RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CNN1P51911 297 aaKnown RBP16.3■□□□□ 0.2
CCDC9-204ENST00000599398 CYCSP99999 105 aaKnown RBP16.3■□□□□ 0.2
CCDC9-204ENST00000599398 BPIFA4PQ86YQ2 179 aa16.3■□□□□ 0.2
CCDC9-204ENST00000599398 DNAJC4Q9NNZ3 241 aa16.3■□□□□ 0.2
CCDC9-204ENST00000599398 GOLT1BQ9Y3E0 138 aa16.3■□□□□ 0.2
CCDC9-204ENST00000599398 MRPS12O15235 138 aaKnown RBP16.29■□□□□ 0.2
CCDC9-204ENST00000599398 CXCL3P19876 107 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 PRR20EP86478 221 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 PRR20CP86479 221 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 PRR20DP86480 221 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 PRR20BP86481 221 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 PRR20AP86496 221 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 OPCMLQ14982 345 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 MORN5Q5VZ52 161 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 OR1L4Q8NGR5 311 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 C2CD4CQ8TF44 421 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 SLC25A31Q9H0C2 315 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 OR5AC2Q9NZP5 309 aa16.29■□□□□ 0.2
CCDC9-204ENST00000599398 ZNF705FA8MVS1 300 aaPredicted RBP16.28■□□□□ 0.2
CCDC9-204ENST00000599398 RPL29P47914 159 aaKnown RBP16.28■□□□□ 0.2
CCDC9-204ENST00000599398 B2MP61769 119 aa16.28■□□□□ 0.2
CCDC9-204ENST00000599398 NHLH2Q02577 135 aa16.28■□□□□ 0.2
CCDC9-204ENST00000599398 LCN15Q6UWW0 184 aa16.28■□□□□ 0.2
CCDC9-204ENST00000599398 PFDN5Q99471 154 aa16.28■□□□□ 0.2
CCDC9-204ENST00000599398 NEU1Q99519 415 aa16.28■□□□□ 0.2
CCDC9-204ENST00000599398 SLC39A9Q9NUM3 307 aa16.28■□□□□ 0.2
CCDC9-204ENST00000599398 CELA1Q9UNI1 258 aa16.28■□□□□ 0.2
CCDC9-204ENST00000599398 SMIM9A6NGZ8 99 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 A8MTW9 85 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 C11orf94C9JXX5 98 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 EMP1P54849 157 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 H2BFSP57053 126 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 HIST1H1AQ02539 215 aaPredicted RBP16.27■□□□□ 0.2
CCDC9-204ENST00000599398 PSG3Q16557 428 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 AMTNQ6UX39 209 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 Q6ZTC4 211 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 OR11H7Q8NGC8 314 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 OR5C1Q8NGR4 320 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 PXMP4Q9Y6I8 212 aa16.27■□□□□ 0.2
CCDC9-204ENST00000599398 H0YIZ8 118 aa16.26■□□□□ 0.19
CCDC9-204ENST00000599398 H3BTX0 84 aa16.26■□□□□ 0.19
CCDC9-204ENST00000599398 PRB4P10163 310 aaPredicted RBP16.26■□□□□ 0.19
CCDC9-204ENST00000599398 CXCL2P19875 107 aa16.26■□□□□ 0.19
CCDC9-204ENST00000599398 SPINK13Q1W4C9 94 aa16.26■□□□□ 0.19
CCDC9-204ENST00000599398 ZNF767PQ75MW2 155 aa16.26■□□□□ 0.19
CCDC9-204ENST00000599398 PPP1R1CQ8WVI7 109 aa16.26■□□□□ 0.19
CCDC9-204ENST00000599398 SLC50A1Q9BRV3 221 aa16.26■□□□□ 0.19
CCDC9-204ENST00000599398 TMEM208Q9BTX3 173 aa16.26■□□□□ 0.19
CCDC9-204ENST00000599398 RFNGQ9Y644 331 aa16.26■□□□□ 0.19
CCDC9-204ENST00000599398 TRAV5A0A0B4J249 113 aa16.25■□□□□ 0.19
CCDC9-204ENST00000599398 M0R2Z0 102 aa16.25■□□□□ 0.19
CCDC9-204ENST00000599398 MPDU1O75352 247 aa16.25■□□□□ 0.19
CCDC9-204ENST00000599398 RHOBP62745 196 aa16.25■□□□□ 0.19
CCDC9-204ENST00000599398 C1orf158Q8N1D5 194 aa16.25■□□□□ 0.19
CCDC9-204ENST00000599398 OR8A1Q8NGG7 326 aa16.25■□□□□ 0.19
CCDC9-204ENST00000599398 THAP6Q8TBB0 222 aa16.25■□□□□ 0.19
CCDC9-204ENST00000599398 RPUSD4Q96CM3 377 aaKnown RBP16.25■□□□□ 0.19
CCDC9-204ENST00000599398 IGF2BP2-AS1Q96M15 143 aa16.25■□□□□ 0.19
CCDC9-204ENST00000599398 ZNF331Q9NQX6 463 aaPredicted RBP16.25■□□□□ 0.19
CCDC9-204ENST00000599398 PPP1R14DQ9NXH3 145 aa16.25■□□□□ 0.19
CCDC9-204ENST00000599398 TRAV10A0A0B4J240 114 aa16.24■□□□□ 0.19
CCDC9-204ENST00000599398 TMEM189A5PLL7 270 aa16.24■□□□□ 0.19
CCDC9-204ENST00000599398 IGLL5B9A064 214 aa16.24■□□□□ 0.19
CCDC9-204ENST00000599398 HBE1P02100 147 aa16.24■□□□□ 0.19
CCDC9-204ENST00000599398 AMBPP02760 352 aa16.24■□□□□ 0.19
CCDC9-204ENST00000599398 CLINT1Q14677 625 aa16.24■□□□□ 0.19
CCDC9-204ENST00000599398 CHAC2Q8WUX2 184 aa16.24■□□□□ 0.19
CCDC9-204ENST00000599398 NPCDR1Q9BY65 106 aa16.24■□□□□ 0.19
CCDC9-204ENST00000599398 INSP01308 110 aa16.23■□□□□ 0.19
CCDC9-204ENST00000599398 H3BQ15 152 aa16.22■□□□□ 0.19
CCDC9-204ENST00000599398 BOLA2-SMG1P6H3BVE0 249 aa16.22■□□□□ 0.19
CCDC9-204ENST00000599398 SLC17A3O00476 420 aa16.22■□□□□ 0.19
CCDC9-204ENST00000599398 PET100P0DJ07 73 aa16.22■□□□□ 0.19
CCDC9-204ENST00000599398 IGLC2P0DOY2 106 aa16.22■□□□□ 0.19
CCDC9-204ENST00000599398 C12orf74Q32Q52 190 aa16.22■□□□□ 0.19
CCDC9-204ENST00000599398 LOC102723971A0A1B0GUV8 181 aa16.21■□□□□ 0.19
CCDC9-204ENST00000599398 MPC2O95563 127 aa16.21■□□□□ 0.19
CCDC9-204ENST00000599398 SPART-AS1P0CW21 52 aa16.21■□□□□ 0.19
CCDC9-204ENST00000599398 RRN3P1Q2M238 152 aa16.21■□□□□ 0.19
CCDC9-204ENST00000599398 BAP18Q8IXM2 172 aa16.21■□□□□ 0.19
CCDC9-204ENST00000599398 TRAV12-2A0A075B6T6 113 aa16.2■□□□□ 0.18
CCDC9-204ENST00000599398 GUK1Q16774 197 aa16.2■□□□□ 0.18
CCDC9-204ENST00000599398 DEFB131BA0A096LNP1 70 aa16.19■□□□□ 0.18
CCDC9-204ENST00000599398 CRXO43186 299 aaPredicted RBP16.19■□□□□ 0.18
CCDC9-204ENST00000599398 TCTAP57738 103 aa16.19■□□□□ 0.18
CCDC9-204ENST00000599398 GCSAMLQ5JQS6 135 aa16.19■□□□□ 0.18
CCDC9-204ENST00000599398 LGALS9CQ6DKI2 356 aa16.19■□□□□ 0.18
CCDC9-204ENST00000599398 RNF126Q9BV68 326 aa16.19■□□□□ 0.18
CCDC9-204ENST00000599398 FAM222AQ5U5X8 452 aa16.18■□□□□ 0.18
CCDC9-204ENST00000599398 OR10J6PQ8NGY7 276 aa16.18■□□□□ 0.18
CCDC9-204ENST00000599398 SAT2Q96F10 170 aaPredicted RBP16.18■□□□□ 0.18
CCDC9-204ENST00000599398 WDR61Q9GZS3 305 aaKnown RBP16.18■□□□□ 0.18
CCDC9-204ENST00000599398 ZNF586Q9NXT0 402 aa16.18■□□□□ 0.18
CCDC9-204ENST00000599398 ALG5Q9Y673 324 aa16.18■□□□□ 0.18
CCDC9-204ENST00000599398 TEX48A0A1B0GUV7 120 aa16.17■□□□□ 0.18
CCDC9-204ENST00000599398 ATP5SQ99766 215 aa16.17■□□□□ 0.18
CCDC9-204ENST00000599398 KCNIP2Q9NS61 270 aa16.17■□□□□ 0.18
CCDC9-204ENST00000599398 DKK2Q9UBU2 259 aa16.17■□□□□ 0.18
CCDC9-204ENST00000599398 APLNQ9ULZ1 77 aa16.17■□□□□ 0.18
CCDC9-204ENST00000599398 YTHDF2Q9Y5A9 579 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms