RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 PATE2Q6UY27 113 aa13.58□□□□□ -0.24
CLN6-221ENST00000637494 BPIFA4PQ86YQ2 179 aa13.58□□□□□ -0.24
CLN6-221ENST00000637494 OR11H7Q8NGC8 314 aa13.58□□□□□ -0.24
CLN6-221ENST00000637494 DKK2Q9UBU2 259 aa13.58□□□□□ -0.24
CLN6-221ENST00000637494 CST7O76096 145 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 P0DMU3 169 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 FAM231AP0DMU4 169 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 FAM231CP0DMU5 169 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 CXCL3P19876 107 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 HBG1P69891 147 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 HBG2P69892 147 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 STX12Q86Y82 276 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 SLC50A1Q9BRV3 221 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 GPN1Q9HCN4 374 aaPredicted RBP13.57□□□□□ -0.24
CLN6-221ENST00000637494 UQCC1Q9NVA1 299 aa13.57□□□□□ -0.24
CLN6-221ENST00000637494 YTHDF2Q9Y5A9 579 aaKnown RBP13.57□□□□□ -0.24
CLN6-221ENST00000637494 FAM24AA6NFZ4 105 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 BOLA2-SMG1P6H3BVE0 249 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 M0R2Z0 102 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 S100A11P31949 105 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 PRR20EP86478 221 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 PRR20CP86479 221 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 PRR20DP86480 221 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 PRR20BP86481 221 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 PRR20AP86496 221 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 OR8A1Q8NGG7 326 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 ENKURQ8TC29 256 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 FAM210BQ96KR6 192 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 MGST2Q99735 147 aa13.56□□□□□ -0.24
CLN6-221ENST00000637494 SULT1A1P50225 295 aa13.55□□□□□ -0.24
CLN6-221ENST00000637494 DAD1P61803 113 aa13.55□□□□□ -0.24
CLN6-221ENST00000637494 ASAH1Q13510 395 aa13.55□□□□□ -0.24
CLN6-221ENST00000637494 OXA1LQ15070 435 aa13.55□□□□□ -0.24
CLN6-221ENST00000637494 NRARPQ7Z6K4 114 aa13.55□□□□□ -0.24
CLN6-221ENST00000637494 RPUSD4Q96CM3 377 aaKnown RBP13.55□□□□□ -0.24
CLN6-221ENST00000637494 PFDN5Q99471 154 aa13.55□□□□□ -0.24
CLN6-221ENST00000637494 DNAJC4Q9NNZ3 241 aa13.55□□□□□ -0.24
CLN6-221ENST00000637494 LYRM2Q9NU23 88 aaPredicted RBP13.55□□□□□ -0.24
CLN6-221ENST00000637494 EPPK1P58107 5090 aaKnown RBP13.55□□□□□ -0.24
CLN6-221ENST00000637494 BAXQ07812 192 aa13.54□□□□□ -0.24
CLN6-221ENST00000637494 RLN2P04090 185 aa13.53□□□□□ -0.24
CLN6-221ENST00000637494 HTN3P15516 51 aa13.53□□□□□ -0.24
CLN6-221ENST00000637494 RAB32Q13637 225 aa13.53□□□□□ -0.24
CLN6-221ENST00000637494 ATP6V1FQ16864 119 aa13.53□□□□□ -0.24
CLN6-221ENST00000637494 BAP18Q8IXM2 172 aa13.53□□□□□ -0.24
CLN6-221ENST00000637494 TMEM256Q8N2U0 113 aa13.53□□□□□ -0.24
CLN6-221ENST00000637494 ZNF331Q9NQX6 463 aaPredicted RBP13.53□□□□□ -0.24
CLN6-221ENST00000637494 WDR83OSQ9Y284 106 aa13.53□□□□□ -0.24
CLN6-221ENST00000637494 PXMP4Q9Y6I8 212 aa13.53□□□□□ -0.24
CLN6-221ENST00000637494 UBE2L5PA0A1B0GUS4 154 aa13.52□□□□□ -0.25
CLN6-221ENST00000637494 MRPS12O15235 138 aaKnown RBP13.52□□□□□ -0.25
CLN6-221ENST00000637494 MIC13Q5XKP0 118 aa13.52□□□□□ -0.25
CLN6-221ENST00000637494 TMEM252Q8N6L7 170 aa13.52□□□□□ -0.25
CLN6-221ENST00000637494 OR10J6PQ8NGY7 276 aa13.52□□□□□ -0.25
CLN6-221ENST00000637494 TMEM37Q8WXS4 190 aa13.52□□□□□ -0.25
CLN6-221ENST00000637494 LINC01587Q99440 93 aa13.52□□□□□ -0.25
CLN6-221ENST00000637494 C11orf1Q9H5F2 150 aa13.52□□□□□ -0.25
CLN6-221ENST00000637494 TRAV12-2A0A075B6T6 113 aa13.51□□□□□ -0.25
CLN6-221ENST00000637494 LYRM9A8MSI8 78 aa13.51□□□□□ -0.25
CLN6-221ENST00000637494 ZNF705GA8MUZ8 300 aaPredicted RBP13.51□□□□□ -0.25
CLN6-221ENST00000637494 CRXO43186 299 aaPredicted RBP13.51□□□□□ -0.25
CLN6-221ENST00000637494 CDKN1BP46527 198 aa13.51□□□□□ -0.25
CLN6-221ENST00000637494 RPL29P47914 159 aaKnown RBP13.51□□□□□ -0.25
CLN6-221ENST00000637494 OPCMLQ14982 345 aa13.51□□□□□ -0.25
CLN6-221ENST00000637494 GUK1Q16774 197 aa13.51□□□□□ -0.25
CLN6-221ENST00000637494 VWC2Q2TAL6 325 aa13.51□□□□□ -0.25
CLN6-221ENST00000637494 UBE2DNLQ8IWF7 75 aa13.51□□□□□ -0.25
CLN6-221ENST00000637494 POM121L12Q8N7R1 296 aa13.51□□□□□ -0.25
CLN6-221ENST00000637494 UPK1BO75841 260 aa13.5□□□□□ -0.25
CLN6-221ENST00000637494 SNRPCP09234 159 aaKnown RBP13.5□□□□□ -0.25
CLN6-221ENST00000637494 FGF7P21781 194 aa13.5□□□□□ -0.25
CLN6-221ENST00000637494 TSPOP30536 169 aa13.5□□□□□ -0.25
CLN6-221ENST00000637494 BIRC6Q9NR09 4857 aa13.49□□□□□ -0.25
CLN6-221ENST00000637494 IGSF23A1L1A6 192 aa13.49□□□□□ -0.25
CLN6-221ENST00000637494 PRAF2O60831 178 aa13.49□□□□□ -0.25
CLN6-221ENST00000637494 MPDU1O75352 247 aa13.49□□□□□ -0.25
CLN6-221ENST00000637494 IL15RAQ13261 267 aa13.49□□□□□ -0.25
CLN6-221ENST00000637494 SLC25A31Q9H0C2 315 aa13.49□□□□□ -0.25
CLN6-221ENST00000637494 SLC39A9Q9NUM3 307 aa13.49□□□□□ -0.25
CLN6-221ENST00000637494 PLA2G2EQ9NZK7 142 aa13.49□□□□□ -0.25
CLN6-221ENST00000637494 H3BTX0 84 aa13.48□□□□□ -0.25
CLN6-221ENST00000637494 IGLC2P0DOY2 106 aa13.48□□□□□ -0.25
CLN6-221ENST00000637494 HTN1P15515 57 aa13.48□□□□□ -0.25
CLN6-221ENST00000637494 TAS2R60P59551 318 aa13.48□□□□□ -0.25
CLN6-221ENST00000637494 CYCSP99999 105 aaKnown RBP13.48□□□□□ -0.25
CLN6-221ENST00000637494 E5RGE8 158 aa13.47□□□□□ -0.25
CLN6-221ENST00000637494 MORN5Q5VZ52 161 aa13.47□□□□□ -0.25
CLN6-221ENST00000637494 CHAC2Q8WUX2 184 aa13.47□□□□□ -0.25
CLN6-221ENST00000637494 C16orf74Q96GX8 76 aa13.47□□□□□ -0.25
CLN6-221ENST00000637494 C20orf144Q9BQM9 153 aa13.47□□□□□ -0.25
CLN6-221ENST00000637494 PTTG2Q9NZH5 202 aa13.47□□□□□ -0.25
CLN6-221ENST00000637494 H7BYZ3 331 aa13.46□□□□□ -0.25
CLN6-221ENST00000637494 SLC17A3O00476 420 aa13.46□□□□□ -0.25
CLN6-221ENST00000637494 DEFB130BP0DP73 79 aa13.46□□□□□ -0.25
CLN6-221ENST00000637494 DEFB130AP0DP74 79 aa13.46□□□□□ -0.25
CLN6-221ENST00000637494 NMES1Q9C002 83 aa13.46□□□□□ -0.25
CLN6-221ENST00000637494 TRAV5A0A0B4J249 113 aa13.45□□□□□ -0.26
CLN6-221ENST00000637494 INMT-MINDY4F8WBC2 141 aa13.45□□□□□ -0.26
CLN6-221ENST00000637494 H3BQ15 152 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms