 CFHR4Q92496 578 aa11.72□□□□□ -0.53
UBE2D4-201ENST00000222402 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.53
UBE2D4-201ENST00000222402 MRGPRG-AS1Q2M3A8 158 aa11.71□□□□□ -0.53
UBE2D4-201ENST00000222402 FAM110DQ8TAY7 271 aaPredicted RBP11.71□□□□□ -0.53
UBE2D4-201ENST00000222402 TMEM190Q8WZ59 177 aa11.71□□□□□ -0.53
UBE2D4-201ENST00000222402 CTSGP08311 255 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms