RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 USMG5Q96IX5 58 aa12.77□□□□□ -0.36
PHGDH-216ENST00000641375 RABAC1Q9UI14 185 aa12.77□□□□□ -0.36
PHGDH-216ENST00000641375 TRBV24-1A0A075B6N3 115 aa12.77□□□□□ -0.37
PHGDH-216ENST00000641375 ZNF705GA8MUZ8 300 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-216ENST00000641375 H7BYZ3 331 aa12.77□□□□□ -0.37
PHGDH-216ENST00000641375 OCC1Q8TAD7 63 aa12.77□□□□□ -0.37
PHGDH-216ENST00000641375 PGPA6NDG6 321 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 PGPEP1LA6NFU8 196 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 CNN1P51911 297 aaKnown RBP12.76□□□□□ -0.37
PHGDH-216ENST00000641375 TPPP2P59282 170 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 IQCJQ1A5X6 159 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 GNB4Q9HAV0 340 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 GCN1Q92616 2671 aaKnown RBP12.76□□□□□ -0.37
PHGDH-216ENST00000641375 PEX7O00628 323 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 SLC25A5P05141 298 aaKnown RBP12.76□□□□□ -0.37
PHGDH-216ENST00000641375 Q6ZS46 218 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 CIARTQ8N365 385 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-216ENST00000641375 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 OR5B12Q96R08 314 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 Q9H3A6 140 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 ZNF586Q9NXT0 402 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 CDC42EP3Q9UKI2 254 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 EPDR1Q9UM22 224 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 PDZD2O15018 2839 aa12.76□□□□□ -0.37
PHGDH-216ENST00000641375 IGLC2P0DOY2 106 aa12.75□□□□□ -0.37
PHGDH-216ENST00000641375 CENPWQ5EE01 88 aa12.75□□□□□ -0.37
PHGDH-216ENST00000641375 C1orf194Q5T5A4 169 aa12.75□□□□□ -0.37
PHGDH-216ENST00000641375 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
PHGDH-216ENST00000641375 SFRP2Q96HF1 295 aa12.75□□□□□ -0.37
PHGDH-216ENST00000641375 AURKAIP1Q9NWT8 199 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-216ENST00000641375 KIR2DL5BA0A0G2JN68 375 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 KIR2DL5BA0A0G2JPC4 375 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 IGLV1-40P01703 118 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 RAB9AP51151 201 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 LYPD1Q8N2G4 141 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 TRBV19A0A075B6N1 114 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 SMAD7O15105 426 aaKnown RBP12.74□□□□□ -0.37
PHGDH-216ENST00000641375 MRPS12O15235 138 aaKnown RBP12.74□□□□□ -0.37
PHGDH-216ENST00000641375 RPL7P18124 248 aaKnown RBP12.74□□□□□ -0.37
PHGDH-216ENST00000641375 PDE6HQ13956 83 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 ZFAND3Q9H8U3 227 aa12.74□□□□□ -0.37
PHGDH-216ENST00000641375 UNC79Q9P2D8 2635 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 A0A0G2JLM5 398 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 CFHR3Q02985 330 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 MXRA5Q9NR99 2828 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 CCDC168Q8NDH2 2452 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 ZNF469Q96JG9 3925 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-216ENST00000641375 IGHV3-35A0A0C4DH35 117 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 PPP5D1E7EU14 171 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 H3BTX0 84 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 PF4V1P10720 104 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 GALR1P47211 349 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 TEX38Q6PEX7 206 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 IGF2BP2-AS1Q96M15 143 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 SRD5A3Q9H8P0 318 aa12.73□□□□□ -0.37
PHGDH-216ENST00000641375 ITPR2Q14571 2701 aa12.72□□□□□ -0.37
PHGDH-216ENST00000641375 K7EN84 100 aa12.72□□□□□ -0.37
PHGDH-216ENST00000641375 HOXA3O43365 443 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-216ENST00000641375 HNF1AP20823 631 aa12.72□□□□□ -0.37
PHGDH-216ENST00000641375 UBE2G1P62253 170 aa12.72□□□□□ -0.37
PHGDH-216ENST00000641375 CMTM2Q8TAZ6 248 aa12.72□□□□□ -0.37
PHGDH-216ENST00000641375 ZNF414Q96IQ9 312 aa12.72□□□□□ -0.37
PHGDH-216ENST00000641375 PRSS22Q9GZN4 317 aa12.72□□□□□ -0.37
PHGDH-216ENST00000641375 SRP14P37108 136 aaKnown RBP12.71□□□□□ -0.37
PHGDH-216ENST00000641375 TMEM183BQ1AE95 376 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 OR8I2Q8N0Y5 310 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 IMMP2LQ96T52 175 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 NPFFR1Q9GZQ6 430 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 KLF12Q9Y4X4 402 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 TCRAP04437 139 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 PFN1P07737 140 aaKnown RBP12.71□□□□□ -0.37
PHGDH-216ENST00000641375 ARL3P36405 182 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 GNG5P63218 68 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 KCNIP4Q6PIL6 250 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 OR10G8Q8NGN5 311 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 TMEM18Q96B42 140 aa12.71□□□□□ -0.37
PHGDH-216ENST00000641375 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.7□□□□□ -0.38
PHGDH-216ENST00000641375 TMEM89A2RUT3 159 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 SMIM12Q96EX1 92 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 FMC1Q96HJ9 113 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 LINC00479Q96M42 142 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 GPR82Q96P67 336 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 KLK15Q9H2R5 256 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 FLNAP21333 2647 aaKnown RBP12.7□□□□□ -0.38
PHGDH-216ENST00000641375 IGHG4P01861 327 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 DMRTA1Q5VZB9 504 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 SIGLEC15Q6ZMC9 328 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 METTL26Q96S19 204 aa12.7□□□□□ -0.38
PHGDH-216ENST00000641375 ISLRO14498 428 aa12.69□□□□□ -0.38
PHGDH-216ENST00000641375 IGLV2-8P01709 118 aa12.69□□□□□ -0.38
PHGDH-216ENST00000641375 PSG9Q00887 426 aa12.69□□□□□ -0.38
PHGDH-216ENST00000641375 BAGE2Q86Y30 109 aa12.69□□□□□ -0.38
PHGDH-216ENST00000641375 EXOC3-AS1Q8N2X6 119 aa12.69□□□□□ -0.38
PHGDH-216ENST00000641375 C17orf77Q96MU5 243 aa12.69□□□□□ -0.38
PHGDH-216ENST00000641375 AAMDCQ9H7C9 122 aa12.69□□□□□ -0.38
PHGDH-216ENST00000641375 RPH3ALQ9UNE2 315 aa12.69□□□□□ -0.38
PHGDH-216ENST00000641375 IGHV3OR16-8A0A075B7F1 116 aa12.69□□□□□ -0.38
PHGDH-216ENST00000641375 XKRY2A2RUG3 117 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms