RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 S100A10P60903 97 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 B2MP61769 119 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 RAB32Q13637 225 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 PSG3Q16557 428 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 RRN3P1Q2M238 152 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 LCN15Q6UWW0 184 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 STX12Q86Y82 276 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 TMEM37Q8WXS4 190 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 WDR83OSQ9Y284 106 aa13.05□□□□□ -0.32
VCX3A-203ENST00000612369 KMT2AQ03164 3969 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 IGHV4-4A0A075B6R2 117 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 HBG1P69891 147 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 HBG2P69892 147 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 ATP6V1FQ16864 119 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 C10orf113Q5VZT2 155 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 NRARPQ7Z6K4 114 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 RPP25LQ8N5L8 163 aaKnown RBP13.04□□□□□ -0.32
VCX3A-203ENST00000612369 TMEM252Q8N6L7 170 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 SLC50A1Q9BRV3 221 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 TMEM208Q9BTX3 173 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 DNAJC4Q9NNZ3 241 aa13.04□□□□□ -0.32
VCX3A-203ENST00000612369 INSP01308 110 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 EMP1P54849 157 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 PRR20EP86478 221 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 PRR20CP86479 221 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 PRR20DP86480 221 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 PRR20BP86481 221 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 PRR20AP86496 221 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 OXA1LQ15070 435 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 ZNF767PQ75MW2 155 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 OR8A1Q8NGG7 326 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 OR1L4Q8NGR5 311 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 CHAC2Q8WUX2 184 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 PFDN5Q99471 154 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 DKK2Q9UBU2 259 aa13.03□□□□□ -0.32
VCX3A-203ENST00000612369 LOC102723971A0A1B0GUV8 181 aa13.02□□□□□ -0.33
VCX3A-203ENST00000612369 PRAF2O60831 178 aa13.02□□□□□ -0.33
VCX3A-203ENST00000612369 RPL29P47914 159 aaKnown RBP13.02□□□□□ -0.33
VCX3A-203ENST00000612369 SPINK13Q1W4C9 94 aa13.02□□□□□ -0.33
VCX3A-203ENST00000612369 NIPSNAP3BQ9BS92 247 aa13.02□□□□□ -0.33
VCX3A-203ENST00000612369 ZNF331Q9NQX6 463 aaPredicted RBP13.02□□□□□ -0.33
VCX3A-203ENST00000612369 IGSF23A1L1A6 192 aa13.01□□□□□ -0.33
VCX3A-203ENST00000612369 BOLA2-SMG1P6H3BVE0 249 aa13.01□□□□□ -0.33
VCX3A-203ENST00000612369 M0R2Z0 102 aa13.01□□□□□ -0.33
VCX3A-203ENST00000612369 CRXO43186 299 aaPredicted RBP13.01□□□□□ -0.33
VCX3A-203ENST00000612369 RLN2P04090 185 aa13.01□□□□□ -0.33
VCX3A-203ENST00000612369 HIST1H1AQ02539 215 aaPredicted RBP13.01□□□□□ -0.33
VCX3A-203ENST00000612369 OPCMLQ14982 345 aa13.01□□□□□ -0.33
VCX3A-203ENST00000612369 FAM222AQ5U5X8 452 aa13.01□□□□□ -0.33
VCX3A-203ENST00000612369 MIC13Q5XKP0 118 aa13.01□□□□□ -0.33
VCX3A-203ENST00000612369 RPUSD4Q96CM3 377 aaKnown RBP13.01□□□□□ -0.33
VCX3A-203ENST00000612369 FAM210BQ96KR6 192 aa13.01□□□□□ -0.33
VCX3A-203ENST00000612369 PPP1R14DQ9NXH3 145 aa13.01□□□□□ -0.33
VCX3A-203ENST00000612369 MPDU1O75352 247 aa13□□□□□ -0.33
VCX3A-203ENST00000612369 RHOBP62745 196 aa13□□□□□ -0.33
VCX3A-203ENST00000612369 CYCSP99999 105 aaKnown RBP13□□□□□ -0.33
VCX3A-203ENST00000612369 BAXQ07812 192 aa13□□□□□ -0.33
VCX3A-203ENST00000612369 GUK1Q16774 197 aa13□□□□□ -0.33
VCX3A-203ENST00000612369 NDUFAF3Q9BU61 184 aa13□□□□□ -0.33
VCX3A-203ENST00000612369 NMES1Q9C002 83 aa13□□□□□ -0.33
VCX3A-203ENST00000612369 YTHDF2Q9Y5A9 579 aaKnown RBP13□□□□□ -0.33
VCX3A-203ENST00000612369 PXMP4Q9Y6I8 212 aa13□□□□□ -0.33
VCX3A-203ENST00000612369 VPS13DQ5THJ4 4388 aa12.99□□□□□ -0.33
VCX3A-203ENST00000612369 UBE2L5PA0A1B0GUS4 154 aa12.99□□□□□ -0.33
VCX3A-203ENST00000612369 INMT-MINDY4F8WBC2 141 aa12.99□□□□□ -0.33
VCX3A-203ENST00000612369 IGLC2P0DOY2 106 aa12.99□□□□□ -0.33
VCX3A-203ENST00000612369 TSPOP30536 169 aa12.99□□□□□ -0.33
VCX3A-203ENST00000612369 IFITM3Q01628 133 aa12.99□□□□□ -0.33
VCX3A-203ENST00000612369 TMEM256Q8N2U0 113 aa12.99□□□□□ -0.33
VCX3A-203ENST00000612369 SLC39A9Q9NUM3 307 aa12.99□□□□□ -0.33
VCX3A-203ENST00000612369 BIRC6Q9NR09 4857 aa12.98□□□□□ -0.33
VCX3A-203ENST00000612369 E5RGE8 158 aa12.98□□□□□ -0.33
VCX3A-203ENST00000612369 DEFA1P59665 94 aa12.98□□□□□ -0.33
VCX3A-203ENST00000612369 DEFA3P59666 94 aa12.98□□□□□ -0.33
VCX3A-203ENST00000612369 MORN5Q5VZ52 161 aa12.98□□□□□ -0.33
VCX3A-203ENST00000612369 SAT2Q96F10 170 aaPredicted RBP12.98□□□□□ -0.33
VCX3A-203ENST00000612369 MARVELD1Q9BSK0 173 aa12.98□□□□□ -0.33
VCX3A-203ENST00000612369 SLC25A31Q9H0C2 315 aa12.98□□□□□ -0.33
VCX3A-203ENST00000612369 P0DMU3 169 aa12.97□□□□□ -0.33
VCX3A-203ENST00000612369 FAM231AP0DMU4 169 aa12.97□□□□□ -0.33
VCX3A-203ENST00000612369 FAM231CP0DMU5 169 aa12.97□□□□□ -0.33
VCX3A-203ENST00000612369 FGF7P21781 194 aa12.97□□□□□ -0.33
VCX3A-203ENST00000612369 CDKN1BP46527 198 aa12.97□□□□□ -0.33
VCX3A-203ENST00000612369 BAP18Q8IXM2 172 aa12.97□□□□□ -0.33
VCX3A-203ENST00000612369 TRAV12-2A0A075B6T6 113 aa12.96□□□□□ -0.33
VCX3A-203ENST00000612369 LYRM9A8MSI8 78 aa12.96□□□□□ -0.33
VCX3A-203ENST00000612369 H3BQ15 152 aa12.96□□□□□ -0.33
VCX3A-203ENST00000612369 ZNF253O75346 499 aa12.96□□□□□ -0.33
VCX3A-203ENST00000612369 SIX6O95475 246 aa12.96□□□□□ -0.33
VCX3A-203ENST00000612369 OR10J6PQ8NGY7 276 aa12.96□□□□□ -0.33
VCX3A-203ENST00000612369 BATF3Q9NR55 127 aa12.96□□□□□ -0.33
VCX3A-203ENST00000612369 TRAV5A0A0B4J249 113 aa12.95□□□□□ -0.34
VCX3A-203ENST00000612369 ZNF705GA8MUZ8 300 aaPredicted RBP12.95□□□□□ -0.34
VCX3A-203ENST00000612369 SLC17A3O00476 420 aa12.95□□□□□ -0.34
VCX3A-203ENST00000612369 SNRPCP09234 159 aaKnown RBP12.95□□□□□ -0.34
VCX3A-203ENST00000612369 TAS2R60P59551 318 aa12.95□□□□□ -0.34
VCX3A-203ENST00000612369 DAD1P61803 113 aa12.95□□□□□ -0.34
VCX3A-203ENST00000612369 NHLH2Q02577 135 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms