RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 SELENOKQ9Y6D0 94 aa6.55□□□□□ -1.36
TRIM28-214ENST00000600840 DNAH7Q8WXX0 4024 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 CXorf65A6NEN9 183 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 FAM74A7A6NL05 159 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 ZNF785A8K8V0 405 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 MRPS12O15235 138 aaKnown RBP6.54□□□□□ -1.36
TRIM28-214ENST00000600840 MT-ND4LP03901 98 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 FABP1P07148 127 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 NPPCP23582 126 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 RAB5BP61020 215 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 FAM74A3Q4VXF1 159 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 GCSAMLQ5JQS6 135 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 MORN5Q5VZ52 161 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 C16orf54Q6UWD8 224 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 ZNF709Q8N972 641 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 GLMPQ8WWB7 406 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 C20orf24Q9BUV8 137 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 ELOVL1Q9BW60 279 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 SCRT1Q9BWW7 348 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 SH3BGRL3Q9H299 93 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 SLC39A9Q9NUM3 307 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 TECRQ9NZ01 308 aaKnown RBP6.54□□□□□ -1.36
TRIM28-214ENST00000600840 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
TRIM28-214ENST00000600840 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 A8MZ25 164 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 H3BRN7 92 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 SCGB2A1O75556 95 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 B2MP61769 119 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 SRSF3P84103 164 aaKnown RBP6.53□□□□□ -1.36
TRIM28-214ENST00000600840 RAB31Q13636 194 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 RNF2Q99496 336 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 TXNDC17Q9BRA2 123 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 NIPSNAP3BQ9BS92 247 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 SHANK2-AS3Q9BTD1 123 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 RHPN1-AS1Q9BWJ2 59 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 TMEM231Q9H6L2 316 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 EDA2RQ9HAV5 297 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 RETNQ9HD89 108 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 DNAJC4Q9NNZ3 241 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 BIN3Q9NQY0 253 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 PXMP4Q9Y6I8 212 aa6.53□□□□□ -1.36
TRIM28-214ENST00000600840 IGHV3OR16-13A0A075B7E8 117 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 ELOA3CA0A087WX78 387 aaPredicted RBP6.52□□□□□ -1.37
TRIM28-214ENST00000600840 IGHV3-74A0A0B4J1X5 117 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 C7orf77A4D0Y5 90 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 ZNF98A6NK75 572 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 C1orf196B1AJZ1 125 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 M0R036 132 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 HYPMO75409 117 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 OR5G3P0C626 314 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 ORM2P19652 201 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 LYZP61626 148 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 HAGHQ16775 308 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 C1orf194Q5T5A4 169 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 RPP25LQ8N5L8 163 aaKnown RBP6.52□□□□□ -1.37
TRIM28-214ENST00000600840 OR1B1Q8NGR6 318 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 GATAD1Q8WUU5 269 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 SFT2D1Q8WV19 159 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 FAM167A-AS1Q96KT0 104 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 UHRF2Q96PU4 802 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 SLC25A39Q9BZJ4 359 aaPredicted RBP6.52□□□□□ -1.37
TRIM28-214ENST00000600840 WFDC10AQ9H1F0 79 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 ZMAT4Q9H898 229 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 SEPSECSQ9HD40 501 aaKnown RBP6.52□□□□□ -1.37
TRIM28-214ENST00000600840 RPS10P5Q9NQ39 176 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 MANBALQ9NQG1 85 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 TMEM242Q9NWH2 141 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 RABAC1Q9UI14 185 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 VAX2Q9UIW0 290 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 HERC2O95714 4834 aa6.52□□□□□ -1.37
TRIM28-214ENST00000600840 TRAV5A0A0B4J249 113 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 IGHV3-66A0A0C4DH42 116 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 CTXND1A0A1B0GTU2 59 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 TMEM250H0YL14 139 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 SRP19P09132 144 aaKnown RBP6.51□□□□□ -1.37
TRIM28-214ENST00000600840 CD7P09564 240 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 BCL2P10415 239 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 ACOT6Q3I5F7 207 aaPredicted RBP6.51□□□□□ -1.37
TRIM28-214ENST00000600840 CD300EQ496F6 205 aaPredicted RBP6.51□□□□□ -1.37
TRIM28-214ENST00000600840 SPATA31B1PQ5VZV4 182 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 LEMD1Q68G75 181 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 LINC00322Q6ZN03 302 aaPredicted RBP6.51□□□□□ -1.37
TRIM28-214ENST00000600840 TMEM61Q8N0U2 210 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 OR2K2Q8NGT1 345 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 TVP23CQ96ET8 276 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 ZNF503Q96F45 646 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 METTL26Q96S19 204 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 TCEAL7Q9BRU2 100 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 ACTR3CQ9C0K3 210 aaPredicted RBP6.51□□□□□ -1.37
TRIM28-214ENST00000600840 RPRMQ9NS64 109 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 DOK5Q9P104 306 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 HIGD1AQ9Y241 93 aa6.51□□□□□ -1.37
TRIM28-214ENST00000600840 TRAV25A0A0B4J276 109 aa6.5□□□□□ -1.37
TRIM28-214ENST00000600840 SOCS3O14543 225 aa6.5□□□□□ -1.37
TRIM28-214ENST00000600840 PSMB3P49720 205 aa6.5□□□□□ -1.37
TRIM28-214ENST00000600840 FHITP49789 147 aa6.5□□□□□ -1.37
TRIM28-214ENST00000600840 ICAM4Q14773 271 aa6.5□□□□□ -1.37
TRIM28-214ENST00000600840 ZNF726P1Q15940 193 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms