RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 IGHV3OR16-8A0A075B7F1 116 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 TGIF2-C20orf24A0A0A6YYL0 155 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 CLPSL1A2RUU4 121 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 MRPS12O15235 138 aaKnown RBP13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 NDUFB4O95168 129 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 RPL7P18124 248 aaKnown RBP13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 KLHDC1Q8N7A1 406 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 UBE2E2Q96LR5 201 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 ZNF586Q9NXT0 402 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 SCO2A0A1W2PP80 73 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 TSTD3H0UI37 97 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 TRGC2P03986 189 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 IGLC2P0DOY2 106 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 RANP62826 216 aaKnown RBP13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 GPR61Q9BZJ8 451 aa13.58□□□□□ -0.24
SHKBP1-224ENST00000600718 SNRPCP09234 159 aaKnown RBP13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 CRYBB3P26998 211 aa13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 DDTP30046 118 aa13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 MYCNOSP40205 109 aa13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 PNRC1Q12796 327 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 TMEM241Q24JQ0 296 aa13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 LBHQ53QV2 105 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 C1orf194Q5T5A4 169 aa13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 Q71RC1 249 aaPredicted RBP13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 OR8I2Q8N0Y5 310 aa13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 C16orf95Q9H693 158 aa13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 NAT8Q9UHE5 227 aa13.57□□□□□ -0.24
SHKBP1-224ENST00000600718 INAFM1C9JVW0 142 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 BUB3O43684 328 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 TMEM190Q8WZ59 177 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 OR5B12Q96R08 314 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 ELOVL1Q9BW60 279 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 SDF2L1Q9HCN8 221 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 URGCP-MRPS24S4R325 110 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 U3KQE9 123 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 TRBV19A0A075B6N1 114 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 LGALS1P09382 135 aaKnown RBP13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 TRGC1P0CF51 173 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 FAM210BQ96KR6 192 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 GPR82Q96P67 336 aa13.56□□□□□ -0.24
SHKBP1-224ENST00000600718 ACANP16112 2415 aa13.55□□□□□ -0.24
SHKBP1-224ENST00000600718 PGPA6NDG6 321 aa13.55□□□□□ -0.24
SHKBP1-224ENST00000600718 TAS2R60P59551 318 aa13.55□□□□□ -0.24
SHKBP1-224ENST00000600718 LYPD1Q8N2G4 141 aa13.55□□□□□ -0.24
SHKBP1-224ENST00000600718 TLN2Q9Y4G6 2542 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 A0A1B0GV90 55 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 FAM106AQ4KMX7 169 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 GFI1BQ5VTD9 330 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 UNQ9165/PRO28630Q6UXU0 137 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 GPHB5Q86YW7 130 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 FRZBQ92765 325 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 Q9H3A6 140 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 OTORQ9NRC9 128 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 H3BTX0 84 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 PDE6HQ13956 83 aa13.54□□□□□ -0.24
SHKBP1-224ENST00000600718 OTOGQ6ZRI0 2925 aa13.53□□□□□ -0.24
SHKBP1-224ENST00000600718 TRBV24-1A0A075B6N3 115 aa13.53□□□□□ -0.24
SHKBP1-224ENST00000600718 PHOX2AO14813 284 aa13.53□□□□□ -0.24
SHKBP1-224ENST00000600718 ZNF207O43670 478 aaKnown RBP13.53□□□□□ -0.24
SHKBP1-224ENST00000600718 FABP4P15090 132 aa13.53□□□□□ -0.24
SHKBP1-224ENST00000600718 PACRGQ96M98 296 aaPredicted RBP13.53□□□□□ -0.24
SHKBP1-224ENST00000600718 C17orf77Q96MU5 243 aa13.53□□□□□ -0.24
SHKBP1-224ENST00000600718 DERL1Q9BUN8 251 aa13.53□□□□□ -0.24
SHKBP1-224ENST00000600718 EPDR1Q9UM22 224 aa13.53□□□□□ -0.24
SHKBP1-224ENST00000600718 ZNF320A2RRD8 509 aa13.52□□□□□ -0.24
SHKBP1-224ENST00000600718 HELTA6NFD8 242 aa13.52□□□□□ -0.24
SHKBP1-224ENST00000600718 SLC25A5P05141 298 aaKnown RBP13.52□□□□□ -0.24
SHKBP1-224ENST00000600718 ZNF124Q15973 351 aa13.52□□□□□ -0.24
SHKBP1-224ENST00000600718 C5orf17Q8NAS9 161 aa13.52□□□□□ -0.24
SHKBP1-224ENST00000600718 C2orf88Q9BSF0 95 aa13.52□□□□□ -0.24
SHKBP1-224ENST00000600718 SMAD5-AS1Q9Y6J3 95 aa13.52□□□□□ -0.24
SHKBP1-224ENST00000600718 SONP18583 2426 aaKnown RBP13.52□□□□□ -0.25
SHKBP1-224ENST00000600718 K7EMT4 169 aa13.52□□□□□ -0.25
SHKBP1-224ENST00000600718 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
SHKBP1-224ENST00000600718 GALR1P47211 349 aa13.52□□□□□ -0.25
SHKBP1-224ENST00000600718 PDZD11Q5EBL8 140 aa13.52□□□□□ -0.25
SHKBP1-224ENST00000600718 WIPF2Q8TF74 440 aaPredicted RBP13.52□□□□□ -0.25
SHKBP1-224ENST00000600718 CTDSP1Q9GZU7 261 aa13.52□□□□□ -0.25
SHKBP1-224ENST00000600718 NOTCH2Q04721 2471 aa13.52□□□□□ -0.25
SHKBP1-224ENST00000600718 PEX7O00628 323 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 NDUFA7O95182 113 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 PSG9Q00887 426 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 RPEL1Q2QD12 228 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 C16orf54Q6UWD8 224 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 LINC01006Q8NI28 216 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 WFDC12Q8WWY7 111 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 HIST1H2BLQ99880 126 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 A0A087X0K7 114 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 A0A1W2PS18 150 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 C9JCJ5 164 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 ZNF253O75346 499 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 RPL23P62829 140 aaKnown RBP13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 TCTEX1D4Q5JR98 221 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 SIGLEC15Q6ZMC9 328 aa13.51□□□□□ -0.25
SHKBP1-224ENST00000600718 IGHV3-66A0A0C4DH42 116 aa13.5□□□□□ -0.25
SHKBP1-224ENST00000600718 ZNF785A8K8V0 405 aa13.5□□□□□ -0.25
SHKBP1-224ENST00000600718 TCF21O43680 179 aa13.5□□□□□ -0.25
SHKBP1-224ENST00000600718 CRLF1O75462 422 aa13.5□□□□□ -0.25
SHKBP1-224ENST00000600718 JOSD1Q15040 202 aaPredicted RBP13.5□□□□□ -0.25
SHKBP1-224ENST00000600718 TMEM183AQ8IXX5 376 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms